Clone Name | rbastl43e06 |
---|---|
Clone Library Name | barley_pub |
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 8/72 (11%) Frame = +1 Query: 61 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLLPFL------C 216 F++ QD H + S + C Q V+ N CIP+ S +T N++ P L C Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPE--CPSGYT-MNSSNLLCTPCLGPCPKVC 339 Query: 217 HFFTGQQPCDHI 252 H G++ D + Sbjct: 340 HLLEGEKTIDSV 351
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 40 PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 180 P S+A +QDHS ++S + P+ ++ S P NI SS T Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>OVOS_CHICK (P20740) Ovostatin precursor (Ovomacroglobulin)| Length = 1473 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = -2 Query: 321 RKAKHEAEGLDEPLQLTEVFGASYVVARLLSSEEMTQEWKKEASGCILWCMRTLN 157 R A ++ LD +Q T+V SYV+ LL +QE +AS + W +R N Sbjct: 1189 RSAPEKSHLLDH-VQSTDVEITSYVLLALLYKPNRSQEDLTKASAIVQWIIRQQN 1242
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 234 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 124 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 234 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 124 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 13/61 (21%) Frame = +1 Query: 70 IQDHSKRT--SIQMNCPQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPF 210 I++H K+ ++ P+ VL + +P + + +H T NATR FLLPF Sbjct: 75 IKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPF 134 Query: 211 L 213 L Sbjct: 135 L 135 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,868,395 Number of Sequences: 219361 Number of extensions: 1242399 Number of successful extensions: 3492 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3363 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3491 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)