>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 455  DPANMQDILAVFTLAVICTGENPPARPTMKEVLQHLLRYD 336
            D  + +++L V  +A  C GENP  RPT ++++  L   D
Sbjct: 979  DKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENID 1018

>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -3

Query: 453 PGQHAGHPGRVHPRRD--LHG-GEPSGAADHEGGPAAP-PPVRQDVCSSRGVP 307
           PGQ+ G PG    R    L G   P GAA  +GGP AP PP  Q V   RG P
Sbjct: 814 PGQN-GEPGGKGERGPPGLRGEAGPPGAAGPQGGPGAPGPPGPQGVKGERGSP 865

>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 443  MQDILAVFTLAVICTGENPPARPTMKEVLQHL 348
            +  ++ VF +A++C  E   ARPTM+EV+  L
Sbjct: 936  LTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967

>PROB_RHOS4 (Q3IXX8) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 370

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 231 RIRHVPPPAAFLRLEQRRAAVDVVQLARL---CLSRHPVVPEEVLQDLLHGRPRRRVL 395
           R+ H+PP    L   Q  AAV  ++LAR     L+ H +   +VL  L     RRR L
Sbjct: 64  RVLHLPPGPLALEQSQAAAAVGQIRLARAYEEVLAPHGITTAQVLVTLEDTEDRRRYL 121

>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)|
          Length = 250

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 432 PGRVHPRRDLHGGEPSGAADHEGGPAAPPP 343
           PG   P R  HG EPSG   H G P  P P
Sbjct: 69  PGSALPARG-HGQEPSGPGSHYGAPGEPCP 97

>PROB_AGRT5 (Q8UBS0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 389

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +3

Query: 252 PAAFLRLEQRRAAVDVVQLARL-----CLSRHPVVPEEVLQDLLHGRPRRRVL 395
           P+  L+LE+ +AA  V Q+A        LSRH +V  ++L  L     RRR L
Sbjct: 70  PSGALKLEESQAAAAVGQIALARAWSESLSRHEIVAGQILLTLSDTEERRRYL 122

>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -3

Query: 444  HAGHPGRVHPRRDLHGGEPSGAADHEGGPAAPPPVRQDVCSSRGVP 307
            HA       PR +    +PSGA     G  A PP    + SS G+P
Sbjct: 990  HASKGAPHLPRSNPGSSQPSGAGTSNSGSGALPPYAPKLSSSAGLP 1035

>SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-) (hSIRT1)|
           (hSIR2) (SIR2-like protein 1)
          Length = 747

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 5/35 (14%)
 Frame = -3

Query: 441 AGHPGRVHPRRDLHG-----GEPSGAADHEGGPAA 352
           AG P R  PRRD  G     GEP GAA     PAA
Sbjct: 29  AGEPLRKRPRRDGPGLERSPGEPGGAAPEREVPAA 63

>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC|
           2.7.11.1)
          Length = 817

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 452 PANMQDILAVFTLAVICTGENPPARPTMKEVLQHLLRYD 336
           P N      +  LAV C  E+   RPTM+  +Q LL  D
Sbjct: 778 PVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTLLSAD 816

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = -3

Query: 447  QHAGHPGRVHPRRDLHGGEPSGA-ADHEGGPAAPPPVRQDVCSSRGVP 307
            Q+   P   HP   LH   P    A H   P  PPP+    C S   P
Sbjct: 1011 QNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTP 1058

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = -3

Query: 453 PGQHAGHPG----RVHPRRDLHGGEPSGAADHEGGPAAPPPVRQDVCSSRGVP 307
           PGQ+ G PG    R  P     GG P  A    G   A PP  Q V   RG P
Sbjct: 814 PGQN-GEPGAKGERGAPGEKGEGGPPGAAGPPGGSGPAGPPGPQGVKGERGSP 865

>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = -3

Query: 453 PGQHAGHPG----RVHPRRDLHGGEPSGAADHEGGPAAPPPVRQDVCSSRGVP 307
           PGQ+ G PG    R  P     GG P  A    G   A PP  Q V   RG P
Sbjct: 659 PGQN-GEPGAKGERGAPGEKGEGGPPGAAGPAGGSGPAGPPGPQGVKGERGSP 710

>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG)
          Length = 525

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
 Frame = -3

Query: 444 HAGHPGRVHPRRDLHGGEPSGAADH-----EGGPAAPPPVRQDVC 325
           H  HP   HP    HG  P G   H     + GP  PPP  Q  C
Sbjct: 387 HGHHPHGHHP----HGHHPHGHHPHCHDFQDYGPCDPPPHNQGHC 427

>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -3

Query: 453 PGQHAGHPGRVHPRRDLHGGEPSGAADHEGGPAAPP 346
           PG H G P    P+     G P G    +GGP  PP
Sbjct: 92  PGHHHGPPPSGGPQTSSQPGNPQGPPP-QGGPQGPP 126

>PDC_ASPPA (P51844) Pyruvate decarboxylase (EC 4.1.1.1)|
          Length = 577

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
 Frame = +3

Query: 300 VQLARLCLSRHPVVPEEV----LQDLLHGRPRRRVLP 398
           V +A++ LS H   P E+    LQ LLH RP R  +P
Sbjct: 133 VTVAQVSLSDHRTAPSEIDRILLQCLLHSRPVRIAIP 169

>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 446  NMQDILAVFTLAVICTGENPPARPTMKEVLQHL 348
            N +++  V  +A +C  ENP  RPT ++++  L
Sbjct: 973  NDKEMFRVLEIACLCLSENPKQRPTTQQLVSWL 1005

>LDH_BOTBR (P93052) L-lactate dehydrogenase (EC 1.1.1.27) (LDH)|
          Length = 316

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 381 RRRVLPRADHGEGEHGQDVLHVG 449
           ++R+LP A H  GE+G D L+VG
Sbjct: 246 QKRILPAAAHLSGEYGIDNLYVG 268

>DNAA_STRCO (P27902) Chromosomal replication initiator protein dnaA|
          Length = 656

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -3

Query: 447 QHAGHPGRVHPRRDLHGGEPSGAADHEGGPAAPPP 343
           Q  G   +  PRRDL    P     H GGP  P P
Sbjct: 258 QQRGDYDQRGPRRDLPEPPPGSGHVHRGGPVGPGP 292

>PRB4M_HUMAN (P10161) Basic salivary proline-rich protein 4 allele M (Salivary|
           proline-rich protein Po) (Parotid o protein) [Contains:
           Peptide P-D] (Fragment)
          Length = 238

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 453 PGQHAGHPGRVHPRRDLHGGEPSGAADHEGGPAAPPPVRQDVCSSRGVP 307
           P  H G P R  P+    G +  G   H G P  PPP  Q    S+G P
Sbjct: 41  PPPHPGKPERPPPQG---GNQSQGPPPHPGKPERPPP--QGGNQSQGPP 84

>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)|
            (Ataxin-2-related protein)
          Length = 1075

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 7/34 (20%)
 Frame = -3

Query: 435  HPGRVHPRRDL-------HGGEPSGAADHEGGPA 355
            HPG  HP + +       HGG P GA    G PA
Sbjct: 979  HPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA 1012

>DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)|
          Length = 710

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -3

Query: 444 HAGHPGRVHPRRDLHGGEPSGAADHEGGPAAPPPVRQD 331
           H GH  +    R+     P G A H G PA P P + D
Sbjct: 655 HLGHLAKAFGLRE----RPKGMAAHRGKPATPKPKQDD 688

>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)|
          Length = 410

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 458 RDPANMQDILAVFTLAVICTGENPPARPTMKEVLQHLLRYDRMSA 324
           +D  +M++   V TL++ C       RP M EV+ HL     ++A
Sbjct: 314 QDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNA 358


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,122,272
Number of Sequences: 219361
Number of extensions: 830958
Number of successful extensions: 3084
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3072
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)