Clone Name | rbastl43e02 |
---|---|
Clone Library Name | barley_pub |
>CISY3_YEAST (P43635) Citrate synthase 3 (EC 2.3.3.1)| Length = 486 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%) Frame = +2 Query: 176 GRVYTNL----HTLTSHSNPKKWCLGNCMLLG 259 GR+Y+N+ H L +S WC C LLG Sbjct: 213 GRIYSNITNEGHPLGQYSEEVDWCTNICSLLG 244
>COFH_SYNP6 (Q5N3T7) FO synthase subunit 2 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) Length = 386 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 6/39 (15%) Frame = +3 Query: 138 PEPLDA-----IVQTVHQAGYTPTS-IRSPHIPTPKNGA 236 PE LD+ I+QT HQ G TS + S H+ TP A Sbjct: 199 PEKLDSATWKTIIQTAHQVGLPTTSTLLSGHLETPSQQA 237
>AFAM_MOUSE (O89020) Afamin precursor (Alpha-albumin) (Alpha-Alb)| Length = 611 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 Query: 15 AMINNETNQLQQEGKKESARHFL 83 AM+ E NQ Q+ GK RHFL Sbjct: 410 AMVQQECNQFQELGKDTLQRHFL 432
>ENO_PYRHO (O59605) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 27.7 bits (60), Expect = 7.4 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = +3 Query: 141 EPLDAIVQTVHQAGYTP 191 EPLDA+++ + +AGY P Sbjct: 220 EPLDALIKAIEEAGYKP 236
>KLF3_MOUSE (Q60980) Krueppel-like factor 3 (Basic krueppel-like factor)| (CACCC-box-binding protein BKLF) (TEF-2) Length = 344 Score = 27.7 bits (60), Expect = 7.4 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -2 Query: 291 RRGNLPAANESPSSIQLPRH 232 +RG+ PAA SPSS++ P H Sbjct: 68 KRGSPPAAGGSPSSLKFPSH 87
>ENO_METKA (Q8TUV6) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 427 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +3 Query: 141 EPLDAIVQTVHQAGYTP 191 EPLD +V+ + +AGY P Sbjct: 218 EPLDVLVEAIEEAGYAP 234
>ENO_METAC (Q8TQ79) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 429 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +3 Query: 141 EPLDAIVQTVHQAGYTPTSI 200 E LDA+VQ + +AGYT + + Sbjct: 230 EALDALVQAIEEAGYTESEV 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,695,630 Number of Sequences: 219361 Number of extensions: 851728 Number of successful extensions: 2103 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2074 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2103 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)