ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 1e-06
3gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic ... 62 1e-06
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
5gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, com... 42 1.1
6gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D... 42 1.1
7gb|AC154049.1| Drosophila melanogaster clone BACR23M02, complete... 40 4.5
8ref|NM_178629.2| Mus musculus RIKEN cDNA 4930579E17 gene (493057... 40 4.5
9gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete se... 40 4.5
10gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosom... 40 4.5
11gb|BC101900.1| Rattus norvegicus cDNA clone IMAGE:7932282 40 4.5
12gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosom... 40 4.5
13emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 ... 40 4.5
14gb|AC115760.9| Mus musculus chromosome 14, clone RP23-62M14, com... 40 4.5
15gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome... 40 4.5
16gb|AC007392.4| Homo sapiens BAC clone RP11-444B4 from 2, complet... 40 4.5
17gb|AC092107.5| Homo sapiens BAC clone RP11-755J8 from UL, comple... 40 4.5
18gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children'... 40 4.5
19emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 40 4.5
20emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on ch... 40 4.5
21emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on ch... 40 4.5
22emb|AL139123.15| Human DNA sequence from clone RP11-500G10 on ch... 40 4.5
23gb|AC105339.9| Homo sapiens chromosome 15, clone RP11-752G15, co... 40 4.5
24emb|AL133294.10| Human DNA sequence from clone RP5-1135K18 on ch... 40 4.5
25emb|AL022396.1|HS380E11 Human DNA sequence from clone RP3-380E11... 40 4.5
26emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chro... 40 4.5
27gb|AC092823.4| Homo sapiens 12 BAC RP11-235A16 (Roswell Park Can... 40 4.5
28gb|AC125394.27| Pan troglodytes clone rp43-45i3, complete sequence 40 4.5
29gb|AC044907.16| Homo sapiens chromosome 15, clone RP11-127F21, c... 40 4.5
30gb|AF371315.1|AF371315 Debaryomyces hansenii protein kinase Pbs2... 40 4.5
31gb|BC024061.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cD... 40 4.5
32dbj|AK051322.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 4.5
33dbj|AK045940.1| Mus musculus adult male corpora quadrigemina cDN... 40 4.5
34dbj|AK016317.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.5
35dbj|AK039004.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 40 4.5
36gb|BC050993.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cD... 40 4.5
37gb|BC086665.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cD... 40 4.5
38gb|AC097173.1| Homo sapiens BAC clone RP11-96A1 from 4, complete... 40 4.5
39gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, c... 40 4.5
40gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete... 40 4.5
41gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G... 40 4.5
42dbj|AK181790.1| Mus musculus cDNA, clone:Y0G0119H03, strand:unsp... 40 4.5
43emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 40 4.5
44gb|AC152943.1| Mus musculus 10 BAC RP23-225G5 (Roswell Park Canc... 40 4.5
45gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 ... 40 4.5
46emb|AL109720.1|IRO209544 Homo sapiens mRNA full length insert cD... 40 4.5
47emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-7... 40 4.5
48gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 ... 40 4.5
49emb|AL732365.17| Mouse DNA sequence from clone RP23-357O2 on chr... 40 4.5
50gb|AC147186.3| Mus musculus BAC clone RP24-112I5 from 3, complet... 40 4.5
51emb|AL713995.11| Mouse DNA sequence from clone RP23-423L9 on chr... 40 4.5 
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06
            map near C10769, complete sequence
          Length = 194856

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                           
Query: 1    gaacgagcatttttgctatgatcaacaatgaaacaaatcaattacag 47
            |||||| ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 6539 gaacgaacatttctgctatgatcaacaatgaaac-aatcaattacag 6494
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                               
Query: 1        gaacgagcatttttgctatgatcaacaatgaaacaaatcaattacag 47
                |||||| ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 29132752 gaacgaacatttctgctatgatcaacaatgaaac-aatcaattacag 29132797
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>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete
             sequence
          Length = 91084

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Minus

                                                            
Query: 1     gaacgagcatttttgctatgatcaacaatgaaacaaatcaattacag 47
             |||||| ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 38624 gaacgaacatttctgctatgatcaacaatgaaac-aatcaattacag 38579
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 44/47 (93%), Gaps = 1/47 (2%)
 Strand = Plus / Plus

                                                               
Query: 1        gaacgagcatttttgctatgatcaacaatgaaacaaatcaattacag 47
                |||||| ||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 29224174 gaacgaacatttctgctatgatcaacaatgaaac-aatcaattacag 29224219
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>gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, complete sequence
          Length = 209825

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     ttttctctttaatcatggcag 97
              |||||||||||||||||||||
Sbjct: 192606 ttttctctttaatcatggcag 192626
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>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence
          Length = 149103

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   gaaagaaagaaaaaccagagc 144
             |||||||||||||||||||||
Sbjct: 53129 gaaagaaagaaaaaccagagc 53109
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>gb|AC154049.1| Drosophila melanogaster clone BACR23M02, complete sequence
          Length = 126566

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   aaagaaagaaaaaccagagc 144
             ||||||||||||||||||||
Sbjct: 35139 aaagaaagaaaaaccagagc 35120
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>ref|NM_178629.2| Mus musculus RIKEN cDNA 4930579E17 gene (4930579E17Rik), mRNA
          Length = 3907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   attttctctttaatcatggc 95
            ||||||||||||||||||||
Sbjct: 1028 attttctctttaatcatggc 1009
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>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence
          Length = 170350

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   cctcacattccaaccccaaa 226
             ||||||||||||||||||||
Sbjct: 90055 cctcacattccaaccccaaa 90036
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>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence
          Length = 190724

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    gaaagaaagaaaaaccagag 143
              ||||||||||||||||||||
Sbjct: 108337 gaaagaaagaaaaaccagag 108318
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>gb|BC101900.1| Rattus norvegicus cDNA clone IMAGE:7932282
          Length = 2127

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  gggaaagaaagaaaaaccag 141
            ||||||||||||||||||||
Sbjct: 1296 gggaaagaaagaaaaaccag 1277
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>gb|AC114825.4| Mus musculus BAC clone RP24-104P22 from chromosome 3, complete sequence
          Length = 202237

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gaaagaaagaaaaaccagag 143
             ||||||||||||||||||||
Sbjct: 61504 gaaagaaagaaaaaccagag 61523
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>emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 in linkage group 8,
              complete sequence
          Length = 218043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    cacattccaaccccaaaaaa 229
              ||||||||||||||||||||
Sbjct: 184370 cacattccaaccccaaaaaa 184351
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>gb|AC115760.9| Mus musculus chromosome 14, clone RP23-62M14, complete sequence
          Length = 222533

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    ttggggattcattggcagca 274
              ||||||||||||||||||||
Sbjct: 206197 ttggggattcattggcagca 206178
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>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence
          Length = 213751

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   ttggggattcattggcagca 274
             ||||||||||||||||||||
Sbjct: 22497 ttggggattcattggcagca 22478
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>gb|AC007392.4| Homo sapiens BAC clone RP11-444B4 from 2, complete sequence
          Length = 193303

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 292    gattttcatctgaaaaaatataat 315
              ||||||||| ||||||||||||||
Sbjct: 141336 gattttcatttgaaaaaatataat 141359
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>gb|AC092107.5| Homo sapiens BAC clone RP11-755J8 from UL, complete sequence
          Length = 137617

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ttttcatctgaaaaaatata 313
             ||||||||||||||||||||
Sbjct: 98993 ttttcatctgaaaaaatata 99012
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>gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 150292

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    aaagaaagaaaaaccagagc 144
              ||||||||||||||||||||
Sbjct: 125736 aaagaaagaaaaaccagagc 125717
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>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three
              novel pseudogenes, a pseudogene similar to part of meprin
              A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of G protein-coupled receptor 116 (GPR116),
              two novel genes, the 5' end of a novel gene similar to
              ankyrin repeat domain 20A (ANKRD20A) and three CpG islands,
              complete sequence
          Length = 165886

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ttttcatctgaaaaaatata 313
              ||||||||||||||||||||
Sbjct: 154740 ttttcatctgaaaaaatata 154721
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>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a
             pseudogene similar to part of sorting nexin associated
             golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin
             repeat domain 20A, five novel genes, a pseudogene similar
             to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A)
             and a CpG island, complete sequence
          Length = 180498

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ttttcatctgaaaaaatata 313
             ||||||||||||||||||||
Sbjct: 99638 ttttcatctgaaaaaatata 99657
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>emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on chromosome 9 Contains part
             of the gene for the likely ortholog of mouse polydom
             (POLYDOM), complete sequence
          Length = 119077

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    catggcagggagagagagag 109
             ||||||||||||||||||||
Sbjct: 10739 catggcagggagagagagag 10720
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>emb|AL139123.15| Human DNA sequence from clone RP11-500G10 on chromosome 10 Contains
             three novel genes, a peptidylprolyl isomerase A
             (cyclophilin A) (PPIA) pseudogene, a meningioma expressed
             antigen 6 (MGEA6) pseudogene, a novel protein similar
             thioredoxin-like 2 (TXNL2) and four CpG islands, complete
             sequence
          Length = 209527

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    catggcagggagagagagag 109
             ||||||||||||||||||||
Sbjct: 18229 catggcagggagagagagag 18248
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>gb|AC105339.9| Homo sapiens chromosome 15, clone RP11-752G15, complete sequence
          Length = 175786

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    catggcagggagagagagag 109
             ||||||||||||||||||||
Sbjct: 64368 catggcagggagagagagag 64349
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>emb|AL133294.10| Human DNA sequence from clone RP5-1135K18 on chromosome 11p12-14.1
             Contains GSSs, complete sequence
          Length = 106265

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   gaaagaaagaaaaaccagag 143
             ||||||||||||||||||||
Sbjct: 44357 gaaagaaagaaaaaccagag 44338
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>emb|AL022396.1|HS380E11 Human DNA sequence from clone RP3-380E11 on chromosome 6p22.3-24
             Contains a novel gene and the 5' end of the CD83 gene for
             CD83 antigen (activated B lymphocytes, immunoglobulin
             superfamily) and three CpG islands, complete sequence
          Length = 131447

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    catggcagggagagagagag 109
             ||||||||||||||||||||
Sbjct: 78511 catggcagggagagagagag 78530
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>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a
             ribosomal protein L13 (Rpl13) pseudogene, a novel gene and
             two CpG islands, complete sequence
          Length = 215675

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   cacctcacattccaacccca 224
             ||||||||||||||||||||
Sbjct: 60697 cacctcacattccaacccca 60678
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>gb|AC092823.4| Homo sapiens 12 BAC RP11-235A16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159390

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aaatcaattacagcaggaag 54
              ||||||||||||||||||||
Sbjct: 140052 aaatcaattacagcaggaag 140033
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>gb|AC125394.27| Pan troglodytes clone rp43-45i3, complete sequence
          Length = 214480

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    ttttcatctgaaaaaatata 313
              ||||||||||||||||||||
Sbjct: 137687 ttttcatctgaaaaaatata 137706
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>gb|AC044907.16| Homo sapiens chromosome 15, clone RP11-127F21, complete sequence
          Length = 170793

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    catggcagggagagagagag 109
             ||||||||||||||||||||
Sbjct: 17497 catggcagggagagagagag 17516
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>gb|AF371315.1|AF371315 Debaryomyces hansenii protein kinase Pbs2p (PBS2) gene, complete cds
          Length = 3097

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   caacaatgaaacaaatcaat 42
            ||||||||||||||||||||
Sbjct: 1748 caacaatgaaacaaatcaat 1767
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>gb|BC024061.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cDNA clone
           IMAGE:5067437), partial cds
          Length = 2058

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  attttctctttaatcatggc 95
           ||||||||||||||||||||
Sbjct: 442 attttctctttaatcatggc 423
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>dbj|AK051322.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130033N01 product:hypothetical
           protein, full insert sequence
          Length = 2364

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  attttctctttaatcatggc 95
           ||||||||||||||||||||
Sbjct: 705 attttctctttaatcatggc 686
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>dbj|AK045940.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230325G10 product:hypothetical
            4-diphosphocytidyl-2C-methyl-D-erythritol synthase
            containing protein, full insert sequence
          Length = 1926

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   attttctctttaatcatggc 95
            ||||||||||||||||||||
Sbjct: 1162 attttctctttaatcatggc 1143
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>dbj|AK016317.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930579E17 product:hypothetical
           4-diphosphocytidyl-2C-methyl-D-erythritol synthase
           containing protein, full insert sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  attttctctttaatcatggc 95
           ||||||||||||||||||||
Sbjct: 709 attttctctttaatcatggc 690
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>dbj|AK039004.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched
            library, clone:A230084F24 product:hypothetical
            4-diphosphocytidyl-2C-methyl-D-erythritol synthase
            containing protein, full insert sequence
          Length = 3907

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   attttctctttaatcatggc 95
            ||||||||||||||||||||
Sbjct: 1028 attttctctttaatcatggc 1009
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>gb|BC050993.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cDNA clone
           IMAGE:6507154)
          Length = 2631

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  attttctctttaatcatggc 95
           ||||||||||||||||||||
Sbjct: 998 attttctctttaatcatggc 979
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>gb|BC086665.1| Mus musculus RIKEN cDNA 4930579E17 gene, mRNA (cDNA clone MGC:113755
            IMAGE:30612014), complete cds
          Length = 2709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   attttctctttaatcatggc 95
            ||||||||||||||||||||
Sbjct: 1091 attttctctttaatcatggc 1072
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>gb|AC097173.1| Homo sapiens BAC clone RP11-96A1 from 4, complete sequence
          Length = 175629

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     catggcagggagagagagag 109
              ||||||||||||||||||||
Sbjct: 119529 catggcagggagagagagag 119548
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>gb|AC139844.11| Mus musculus chromosome 15, clone RP23-342B21, complete sequence
          Length = 192176

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gaaagaaagaaaaaccagag 143
             ||||||||||||||||||||
Sbjct: 17533 gaaagaaagaaaaaccagag 17552
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>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence
          Length = 127075

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ttttcatctgaaaaaatata 313
             ||||||||||||||||||||
Sbjct: 29288 ttttcatctgaaaaaatata 29307
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>gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G20, complete sequence
          Length = 164823

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     catggcagggagagagagag 109
              ||||||||||||||||||||
Sbjct: 127601 catggcagggagagagagag 127620
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>dbj|AK181790.1| Mus musculus cDNA, clone:Y0G0119H03, strand:unspecified
          Length = 479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  attttctctttaatcatggc 95
           ||||||||||||||||||||
Sbjct: 129 attttctctttaatcatggc 148
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>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
              sequence
          Length = 219376

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ttttcatctgaaaaaatata 313
              ||||||||||||||||||||
Sbjct: 161259 ttttcatctgaaaaaatata 161240
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>gb|AC152943.1| Mus musculus 10 BAC RP23-225G5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198492

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     catggcagggagagagagag 109
              ||||||||||||||||||||
Sbjct: 158005 catggcagggagagagagag 157986
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>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence
          Length = 185393

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     catggcagggagagagagag 109
              ||||||||||||||||||||
Sbjct: 102482 catggcagggagagagagag 102463
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>emb|AL109720.1|IRO209544 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 209544
          Length = 737

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  catggcagggagagagagag 109
           ||||||||||||||||||||
Sbjct: 234 catggcagggagagagagag 253
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>emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-799P8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174788

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     catggcagggagagagagag 109
              ||||||||||||||||||||
Sbjct: 162192 catggcagggagagagagag 162173
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>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete
              sequence
          Length = 334222

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aaagaaagaaaaaccagagc 144
              ||||||||||||||||||||
Sbjct: 248162 aaagaaagaaaaaccagagc 248181
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>emb|AL732365.17| Mouse DNA sequence from clone RP23-357O2 on chromosome X, complete
              sequence
          Length = 192659

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    attttcatctgaaaaaatat 312
              ||||||||||||||||||||
Sbjct: 178165 attttcatctgaaaaaatat 178146
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>gb|AC147186.3| Mus musculus BAC clone RP24-112I5 from 3, complete sequence
          Length = 157929

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gaaagaaagaaaaaccagag 143
            ||||||||||||||||||||
Sbjct: 2303 gaaagaaagaaaaaccagag 2284
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>emb|AL713995.11| Mouse DNA sequence from clone RP23-423L9 on chromosome 4, complete
             sequence
          Length = 103260

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gaaagaaagaaaaaccagag 143
             ||||||||||||||||||||
Sbjct: 88328 gaaagaaagaaaaaccagag 88347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9,749,779
Number of Sequences: 3902068
Number of extensions: 9749779
Number of successful extensions: 214426
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 214151
Number of HSP's gapped (non-prelim): 275
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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