Clone Name | rbastl43e12 |
---|---|
Clone Library Name | barley_pub |
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 60.0 bits (30), Expect = 5e-07 Identities = 36/38 (94%) Strand = Plus / Minus Query: 13 ttcattatggggcaaaacaggggattttttctgcacac 50 |||||||| |||||||||| |||||||||||||||||| Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacac 2859
>gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosome 12, complete sequence Length = 165700 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 25 caaaacaggggatttttt 42 |||||||||||||||||| Sbjct: 10914 caaaacaggggatttttt 10897
>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3, complete sequence Length = 168285 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 caaaacaggggatttttt 42 |||||||||||||||||| Sbjct: 101785 caaaacaggggatttttt 101802
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 tcattatggggcaaaaca 31 |||||||||||||||||| Sbjct: 143392 tcattatggggcaaaaca 143375
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 18 tatggggcaaaacagggg 35 |||||||||||||||||| Sbjct: 308997 tatggggcaaaacagggg 308980
>gb|AC096741.3| Homo sapiens BAC clone RP11-327O17 from 4, complete sequence Length = 177300 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 10 gacttcattatggggcaaaaca 31 ||||| |||||||||||||||| Sbjct: 129856 gacttaattatggggcaaaaca 129877
>gb|AC007638.8| Homo sapiens chromosome 17, clone RP11-515O17, complete sequence Length = 182051 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 18 tatggggcaaaacaggggattt 39 ||||||||||| |||||||||| Sbjct: 175829 tatggggcaaagcaggggattt 175850
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 25 caaaacaggggattttttctgc 46 |||||| ||||||||||||||| Sbjct: 2390675 caaaaccggggattttttctgc 2390696
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 aacaggggattttttctg 45 |||||||||||||||||| Sbjct: 78257 aacaggggattttttctg 78274
>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence Length = 193434 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 25 caaaacaggggatttttt 42 |||||||||||||||||| Sbjct: 63402 caaaacaggggatttttt 63419
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 aaaacaggggattttttc 43 |||||||||||||||||| Sbjct: 17001460 aaaacaggggattttttc 17001443
>gb|AC084538.1|CBRG26J16 Caenorhabditis briggsae cosmid G26J16, complete sequence Length = 23342 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 caggggattttttctgca 47 |||||||||||||||||| Sbjct: 3795 caggggattttttctgca 3778
>gb|AC005177.1|AC005177 Homo sapiens chromosome 17, clone HCIT462L7, complete sequence Length = 142278 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Minus Query: 18 tatggggcaaaacaggggattt 39 ||||||||||| |||||||||| Sbjct: 127662 tatggggcaaagcaggggattt 127641
>emb|AL606751.5| Zebrafish DNA sequence from clone BUSM1-173A8 in linkage group 1, complete sequence Length = 104334 Score = 36.2 bits (18), Expect = 6.6 Identities = 21/22 (95%) Strand = Plus / Plus Query: 15 cattatggggcaaaacagggga 36 |||||||||||||| ||||||| Sbjct: 51699 cattatggggcaaagcagggga 51720
>gb|AC115959.17| Mus musculus chromosome 1, clone RP24-65D16, complete sequence Length = 187431 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 23 ggcaaaacaggggatttt 40 |||||||||||||||||| Sbjct: 23241 ggcaaaacaggggatttt 23224
>gb|AC117796.12| Mus musculus chromosome 1, clone RP24-554P6, complete sequence Length = 109851 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 23 ggcaaaacaggggatttt 40 |||||||||||||||||| Sbjct: 37642 ggcaaaacaggggatttt 37659
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 aaaacaggggattttttc 43 |||||||||||||||||| Sbjct: 16954693 aaaacaggggattttttc 16954676
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 aaaacaggggattttttc 43 |||||||||||||||||| Sbjct: 123503 aaaacaggggattttttc 123486 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 362,994 Number of Sequences: 3902068 Number of extensions: 362994 Number of successful extensions: 87747 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87637 Number of HSP's gapped (non-prelim): 110 length of query: 50 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 30 effective length of database: 17,155,003,908 effective search space: 514650117240 effective search space used: 514650117240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)