ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in l... 44 0.29
2emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, c... 44 0.29
3gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence 42 1.1
4emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 42 1.1
5gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, compl... 42 1.1
6dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 42 1.1
7dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 42 1.1
8gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 42 1.1
9gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 42 1.1
10gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 42 1.1
11gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosom... 42 1.1
12dbj|AK032198.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.1
13dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
14dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 42 1.1
15dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 42 1.1
16dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
17dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
18emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 42 1.1
19emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 42 1.1
20gb|BC053066.1| Mus musculus adaptor-related protein complex 3, d... 40 4.5
21ref|XM_421947.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 40 4.5
22ref|NM_007460.1| Mus musculus adaptor-related protein complex 3,... 40 4.5
23gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
24gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosom... 40 4.5
25gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosom... 40 4.5
26ref|XM_786490.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 4.5
27gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, compl... 40 4.5
28emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in... 40 4.5
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
33gb|AF469671.1|AF469670S2 Mus musculus transposon intracisternal ... 40 4.5
34gb|AC090967.4| Staphylococcus aureus strain NCTC 8325 clone saba... 40 4.5
35gb|AF463835.1| Oryza sativa (japonica cultivar-group) transgenic... 40 4.5
36dbj|AK187726.1| Mus musculus cDNA, clone:Y0G0142N12, strand:plus... 40 4.5
37dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
38dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
39dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
40dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
41dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
42gb|AF118839.1|AF118839 Staphylococcus aureus iron uptake regulat... 40 4.5
43emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 i... 40 4.5
44dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
45dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
46dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
47gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequ... 40 4.5
48gb|BC048786.1| Mus musculus adaptor-related protein complex 3, d... 40 4.5
49gb|AF095597.1|AF095597 Staphylococcus aureus strain ISP3 ferric ... 40 4.5
50dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 4.5
51dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 4.5
52dbj|AB004305.1| Mus musculus mRNA for mBLVR, complete cds 40 4.5 
>emb|CR450778.7| Zebrafish DNA sequence from clone DKEY-14I6 in linkage group 8,
             complete sequence
          Length = 120755

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 10    ctctctgcattgcactgtagcagaca 35
             ||||||||||||||||| ||||||||
Sbjct: 42586 ctctctgcattgcactgcagcagaca 42611
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>emb|BX004774.4| Zebrafish DNA sequence from clone CH211-133L5, complete sequence
          Length = 186380

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 10    ctctctgcattgcactgtagcagaca 35
             ||||||||||||||||| ||||||||
Sbjct: 96579 ctctctgcattgcactgcagcagaca 96604
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>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence
          Length = 257036

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ttttctcaataaaatgtgggt 134
             |||||||||||||||||||||
Sbjct: 66808 ttttctcaataaaatgtgggt 66828
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20300 aaaaattactttcatgcatct 20280



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1564637 acagttttctcaataaaatg 1564656
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>gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, complete sequence
          Length = 107685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     gaaccaacctctctgcattgc 22
             |||||||||||||||||||||
Sbjct: 51421 gaaccaacctctctgcattgc 51401
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20307 aaaaattactttcatgcatct 20287



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1613966 acagttttctcaataaaatg 1613985
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 18409 aaaaattactttcatgcatct 18389
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20323 aaaaattactttcatgcatct 20303



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1579068 acagttttctcaataaaatg 1579087
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20296 aaaaattactttcatgcatct 20276



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1518449 acagttttctcaataaaatg 1518468
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20323 aaaaattactttcatgcatct 20303



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1601889 acagttttctcaataaaatg 1601908
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>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete
             sequence
          Length = 156014

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ttttctcaataaaatgtgggt 134
             |||||||||||||||||||||
Sbjct: 96949 ttttctcaataaaatgtgggt 96969
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>dbj|AK032198.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430411K07
            product:unclassifiable, full insert sequence
          Length = 3000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 114  ttttctcaataaaatgtgggt 134
            |||||||||||||||||||||
Sbjct: 1220 ttttctcaataaaatgtgggt 1200
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 177      aatgtgttgccacttaccact 197
                |||||||||||||||||||||
Sbjct: 11393642 aatgtgttgccacttaccact 11393622



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      tttacagttttctcaataaaatgt 130
                ||||| ||||||||||||||||||
Sbjct: 14656480 tttaccgttttctcaataaaatgt 14656457



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 107     tttacagttttctcaataaaatgt 130
               ||||| ||||||||||||||||||
Sbjct: 5900199 tttacggttttctcaataaaatgt 5900176
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome,
             strain:MW2
          Length = 2820462

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20300 aaaaattactttcatgcatct 20280



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1584879 acagttttctcaataaaatg 1584898
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20306 aaaaattactttcatgcatct 20286



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1537554 acagttttctcaataaaatg 1537573
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0446G09
          Length = 146898

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 177  aatgtgttgccacttaccact 197
            |||||||||||||||||||||
Sbjct: 3162 aatgtgttgccacttaccact 3142
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>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   aatgtgttgccacttaccact 197
             |||||||||||||||||||||
Sbjct: 94153 aatgtgttgccacttaccact 94133
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20288 aaaaattactttcatgcatct 20268



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1647382 acagttttctcaataaaatg 1647401
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaaaattactttcatgcatct 261
             |||||||||||||||||||||
Sbjct: 20282 aaaaattactttcatgcatct 20262



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     acagttttctcaataaaatg 129
               ||||||||||||||||||||
Sbjct: 1488162 acagttttctcaataaaatg 1488181
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>gb|BC053066.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit, mRNA
            (cDNA clone MGC:62391 IMAGE:5704929), complete cds
          Length = 4806

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gtgcttgcagcaagttcttc 306
            ||||||||||||||||||||
Sbjct: 2905 gtgcttgcagcaagttcttc 2886
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>ref|XM_421947.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 9430067K14 gene
            (LOC424092), mRNA
          Length = 5025

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 223  acaactcaaacatgttgcaa 242
            ||||||||||||||||||||
Sbjct: 5008 acaactcaaacatgttgcaa 4989
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>ref|NM_007460.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit
            (Ap3d1), mRNA
          Length = 4730

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gtgcttgcagcaagttcttc 306
            ||||||||||||||||||||
Sbjct: 2889 gtgcttgcagcaagttcttc 2870
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>gb|AC130609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0048F12,
             complete sequence
          Length = 139627

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             ||||| ||||||||||||||||||
Sbjct: 96057 tttacggttttctcaataaaatgt 96080
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>gb|AC166937.2| Mus musculus BAC clone RP24-121A12 from chromosome 10, complete sequence
          Length = 183115

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gtgcttgcagcaagttcttc 306
              ||||||||||||||||||||
Sbjct: 172520 gtgcttgcagcaagttcttc 172501
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>gb|AC152410.6| Mus musculus BAC clone RP24-290C21 from chromosome 10, complete sequence
          Length = 175812

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gtgcttgcagcaagttcttc 306
              ||||||||||||||||||||
Sbjct: 138380 gtgcttgcagcaagttcttc 138399
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>ref|XM_786490.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC586719 (LOC586719), mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   agacataagactaagttcct 50
            ||||||||||||||||||||
Sbjct: 1182 agacataagactaagttcct 1201
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>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
          Length = 177958

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    tctgtcctttacagttttct 119
              ||||||||||||||||||||
Sbjct: 160057 tctgtcctttacagttttct 160038
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>emb|CR376856.9| Zebrafish DNA sequence from clone CH211-11O22 in linkage group 9,
              complete sequence
          Length = 179053

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tcaaacatgttgcaaaaatt 247
              ||||||||||||||||||||
Sbjct: 133022 tcaaacatgttgcaaaaatt 133041
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     tttacagttttctcaataaaatgt 130
               ||||| ||||||||||||||||||
Sbjct: 9157990 tttaccgttttctcaataaaatgt 9158013
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      tttacagttttctcaataaaatgt 130
                ||||| ||||||||||||||||||
Sbjct: 25464003 tttacggttttctcaataaaatgt 25463980



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 107      tttacagttttctcaataaaatgt 130
                ||||| ||||||||||||||||||
Sbjct: 25458632 tttacggttttctcaataaaatgt 25458609
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      tttacagttttctcaataaaatgt 130
                ||||| ||||||||||||||||||
Sbjct: 11651622 tttacggttttctcaataaaatgt 11651645
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 107      tttacagttttctcaataaaatgt 130
                ||||| ||||||||||||||||||
Sbjct: 22749742 tttactgttttctcaataaaatgt 22749765



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     tttacagttttctcaataaaatgt 130
               |||| |||||||||||||||||||
Sbjct: 8540038 tttagagttttctcaataaaatgt 8540061
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>gb|AF469671.1|AF469670S2 Mus musculus transposon intracisternal A particle 3' long terminal
           repeat and truncated adaptor-related protein complex
           AP-3 delta subunit (Ap3d) mRNA, Ap3d-mh2J allele,
           partial sequence
          Length = 364

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 gtgcttgcagcaagttcttc 306
           ||||||||||||||||||||
Sbjct: 336 gtgcttgcagcaagttcttc 317
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>gb|AC090967.4| Staphylococcus aureus strain NCTC 8325 clone sabac-125, complete
             sequence
          Length = 27650

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   acagttttctcaataaaatg 129
             ||||||||||||||||||||
Sbjct: 20687 acagttttctcaataaaatg 20706
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>gb|AF463835.1| Oryza sativa (japonica cultivar-group) transgenic plant p0822L
           integrated T-DNA(Ds), flanking sequence
          Length = 766

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 107 tttacagttttctcaataaaatgt 130
           |||| |||||||||||||||||||
Sbjct: 73  tttagagttttctcaataaaatgt 50
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>dbj|AK187726.1| Mus musculus cDNA, clone:Y0G0142N12, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000020420, based on BLAT search
          Length = 261

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 gtgcttgcagcaagttcttc 306
           ||||||||||||||||||||
Sbjct: 205 gtgcttgcagcaagttcttc 186
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0009N02
          Length = 121142

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 107  tttacagttttctcaataaaatgt 130
            |||| |||||||||||||||||||
Sbjct: 9361 tttagagttttctcaataaaatgt 9384
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>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0019I19
          Length = 164483

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    tttacagttttctcaataaaatgt 130
              ||||| ||||||||||||||||||
Sbjct: 138012 tttacggttttctcaataaaatgt 137989



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    tttacagttttctcaataaaatgt 130
              ||||| ||||||||||||||||||
Sbjct: 132641 tttacggttttctcaataaaatgt 132618
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>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_A05
          Length = 120823

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             ||||| ||||||||||||||||||
Sbjct: 42647 tttacggttttctcaataaaatgt 42624
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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             ||||| ||||||||||||||||||
Sbjct: 49478 tttaccgttttctcaataaaatgt 49455
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>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1559_F09
          Length = 87792

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             ||||| ||||||||||||||||||
Sbjct: 74873 tttacggttttctcaataaaatgt 74850
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>gb|AF118839.1|AF118839 Staphylococcus aureus iron uptake regulatory protein (fur) gene,
           complete cds; and site-specific recombinase (XerD) gene,
           partial cds
          Length = 1651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 acagttttctcaataaaatg 129
           ||||||||||||||||||||
Sbjct: 206 acagttttctcaataaaatg 187
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>emb|BX005146.4| Zebrafish DNA sequence from clone CH211-152N19 in linkage group 3,
              complete sequence
          Length = 180858

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tcaaacatgttgcaaaaatt 247
              ||||||||||||||||||||
Sbjct: 144871 tcaaacatgttgcaaaaatt 144890
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>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             |||| |||||||||||||||||||
Sbjct: 89308 tttagagttttctcaataaaatgt 89331
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>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0046O12
          Length = 128223

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 107    tttacagttttctcaataaaatgt 130
              ||||| ||||||||||||||||||
Sbjct: 108538 tttactgttttctcaataaaatgt 108561
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>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0012K14
          Length = 155544

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   tttacagttttctcaataaaatgt 130
             ||||| ||||||||||||||||||
Sbjct: 93484 tttaccgttttctcaataaaatgt 93507
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>gb|AC174827.3| Cavia porcellus clone CH234-477P24, complete sequence
          Length = 156330

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ttgcaaaaattactttcatg 256
             ||||||||||||||||||||
Sbjct: 94492 ttgcaaaaattactttcatg 94473
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>gb|BC048786.1| Mus musculus adaptor-related protein complex 3, delta 1 subunit, mRNA
            (cDNA clone MGC:54776 IMAGE:6489789), complete cds
          Length = 4756

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gtgcttgcagcaagttcttc 306
            ||||||||||||||||||||
Sbjct: 2879 gtgcttgcagcaagttcttc 2860
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>gb|AF095597.1|AF095597 Staphylococcus aureus strain ISP3 ferric uptake regulator homolog
           (furC) gene, complete cds
          Length = 600

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 acagttttctcaataaaatg 129
           ||||||||||||||||||||
Sbjct: 33  acagttttctcaataaaatg 14
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>dbj|AP006392.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39E03, TM0266,
             complete sequence
          Length = 113459

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aacatgttgcaaaaattact 250
             ||||||||||||||||||||
Sbjct: 89723 aacatgttgcaaaaattact 89742
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>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
             complete sequence
          Length = 108582

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aacatgttgcaaaaattact 250
             ||||||||||||||||||||
Sbjct: 40714 aacatgttgcaaaaattact 40733
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>dbj|AB004305.1| Mus musculus mRNA for mBLVR, complete cds
          Length = 4730

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gtgcttgcagcaagttcttc 306
            ||||||||||||||||||||
Sbjct: 2889 gtgcttgcagcaagttcttc 2870


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,985,533
Number of Sequences: 3902068
Number of extensions: 2985533
Number of successful extensions: 52802
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52493
Number of HSP's gapped (non-prelim): 309
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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