ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR... 31 1.8
2HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (E... 28 8.9
3OVOS_CHICK (P20740) Ovostatin precursor (Ovomacroglobulin) 28 8.9
4SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 28 8.9
5SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 28 8.9
6PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit... 28 8.9

>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220|
           antigen) [Contains: Insulin receptor alpha subunit;
           Insulin receptor beta subunit]
          Length = 1382

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
 Frame = +1

Query: 61  FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 216
           F++ QD  H  + S +  C Q V+ N  CIP+    S +T  N++     P L      C
Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339

Query: 217 HFFTGQQPCDHI 252
           H   G++  D +
Sbjct: 340 HLLEGEKTIDSV 351



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>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +1

Query: 40   PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 180
            P  S+A    +QDHS ++S   + P+  ++  S  P  NI    SS T Q
Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826



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>OVOS_CHICK (P20740) Ovostatin precursor (Ovomacroglobulin)|
          Length = 1473

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -2

Query: 321  RKAKHEAEGLDEPLQLTEVFGASYVVARLLSSEEMTQEWKKEASGCILWCMRTLN 157
            R A  ++  LD  +Q T+V   SYV+  LL     +QE   +AS  + W +R  N
Sbjct: 1189 RSAPEKSHLLDH-VQSTDVEITSYVLLALLYKPNRSQEDLTKASAIVQWIIRQQN 1242



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>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 234 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 124
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 234 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 124
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
 Frame = +1

Query: 70  IQDHSKRT--SIQMNCPQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPF 210
           I++H K+   ++    P+ VL  +  +P  + + +H           T  NATR FLLPF
Sbjct: 75  IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134

Query: 211 L 213
           L
Sbjct: 135 L 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,868,395
Number of Sequences: 219361
Number of extensions: 1242399
Number of successful extensions: 3492
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3491
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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