ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor... 28 7.1
2FGR_HUMAN (P09769) Proto-oncogene tyrosine-protein kinase FGR (E... 28 7.1

>I11RA_RAT (Q99MF4) Interleukin-11 receptor alpha chain precursor|
           (IL-11R-alpha) (IL-11RA)
          Length = 431

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +2

Query: 185 RPTSRPGSFTSPPLGVHDLREDRARRQP--VRVDARDALVAHAYGS 316
           RP   P   T  P+G+ +L  D     P  VRV ARD L A  + +
Sbjct: 261 RPAQHPAWSTVEPIGLEELITDAVAGLPHAVRVSARDFLDAGTWSA 306



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>FGR_HUMAN (P09769) Proto-oncogene tyrosine-protein kinase FGR (EC 2.7.10.2)|
           (P55-FGR) (C-FGR)
          Length = 529

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 278 RLGRADAERGLLADHEPQGA 219
           ++GR DAER LL+   PQGA
Sbjct: 148 KIGRKDAERQLLSPGNPQGA 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,701,411
Number of Sequences: 219361
Number of extensions: 689060
Number of successful extensions: 1346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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