ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477026.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.001
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.001
3dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.001
4dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.001
5dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.001
6emb|BX323992.9| Zebrafish DNA sequence from clone DKEY-185B14 in... 40 0.33
7gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, comp... 40 0.33
8gb|AC016622.5|AC016622 Homo sapiens chromosome 5 clone CTD-2343F... 40 0.33
9gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O... 40 0.33
10emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 40 0.33
11ref|XM_705667.1| Candida albicans SC5314 hypothetical protein (C... 38 1.3
12ref|XM_705629.1| Candida albicans SC5314 hypothetical protein (C... 38 1.3
13emb|CR933791.16| Zebrafish DNA sequence from clone DKEYP-101F6 i... 38 1.3
14gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosom... 38 1.3
15gb|AF039712.1| Caenorhabditis elegans cosmid F54D7, complete seq... 38 1.3
16emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 i... 38 1.3
17dbj|AK134512.1| Mus musculus 11 days embryo head cDNA, RIKEN ful... 38 1.3
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 1.3
19emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15,... 38 1.3
20emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chr... 38 1.3
21gb|U95550.1|U95550 Candida albicans TATA-binding protein (TBP) m... 38 1.3
22gb|U95549.1|U95549 Candida albicans TATA-binding protein (TBP) g... 38 1.3
23gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 1.3
24emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa... 38 1.3
25gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl... 38 1.3
26gb|AC149401.2| Phakopsora pachyrhizi clone JGIAFNA-61H17, comple... 36 5.1
27gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, comple... 36 5.1
28ref|XM_631875.1| Dictyostelium discoideum hypothetical protein (... 36 5.1
29gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome... 36 5.1
30gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome... 36 5.1
31gb|AF025458.1| Caenorhabditis elegans cosmid C01B12, complete se... 36 5.1
32emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 i... 36 5.1
33emb|BX088712.23| Zebrafish DNA sequence from clone CH211-199H2 i... 36 5.1
34gb|AC009449.7| Homo sapiens chromosome 17, clone CTD-2291H15, co... 36 5.1
35ref|XM_812476.1| Trypanosoma cruzi strain CL Brener endosomal tr... 36 5.1
36gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosom... 36 5.1
37ref|XM_813999.1| Trypanosoma cruzi strain CL Brener endosomal tr... 36 5.1
38ref|XM_760720.1| Theileria parva strain Muguga chromosome 1 hypo... 36 5.1
39gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence 36 5.1
40ref|XM_660401.1| Cryptosporidium hominis TU502 lectin-domain pro... 36 5.1
41gb|AC146759.29| Medicago truncatula clone mth2-173e19, complete ... 36 5.1
42gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome... 36 5.1
43gb|AC144842.2| Homo sapiens chromosome 17, clone XXfos-801612G12... 36 5.1
44emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete se... 36 5.1
45gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, com... 36 5.1
46gb|AC123593.1| Genomic sequence for Medicago truncatula, clone M... 36 5.1
47emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in ... 36 5.1
48dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 36 5.1
49gb|AF047655.1| Caenorhabditis elegans cosmid C17B7, complete seq... 36 5.1
50emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in... 36 5.1
51emb|BX255928.7| Zebrafish DNA sequence from clone DKEY-257P9 in ... 36 5.1
52gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Canc... 36 5.1
53ref|XM_627836.1| Cryptosporidium parvum Iowa II ERGIC-53-like ma... 36 5.1
54gb|AC120137.16| Mus musculus chromosome 5, clone RP23-280O16, co... 36 5.1
55gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 36 5.1
56dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 5.1
57gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, co... 36 5.1
58gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, comple... 36 5.1
59gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, co... 36 5.1
60gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, c... 36 5.1
61gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305... 36 5.1
62gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E... 36 5.1
63emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 ... 36 5.1
64emb|Z68105.1|CEF13E6 Caenorhabditis elegans Cosmid F13E6, comple... 36 5.1
65dbj|D26535.1|HUMDS Homo sapiens gene for dihydrolipoamide succin... 36 5.1
66gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 36 5.1
67emb|BX004975.9| Zebrafish DNA sequence from clone DKEY-14B16, co... 36 5.1
68emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chr... 36 5.1 
>ref|XM_477026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3193

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 11   tgtggttccaaatcaaccaaaaattgtt 38
            |||||||||||||||| |||||||||||
Sbjct: 3098 tgtggttccaaatcaatcaaaaattgtt 3071
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 11      tgtggttccaaatcaaccaaaaattgtt 38
               |||||||||||||||| |||||||||||
Sbjct: 5491606 tgtggttccaaatcaatcaaaaattgtt 5491579
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0081K20
          Length = 117287

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 11   tgtggttccaaatcaaccaaaaattgtt 38
            |||||||||||||||| |||||||||||
Sbjct: 4691 tgtggttccaaatcaatcaaaaattgtt 4664
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 11     tgtggttccaaatcaaccaaaaattgtt 38
              |||||||||||||||| |||||||||||
Sbjct: 125587 tgtggttccaaatcaatcaaaaattgtt 125560
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>dbj|AK100095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004B12, full
            insert sequence
          Length = 3193

 Score = 48.1 bits (24), Expect = 0.001
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 11   tgtggttccaaatcaaccaaaaattgtt 38
            |||||||||||||||| |||||||||||
Sbjct: 3098 tgtggttccaaatcaatcaaaaattgtt 3071
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>emb|BX323992.9| Zebrafish DNA sequence from clone DKEY-185B14 in linkage group 12,
             complete sequence
          Length = 153572

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    caaatcaaccaaaaattgtt 38
             ||||||||||||||||||||
Sbjct: 48507 caaatcaaccaaaaattgtt 48488
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>gb|AC008829.7| Homo sapiens chromosome 5 clone CTD-2140K22, complete sequence
          Length = 159145

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     caaccaaaaattgttttact 43
              ||||||||||||||||||||
Sbjct: 143015 caaccaaaaattgttttact 143034
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>gb|AC016622.5|AC016622 Homo sapiens chromosome 5 clone CTD-2343F18, complete sequence
          Length = 110085

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caaccaaaaattgttttact 43
             ||||||||||||||||||||
Sbjct: 74126 caaccaaaaattgttttact 74107
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>gb|AC008833.5|AC008833 Homo sapiens chromosome 5 clone CTD-2146O16, complete sequence
          Length = 141894

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caaccaaaaattgttttact 43
             ||||||||||||||||||||
Sbjct: 98121 caaccaaaaattgttttact 98102
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>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 0.33
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     caaatcaaccaaaaattgtt 38
              ||||||||||||||||||||
Sbjct: 107923 caaatcaaccaaaaattgtt 107942
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>ref|XM_705667.1| Candida albicans SC5314 hypothetical protein (CaO19.9395), mRNA
          Length = 717

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  aaccaaaaattgttttact 43
           |||||||||||||||||||
Sbjct: 590 aaccaaaaattgttttact 608
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>ref|XM_705629.1| Candida albicans SC5314 hypothetical protein (CaO19.1837), mRNA
          Length = 717

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  aaccaaaaattgttttact 43
           |||||||||||||||||||
Sbjct: 590 aaccaaaaattgttttact 608
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>emb|CR933791.16| Zebrafish DNA sequence from clone DKEYP-101F6 in linkage group 13,
             complete sequence
          Length = 176605

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 19    caaatcaaccaaaaattgtttta 41
             ||||||||||||| |||||||||
Sbjct: 80414 caaatcaaccaaagattgtttta 80436
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>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete sequence
          Length = 160122

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     tggttccaaatcaaccaaa 31
              |||||||||||||||||||
Sbjct: 117694 tggttccaaatcaaccaaa 117712
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>gb|AF039712.1| Caenorhabditis elegans cosmid F54D7, complete sequence
          Length = 40457

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    tcaaccaaaaattgtttta 41
             |||||||||||||||||||
Sbjct: 24483 tcaaccaaaaattgtttta 24501
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>emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 in linkage group 23,
              complete sequence
          Length = 128483

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 19     caaatcaaccaaaaattgtttta 41
              ||||| |||||||||||||||||
Sbjct: 109144 caaattaaccaaaaattgtttta 109166
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>dbj|AK134512.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched
            library, clone:6230427N15 product:transmembrane 7
            superfamily member 2, full insert sequence
          Length = 3082

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 13   tggttccaaatcaaccaaa 31
            |||||||||||||||||||
Sbjct: 2439 tggttccaaatcaaccaaa 2457
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 4        aaaatagtgtggttccaaa 22
                |||||||||||||||||||
Sbjct: 20798211 aaaatagtgtggttccaaa 20798229
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>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence
          Length = 150641

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 19     caaatcaaccaaaaattgtttta 41
              ||||| |||||||||||||||||
Sbjct: 111646 caaattaaccaaaaattgtttta 111668
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>emb|AL928641.14| Mouse DNA sequence from clone RP23-272N6 on chromosome 2, complete
             sequence
          Length = 153467

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    tcaaccaaaaattgtttta 41
             |||||||||||||||||||
Sbjct: 76845 tcaaccaaaaattgtttta 76827
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>gb|U95550.1|U95550 Candida albicans TATA-binding protein (TBP) mRNA, complete cds
          Length = 910

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  aaccaaaaattgttttact 43
           |||||||||||||||||||
Sbjct: 624 aaccaaaaattgttttact 642
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>gb|U95549.1|U95549 Candida albicans TATA-binding protein (TBP) gene, complete cds
          Length = 1059

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  aaccaaaaattgttttact 43
           |||||||||||||||||||
Sbjct: 803 aaccaaaaattgttttact 821
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 4        aaaatagtgtggttccaaa 22
                |||||||||||||||||||
Sbjct: 20724425 aaaatagtgtggttccaaa 20724443
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>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 149022

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaaatagtgtggttccaaa 22
             |||||||||||||||||||
Sbjct: 96052 aaaatagtgtggttccaaa 96070
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>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence
          Length = 236246

 Score = 38.2 bits (19), Expect = 1.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    tggttccaaatcaaccaaa 31
             |||||||||||||||||||
Sbjct: 88445 tggttccaaatcaaccaaa 88463
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>gb|AC149401.2| Phakopsora pachyrhizi clone JGIAFNA-61H17, complete sequence
          Length = 36209

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 9    agtgtggttccaaatcaa 26
            ||||||||||||||||||
Sbjct: 8659 agtgtggttccaaatcaa 8676
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>gb|AC149347.2| Phakopsora pachyrhizi clone JGIAFNA-33E15, complete sequence
          Length = 44825

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 9     agtgtggttccaaatcaa 26
             ||||||||||||||||||
Sbjct: 27736 agtgtggttccaaatcaa 27719
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>ref|XM_631875.1| Dictyostelium discoideum hypothetical protein (DDB0187710), partial
            mRNA
          Length = 5595

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 20   aaatcaaccaaaaattgtttta 41
            ||||||||||||||||| ||||
Sbjct: 1029 aaatcaaccaaaaattgattta 1050
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>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0007C23, complete sequence
          Length = 173764

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 16    ttccaaatcaaccaaaaattgt 37
             |||||||| |||||||||||||
Sbjct: 35580 ttccaaatgaaccaaaaattgt 35601
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>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04,
              complete sequence
          Length = 141171

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 16     ttccaaatcaaccaaaaattgt 37
              |||||||| |||||||||||||
Sbjct: 125372 ttccaaatgaaccaaaaattgt 125393
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>gb|AF025458.1| Caenorhabditis elegans cosmid C01B12, complete sequence
          Length = 22973

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 24   caaccaaaaattgtttta 41
            ||||||||||||||||||
Sbjct: 1739 caaccaaaaattgtttta 1756
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>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14,
            complete sequence
          Length = 222032

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 16   ttccaaatcaaccaaaaa 33
            ||||||||||||||||||
Sbjct: 1712 ttccaaatcaaccaaaaa 1695
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>emb|BX088712.23| Zebrafish DNA sequence from clone CH211-199H2 in linkage group 11,
              complete sequence
          Length = 198099

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 16     ttccaaatcaaccaaaaa 33
              ||||||||||||||||||
Sbjct: 105797 ttccaaatcaaccaaaaa 105780
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>gb|AC009449.7| Homo sapiens chromosome 17, clone CTD-2291H15, complete sequence
          Length = 103577

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 23     tcaaccaaaaattgtttt 40
              ||||||||||||||||||
Sbjct: 101055 tcaaccaaaaattgtttt 101072
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>ref|XM_812476.1| Trypanosoma cruzi strain CL Brener endosomal trafficking protein
            RME-8 (Tc00.1047053511511.10) partial mRNA
          Length = 6693

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 10   gtgtggttccaaatcaac 27
            ||||||||||||||||||
Sbjct: 2342 gtgtggttccaaatcaac 2325
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>gb|AC124690.4| Mus musculus BAC clone RP24-157B13 from chromosome 1, complete sequence
          Length = 178992

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 20     aaatcaaccaaaaattgt 37
              ||||||||||||||||||
Sbjct: 127528 aaatcaaccaaaaattgt 127545
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>ref|XM_813999.1| Trypanosoma cruzi strain CL Brener endosomal trafficking protein
            RME-8 (Tc00.1047053506941.9) partial mRNA
          Length = 2581

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 10   gtgtggttccaaatcaac 27
            ||||||||||||||||||
Sbjct: 2342 gtgtggttccaaatcaac 2325
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>ref|XM_760720.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0286) partial mRNA
          Length = 3969

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 14   ggttccaaatcaaccaaa 31
            ||||||||||||||||||
Sbjct: 3614 ggttccaaatcaaccaaa 3597
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>gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence
          Length = 31433

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    tcaaccaaaaattgtttt 40
             ||||||||||||||||||
Sbjct: 27754 tcaaccaaaaattgtttt 27771
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>ref|XM_660401.1| Cryptosporidium hominis TU502 lectin-domain protein (Chro.60593)
           partial mRNA
          Length = 930

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 15  gttccaaatcaaccaaaa 32
           ||||||||||||||||||
Sbjct: 310 gttccaaatcaaccaaaa 327
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>gb|AC146759.29| Medicago truncatula clone mth2-173e19, complete sequence
          Length = 133602

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 9     agtgtggttccaaatcaa 26
             ||||||||||||||||||
Sbjct: 60109 agtgtggttccaaatcaa 60126
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>gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome 14, complete sequence
          Length = 208155

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 13     tggttccaaatcaaccaaaaat 34
              |||||| |||||||||||||||
Sbjct: 109898 tggttctaaatcaaccaaaaat 109919
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>gb|AC144842.2| Homo sapiens chromosome 17, clone XXfos-801612G12, complete sequence
          Length = 40479

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 23   tcaaccaaaaattgtttt 40
            ||||||||||||||||||
Sbjct: 8724 tcaaccaaaaattgtttt 8707
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>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 15     gttccaaatcaaccaaaa 32
              ||||||||||||||||||
Sbjct: 184430 gttccaaatcaaccaaaa 184447
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>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence
          Length = 198470

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 23   tcaaccaaaaattgtttt 40
            ||||||||||||||||||
Sbjct: 1251 tcaaccaaaaattgtttt 1268
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>gb|AC123593.1| Genomic sequence for Medicago truncatula, clone MTABa0052G10, complete
             sequence
          Length = 100769

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     aagaaaatagtgtggttc 18
             ||||||||||||||||||
Sbjct: 19039 aagaaaatagtgtggttc 19022
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>emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in linkage group 14,
             complete sequence
          Length = 148362

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 16    ttccaaatcaaccaaaaa 33
             ||||||||||||||||||
Sbjct: 84964 ttccaaatcaaccaaaaa 84947
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 20      aaatcaaccaaaaattgtttta 41
               |||||||| |||||||||||||
Sbjct: 1335019 aaatcaactaaaaattgtttta 1335040
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>gb|AF047655.1| Caenorhabditis elegans cosmid C17B7, complete sequence
          Length = 34173

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 20   aaatcaaccaaaaattgt 37
            ||||||||||||||||||
Sbjct: 5169 aaatcaaccaaaaattgt 5186
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>emb|BX663520.9| Zebrafish DNA sequence from clone DKEY-105H12 in linkage group 15,
             complete sequence
          Length = 248279

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 12    gtggttccaaatcaaccaaaaa 33
             |||||||||||| |||||||||
Sbjct: 81001 gtggttccaaataaaccaaaaa 81022
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>emb|BX255928.7| Zebrafish DNA sequence from clone DKEY-257P9 in linkage group 25,
              complete sequence
          Length = 132833

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 20     aaatcaaccaaaaattgt 37
              ||||||||||||||||||
Sbjct: 123786 aaatcaaccaaaaattgt 123769
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>gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 168615

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 17   tccaaatcaaccaaaaattgtt 38
            |||||||||||||||| |||||
Sbjct: 5017 tccaaatcaaccaaaatttgtt 5038
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>ref|XM_627836.1| Cryptosporidium parvum Iowa II ERGIC-53-like mannose binding lectin
           that is a type I membrane protein (cgd6_5140), partial
           mRNA
          Length = 1410

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 15  gttccaaatcaaccaaaa 32
           ||||||||||||||||||
Sbjct: 790 gttccaaatcaaccaaaa 807
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>gb|AC120137.16| Mus musculus chromosome 5, clone RP23-280O16, complete sequence
          Length = 181464

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    gtgtggttccaaatcaac 27
             ||||||||||||||||||
Sbjct: 42666 gtgtggttccaaatcaac 42649
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 20      aaatcaaccaaaaattgtttta 41
               |||| |||||||||||||||||
Sbjct: 1834685 aaataaaccaaaaattgtttta 1834664
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 16      ttccaaatcaaccaaaaattgt 37
               |||||||| |||||||||||||
Sbjct: 5987798 ttccaaatgaaccaaaaattgt 5987819
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>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence
          Length = 226696

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 23    tcaaccaaaaattgtttt 40
             ||||||||||||||||||
Sbjct: 79498 tcaaccaaaaattgtttt 79481
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>gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, complete sequence
          Length = 141040

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 19     caaatcaaccaaaaattg 36
              ||||||||||||||||||
Sbjct: 118325 caaatcaaccaaaaattg 118308
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>gb|AC138645.3| Homo sapiens chromosome 17, clone RP11-995C19, complete sequence
          Length = 200420

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 23     tcaaccaaaaattgtttt 40
              ||||||||||||||||||
Sbjct: 168818 tcaaccaaaaattgtttt 168835
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>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence
          Length = 158617

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    tcaaccaaaaattgtttt 40
             ||||||||||||||||||
Sbjct: 62539 tcaaccaaaaattgtttt 62556
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>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence
          Length = 166978

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 23  tcaaccaaaaattgtttt 40
           ||||||||||||||||||
Sbjct: 224 tcaaccaaaaattgtttt 241
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>gb|AC006530.4|AC006530 Homo sapiens chromosome 14 clone BAC 316E14 map 14q24.3, complete
             sequence
          Length = 203010

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    aaccaaaaattgttttac 42
             ||||||||||||||||||
Sbjct: 37963 aaccaaaaattgttttac 37946
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>emb|CR385078.23| Zebrafish DNA sequence from clone DKEYP-104F11 in linkage group 20,
              complete sequence
          Length = 182152

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 16     ttccaaatcaaccaaaaa 33
              ||||||||||||||||||
Sbjct: 142902 ttccaaatcaaccaaaaa 142919
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>emb|Z68105.1|CEF13E6 Caenorhabditis elegans Cosmid F13E6, complete sequence
          Length = 39320

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 22    atcaaccaaaaattgttt 39
             ||||||||||||||||||
Sbjct: 26297 atcaaccaaaaattgttt 26314
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>dbj|D26535.1|HUMDS Homo sapiens gene for dihydrolipoamide succinyltransferase, complete
            cds, exons 1-15
          Length = 22573

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 25   aaccaaaaattgttttac 42
            ||||||||||||||||||
Sbjct: 6384 aaccaaaaattgttttac 6367
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome
               I, complete sequence
          Length = 4277185

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 20      aaatcaaccaaaaattgtttta 41
               |||| |||||||||||||||||
Sbjct: 2448590 aaataaaccaaaaattgtttta 2448611
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>emb|BX004975.9| Zebrafish DNA sequence from clone DKEY-14B16, complete sequence
          Length = 208909

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 24     caaccaaaaattgtttta 41
              ||||||||||||||||||
Sbjct: 147536 caaccaaaaattgtttta 147519
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>emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chromosome 14, complete
             sequence
          Length = 165380

 Score = 36.2 bits (18), Expect = 5.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 13    tggttccaaatcaaccaaaaat 34
             |||||| |||||||||||||||
Sbjct: 99735 tggttctaaatcaaccaaaaat 99756


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 661,600
Number of Sequences: 3902068
Number of extensions: 661600
Number of successful extensions: 174137
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 173505
Number of HSP's gapped (non-prelim): 632
length of query: 43
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 23
effective length of database: 17,155,003,908
effective search space: 394565089884
effective search space used: 394565089884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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