>gb|BT018356.1| Zea mays clone EL01T0403H12.c mRNA sequence
          Length = 759

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                       
Query: 290 cctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctcccag 349
           ||||||||||||||||||| ||||| ||||| || || ||||| || || | ||||||||
Sbjct: 414 cctcgttgtagtaaagctccacaaatgtgcccccgccaatacccttcgccaacctcccag 355

                               
Query: 350 ggttcacacagatgaaccgt 369
           ||||||||||||| ||||||
Sbjct: 354 ggttcacacagataaaccgt 335

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 286     gtgtcctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctc 345
               ||||||||||||||||  || |||||||| ||||||||||| || || |||||||  |||
Sbjct: 7920994 gtgtcctcgttgtagttgagttctacaaatgtgcctccaccaatgccctttgctaatctc 7921053

                         
Query: 346     ccagggttca 355
               ||||||||||
Sbjct: 7921054 ccagggttca 7921063

>dbj|AK064505.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-D09, full
            insert sequence
          Length = 1511

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 286  gtgtcctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctc 345
            ||||||||||||||||  || |||||||| ||||||||||| || || |||||||  |||
Sbjct: 1170 gtgtcctcgttgtagttgagttctacaaatgtgcctccaccaatgccctttgctaatctc 1111

                      
Query: 346  ccagggttca 355
            ||||||||||
Sbjct: 1110 ccagggttca 1101



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 396  ggaaagcaccttcacagatggagcaagatcagaa 429
            |||||||||||||||| |||||||||| ||||||
Sbjct: 1060 ggaaagcaccttcacaaatggagcaaggtcagaa 1027

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 286     gtgtcctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctc 345
               ||||||||||||||||  || |||||||| ||||||||||| || || |||||||  |||
Sbjct: 7920875 gtgtcctcgttgtagttgagttctacaaatgtgcctccaccaatgccctttgctaatctc 7920934

                         
Query: 346     ccagggttca 355
               ||||||||||
Sbjct: 7920935 ccagggttca 7920944

>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153111

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 286   gtgtcctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctc 345
             ||||||||||||||||  || |||||||| ||||||||||| || || |||||||  |||
Sbjct: 79176 gtgtcctcgttgtagttgagttctacaaatgtgcctccaccaatgccctttgctaatctc 79117

                       
Query: 346   ccagggttca 355
             ||||||||||
Sbjct: 79116 ccagggttca 79107

>gb|AY111224.1| Zea mays CL3646_1 mRNA sequence
          Length = 644

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 290 cctcgttgtagtaaagctctacaaacgtgcctccaccgataccttttgctagcctcccag 349
           ||||||||||||||||||| ||||| |||      || ||||| || || | ||||||||
Sbjct: 313 cctcgttgtagtaaagctccacaaatgtgnnnnngccaatacccttcgccaacctcccag 372

                               
Query: 350 ggttcacacagatgaaccgt 369
           ||||||||||||| ||||||
Sbjct: 373 ggttcacacagataaaccgt 392

>gb|AC165156.3| Mus musculus BAC clone RP23-298I7 from chromosome 9, complete sequence
          Length = 198962

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     gctgaatttaaaatgtacgta 58
              |||||||||||||||||||||
Sbjct: 184865 gctgaatttaaaatgtacgta 184845

>emb|AL589740.4| Human DNA sequence from clone RP11-436D23 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 187863

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   tacttcatactagtctcatct 205
             |||||||||||||||||||||
Sbjct: 51785 tacttcatactagtctcatct 51765

>emb|AL021394.10|HS237J2 Human DNA sequence from clone RP1-237J2 on chromosome 20q12-13.13
            Contains part of the NCOA3 gene for nuclear receptor
            coactivator 3 and a CpG island, complete sequence
          Length = 68589

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 401  gcaccttcacagatggagcaa 421
            |||||||||||||||||||||
Sbjct: 5842 gcaccttcacagatggagcaa 5862

>gb|AC156837.2| Mus musculus BAC clone RP23-18K24 from chromosome 9, complete sequence
          Length = 205623

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     gctgaatttaaaatgtacgta 58
              |||||||||||||||||||||
Sbjct: 105266 gctgaatttaaaatgtacgta 105246

>gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromosome unknown, complete
             sequence
          Length = 209917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    tgctgttgagcttgtgctgaattta 47
             ||||||||||||||| |||||||||
Sbjct: 85029 tgctgttgagcttgtcctgaattta 85005

>emb|AL672288.5| Mouse DNA sequence from clone RP23-186F4 on chromosome X, complete
              sequence
          Length = 185588

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 230    ggaaaatgttacaaattcttt 250
              |||||||||||||||||||||
Sbjct: 129136 ggaaaatgttacaaattcttt 129116

>gb|AF238380.3| Homo sapiens chromosome X multiple clones map p11.23, complete sequence
          Length = 158698

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 219    cttggtgaataggaaaatgttaca 242
              |||||||||||| |||||||||||
Sbjct: 130200 cttggtgaatagaaaaatgttaca 130223

>gb|AC130481.11| Mus musculus chromosome 1, clone RP24-125E22, complete sequence
          Length = 159436

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     atgctgttgagcttgtgctg 41
              ||||||||||||||||||||
Sbjct: 105013 atgctgttgagcttgtgctg 105032

>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence
          Length = 177953

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggaaaatgttacaaattctt 249
             ||||||||||||||||||||
Sbjct: 57921 ggaaaatgttacaaattctt 57902

>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   taactagaattacagactta 132
             ||||||||||||||||||||
Sbjct: 73237 taactagaattacagactta 73256

>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence
          Length = 161147

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ggaaaatgttacaaattctt 249
              ||||||||||||||||||||
Sbjct: 159827 ggaaaatgttacaaattctt 159808

>emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on chromosome 6, complete
             sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    acatgttacaaataagtttt 77
             ||||||||||||||||||||
Sbjct: 17904 acatgttacaaataagtttt 17923

>emb|AL136159.11| Human DNA sequence from clone RP11-165M6 on chromosome 13 Contains a
            novel gene and a ribosomal protein L35 (RPL35)
            pseudogene, complete sequence
          Length = 74012

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 235  atgttacaaattctttcttagatg 258
            |||||||||||||||| |||||||
Sbjct: 8342 atgttacaaattctttattagatg 8319

>emb|AL050337.6|HSJ503F13 Human DNA sequence from clone RP3-503F13 on chromosome 6q24.1-25.2
             Contains the IFNGR1 gene for interferon gamma receptor 1,
             the gene for class II cytokine receptor (IL22RA2)
             (interleukin 22-binding protein, IL22BP) and a putative
             CpG island, complete sequence
          Length = 113811

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   actagtctcatctttccagt 212
             ||||||||||||||||||||
Sbjct: 87641 actagtctcatctttccagt 87622

>gb|AC129146.3| Rattus norvegicus 2 BAC CH230-266D19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 180291

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   aaaatgttacaaattctttc 251
             ||||||||||||||||||||
Sbjct: 17421 aaaatgttacaaattctttc 17402

>gb|AC127971.3| Rattus norvegicus 2 BAC CH230-320E2 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 141084

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   aaaatgttacaaattctttc 251
             ||||||||||||||||||||
Sbjct: 71127 aaaatgttacaaattctttc 71146

>gb|AC158216.7| Mus musculus chromosome 7, clone RP24-167K8, complete sequence
          Length = 189027

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   taggaaaatgttacaaattc 247
             ||||||||||||||||||||
Sbjct: 19366 taggaaaatgttacaaattc 19347

>gb|AC104409.3| Homo sapiens BAC clone RP11-362A12 from 2, complete sequence
          Length = 88747

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 101   agctgaattaactaactagaattacaga 128
             |||||||||||  |||||||||||||||
Sbjct: 41895 agctgaattaagaaactagaattacaga 41922

>gb|AF222686.1|AF222686 Homo sapiens chromosome X PAC K6166 map Xp11.23, complete sequence
          Length = 122181

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 219  cttggtgaataggaaaatgttaca 242
            |||||||||||| |||||||||||
Sbjct: 9961 cttggtgaatagaaaaatgttaca 9984

>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete
              sequence
          Length = 297848

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ggaaaatgttacaaattctt 249
              ||||||||||||||||||||
Sbjct: 148783 ggaaaatgttacaaattctt 148764

>gb|AC099719.9| Mus musculus chromosome 7, clone RP23-394F19, complete sequence
          Length = 215718

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    taggaaaatgttacaaattc 247
              ||||||||||||||||||||
Sbjct: 192881 taggaaaatgttacaaattc 192862

>gb|AC104747.23| Mus musculus chromosome 1, clone RP23-248N10, complete sequence
          Length = 228588

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  atgctgttgagcttgtgctg 41
           ||||||||||||||||||||
Sbjct: 246 atgctgttgagcttgtgctg 265

>emb|AL732546.13| Mouse DNA sequence from clone RP23-264D16 on chromosome 2, complete
              sequence
          Length = 233321

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    tcccagggttcacacagatg 363
              ||||||||||||||||||||
Sbjct: 174731 tcccagggttcacacagatg 174712

>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   aaaatgttacaaattctttcttag 255
             ||||||||||||| ||||||||||
Sbjct: 84393 aaaatgttacaaagtctttcttag 84370


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,809,590
Number of Sequences: 3902068
Number of extensions: 3809590
Number of successful extensions: 69746
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69654
Number of HSP's gapped (non-prelim): 92
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)