Clone Name | rbastl43e11 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | THIX_CORGL (P42461) Thiamine biosynthesis protein X precursor | 28 | 4.9 |
---|
>THIX_CORGL (P42461) Thiamine biosynthesis protein X precursor| Length = 190 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = -1 Query: 173 GIDCTMPLCLVPVFGIH*EG 114 G+DCT C+ VFG H EG Sbjct: 157 GLDCTTQACVAKVFGDHTEG 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,374,523 Number of Sequences: 219361 Number of extensions: 549816 Number of successful extensions: 1353 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1332 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1353 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)