ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D... 48 0.009
2gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, comp... 46 0.037
3gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, com... 46 0.037
4gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, co... 46 0.037
5ref|NM_001016394.2| Xenopus tropicalis hypothetical protein LOC5... 40 2.3
6gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete seq... 40 2.3
7gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, co... 40 2.3
8gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, comple... 40 2.3
9gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, c... 40 2.3
10gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, c... 40 2.3
11gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromos... 40 2.3
12gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, com... 40 2.3
13gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete... 40 2.3
14emb|CR761165.2| Xenopus tropicalis finished cDNA, clone TEgg054k06 40 2.3
15gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, com... 40 2.3
16gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, comple... 40 2.3
17gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 2.3
18emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on ch... 40 2.3
19dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3... 40 2.3
20dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 2.3
21gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence 38 9.0
22gb|AC159426.1| Trypanosoma brucei chromosome 7 clone RPCI93-27M1... 38 9.0
23gb|AC099728.6| Mus musculus chromosome 7, clone RP23-417I5, comp... 38 9.0
24emb|CR388016.11| Zebrafish DNA sequence from clone DKEY-106M5 in... 38 9.0
25ref|XM_817222.1| Trypanosoma brucei TREU927 hypothetical protein... 38 9.0
26gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, comp... 38 9.0
27gb|AC083867.7| Homo sapiens chromosome 7 clone RP11-183I20, comp... 38 9.0
28emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 i... 38 9.0
29emb|AL928636.8| Human DNA sequence from clone RP13-417F5 on chro... 38 9.0
30emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chr... 38 9.0
31emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on ch... 38 9.0
32emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chr... 38 9.0
33emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on ch... 38 9.0
34gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, co... 38 9.0
35emb|AL844518.5| Zebrafish DNA sequence from clone DKEY-83D9 in l... 38 9.0
36emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4,... 38 9.0
37emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in ... 38 9.0
38gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosom... 38 9.0
39emb|BX927175.11| Zebrafish DNA sequence from clone CH211-237C7 i... 38 9.0
40gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 38 9.0
41gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete s... 38 9.0
42gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosom... 38 9.0
43gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, co... 38 9.0
44emb|BX248522.9| Zebrafish DNA sequence from clone CH211-113B2 in... 38 9.0
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
49gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, comp... 38 9.0
50gb|AC101510.12| Mus musculus chromosome 3, clone RP23-190B7, com... 38 9.0
51gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complet... 38 9.0
52dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
53gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, comp... 38 9.0
54dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
55gb|AY633707.1| Lotus corniculatus dihydroflavonol reductase gene... 38 9.0
56dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
57dbj|AK069600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.0
58emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in... 38 9.0
59emb|BX927199.5| Zebrafish DNA sequence from clone CH211-265B3 in... 38 9.0
60emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on ch... 38 9.0
61emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e1... 38 9.0
62dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0
63gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 38 9.0
64dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 9.0
65gb|AY833551.1| Pisum sativum transposon mariner-like transposon ... 38 9.0
66dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.0 
>gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D9, complete sequence
          Length = 154318

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 132   tcctcttcttttctcatcattttctttg 159
             |||| |||||||||||||||||||||||
Sbjct: 21122 tccttttcttttctcatcattttctttg 21095
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>gb|AC145952.3| Pan troglodytes BAC clone RP43-18D16 from 7, complete sequence
          Length = 160354

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 139   cttttctcatcattttctttgat 161
             |||||||||||||||||||||||
Sbjct: 64635 cttttctcatcattttctttgat 64613
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>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 134    ctcttcttttctcatcattttct 156
              |||||||||||||||||||||||
Sbjct: 163429 ctcttcttttctcatcattttct 163451
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>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 134   ctcttcttttctcatcattttct 156
             |||||||||||||||||||||||
Sbjct: 66466 ctcttcttttctcatcattttct 66488
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>ref|NM_001016394.2| Xenopus tropicalis hypothetical protein LOC549148 (LOC549148), mRNA
          Length = 1594

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 139 cttttctcatcattttcttt 158
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100
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>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence
          Length = 222162

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    cttttctcatcattttcttt 158
              ||||||||||||||||||||
Sbjct: 115684 cttttctcatcattttcttt 115703
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>gb|AC105204.5| Homo sapiens chromosome 15, clone RP11-1087J2, complete sequence
          Length = 210658

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ttcttttctcatcattttct 156
             ||||||||||||||||||||
Sbjct: 65993 ttcttttctcatcattttct 66012
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>gb|AC112724.3| Homo sapiens BAC clone RP11-811L19 from 4, complete sequence
          Length = 42210

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   tcttcttttctcatcatttt 154
             ||||||||||||||||||||
Sbjct: 23110 tcttcttttctcatcatttt 23091
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>gb|AC079208.4| Homo sapiens chromosome 15, clone RP11-1149K15, complete sequence
          Length = 168252

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   ttcttttctcatcattttct 156
             ||||||||||||||||||||
Sbjct: 34307 ttcttttctcatcattttct 34288
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>gb|AC013551.10| Homo sapiens chromosome 15, clone RP11-133P13, complete sequence
          Length = 153823

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ttcttttctcatcattttct 156
             ||||||||||||||||||||
Sbjct: 30254 ttcttttctcatcattttct 30273
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>gb|AC150280.2| Pan troglodytes BAC clone CH251-20M5 from chromosome 7, complete
             sequence
          Length = 191966

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttttctcatcattttctttg 159
             ||||||||||||||||||||
Sbjct: 80407 ttttctcatcattttctttg 80388
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>gb|AC119189.8| Mus musculus chromosome 1, clone RP24-178E16, complete sequence
          Length = 182530

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     agacctatcgtgaaaaggaa 87
              ||||||||||||||||||||
Sbjct: 123743 agacctatcgtgaaaaggaa 123724
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>gb|AC147873.3| Monodelphis domestica clone VMRC6-582D4, complete sequence
          Length = 165359

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   cttcttttctcatcattttctttg 159
             ||||| ||||||||||||||||||
Sbjct: 54653 cttctattctcatcattttctttg 54676
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>emb|CR761165.2| Xenopus tropicalis finished cDNA, clone TEgg054k06
          Length = 1594

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 139 cttttctcatcattttcttt 158
           ||||||||||||||||||||
Sbjct: 119 cttttctcatcattttcttt 100
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>gb|AC115876.18| Mus musculus chromosome 1, clone RP24-356G6, complete sequence
          Length = 163698

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  ttctcatcattttctttgat 161
            ||||||||||||||||||||
Sbjct: 6082 ttctcatcattttctttgat 6101
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>gb|AC125525.3| Mus musculus BAC clone RP24-395H10 from 1, complete sequence
          Length = 195904

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   ttctcatcattttctttgat 161
             ||||||||||||||||||||
Sbjct: 12907 ttctcatcattttctttgat 12888
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    cttcttttctcatcattttctttg 159
              ||||| ||||||||||||||||||
Sbjct: 883826 cttctattctcatcattttctttg 883849
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>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete
             sequence
          Length = 201142

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   tcttcttttctcatcattttcttt 158
             ||||||||||| ||||||||||||
Sbjct: 47129 tcttcttttcttatcattttcttt 47106
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>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and
            complete cds
          Length = 5325

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    tacagcatcacaattgatgt 23
            ||||||||||||||||||||
Sbjct: 1045 tacagcatcacaattgatgt 1026
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>dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB611H5
          Length = 144828

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    ttcacccatttatcaagaaa 68
             ||||||||||||||||||||
Sbjct: 43968 ttcacccatttatcaagaaa 43949
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>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence
          Length = 2205233

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 150    attttctttgatcttttgt 168
              |||||||||||||||||||
Sbjct: 311873 attttctttgatcttttgt 311891
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>gb|AC159426.1| Trypanosoma brucei chromosome 7 clone RPCI93-27M11, complete sequence
          Length = 156973

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 150   attttctttgatcttttgt 168
             |||||||||||||||||||
Sbjct: 60025 attttctttgatcttttgt 60043
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>gb|AC099728.6| Mus musculus chromosome 7, clone RP23-417I5, complete sequence
          Length = 205550

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 142   ttctcatcattttctttgatctt 164
             |||||||||||| ||||||||||
Sbjct: 67387 ttctcatcatttactttgatctt 67365
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>emb|CR388016.11| Zebrafish DNA sequence from clone DKEY-106M5 in linkage group 16,
              complete sequence
          Length = 164212

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 148    tcattttctttgatctttt 166
              |||||||||||||||||||
Sbjct: 141213 tcattttctttgatctttt 141195
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>ref|XM_817222.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.7690)
           partial mRNA
          Length = 5058

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 36  caacaatagaaacttcacc 54
           |||||||||||||||||||
Sbjct: 87  caacaatagaaacttcacc 105
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>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence
          Length = 147107

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 139    cttttctcatcattttctttgat 161
              |||| ||||||||||||||||||
Sbjct: 114292 ctttcctcatcattttctttgat 114314
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>gb|AC083867.7| Homo sapiens chromosome 7 clone RP11-183I20, complete sequence
          Length = 148251

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   cttttctcatcattttctt 157
             |||||||||||||||||||
Sbjct: 79217 cttttctcatcattttctt 79199
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>emb|CR318664.15| Zebrafish DNA sequence from clone CH211-59L22 in linkage group 21,
              complete sequence
          Length = 161092

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     caattgatgtacctgtatg 32
              |||||||||||||||||||
Sbjct: 120877 caattgatgtacctgtatg 120859
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>emb|AL928636.8| Human DNA sequence from clone RP13-417F5 on chromosome X, complete
             sequence
          Length = 171922

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   ttttctcatcattttcttt 158
             |||||||||||||||||||
Sbjct: 80222 ttttctcatcattttcttt 80204
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>emb|AL392083.17| Human DNA sequence from clone RP11-29A19 on chromosome 10 Contains the 3'
              end of the gene for double-stranded RNA specific adenosine
              deaminase (ADAR3) (FLJ30545 FLJ25034 FLJ36975) and three
              CpG islands, complete sequence
          Length = 164741

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    ctcttcttttctcatcatt 152
              |||||||||||||||||||
Sbjct: 148696 ctcttcttttctcatcatt 148678
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>emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on chromosome 6 Contains part
              of the BAI3 gene for brain-specific angiogenesis inhibitor
              3, complete sequence
          Length = 127079

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 138    tcttttctcatcattttct 156
              |||||||||||||||||||
Sbjct: 108625 tcttttctcatcattttct 108607
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>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the 5'
              end of the GNAQ gene for guanine nucleotide binding protein
              (G protein) q polypeptide and a CpG island, complete
              sequence
          Length = 215399

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    ttttctcatcattttcttt 158
              |||||||||||||||||||
Sbjct: 173814 ttttctcatcattttcttt 173796
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>emb|AL138959.20| Human DNA sequence from clone RP11-214O11 on chromosome 13 Contains a
             nucleosome assembly protein 1-like 1 (NAP1L1) pseudogene
             and a ribosomal protein L27a (RPL27A) pseudogene, complete
             sequence
          Length = 168790

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   cttttctcatcattttctt 157
             |||||||||||||||||||
Sbjct: 19743 cttttctcatcattttctt 19761
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>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence
          Length = 221645

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 136   cttcttttctcatcatttt 154
             |||||||||||||||||||
Sbjct: 93208 cttcttttctcatcatttt 93226
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>emb|AL844518.5| Zebrafish DNA sequence from clone DKEY-83D9 in linkage group 21 Contains
              novel genes similar to vertebrate AQP3 (aquaporin 3),human
              and mouse VPS29 (vacuolar protein sorting 29 (yeast)), to
              human MGC14560 (x 0004 protein), human and mouse ARPC3
              (actin related protein 2/3 complex, subunit 3, 21kDa),
              human UBE2G1 (ubiquitin-conjugating enzyme E2G 1 (UBC7
              homolog, C. elegans)), vertebrate ATP2A2 (ATPase, Ca++
              transporting, cardiac muscle, slow twitch 2), human BCR
              (breakpoint cluster region) and three CpG islands, complete
              sequence
          Length = 242235

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 137    ttcttttctcatcattttctttg 159
              |||||||||| ||||||||||||
Sbjct: 143630 ttcttttctcctcattttctttg 143652
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>emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0067G11,
             complete sequence
          Length = 156983

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    atgggtcaacaatagaaac 48
             |||||||||||||||||||
Sbjct: 68253 atgggtcaacaatagaaac 68235
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>emb|BX908384.15| Zebrafish DNA sequence from clone DKEY-38K3 in linkage group 13, complete
              sequence
          Length = 213699

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    ttttctcatcattttcttt 158
              |||||||||||||||||||
Sbjct: 194391 ttttctcatcattttcttt 194373
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>gb|AC161583.2| Mus musculus BAC clone RP24-566C13 from chromosome 12, complete sequence
          Length = 171366

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     tttatcaagaaagacctat 75
              |||||||||||||||||||
Sbjct: 163619 tttatcaagaaagacctat 163601
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>emb|BX927175.11| Zebrafish DNA sequence from clone CH211-237C7 in linkage group 18,
            complete sequence
          Length = 97314

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 135  tcttcttttctcatcattt 153
            |||||||||||||||||||
Sbjct: 8715 tcttcttttctcatcattt 8733
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 149    cattttctttgatcttttg 167
              |||||||||||||||||||
Sbjct: 161618 cattttctttgatcttttg 161600
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>gb|AC121233.16| Medicago truncatula clone mth2-14g13, complete sequence
          Length = 129617

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   tcttcttttctcatcattt 153
             |||||||||||||||||||
Sbjct: 87717 tcttcttttctcatcattt 87699
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>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete
             sequence
          Length = 205679

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   ctatgatcctcttcttttc 144
             |||||||||||||||||||
Sbjct: 97083 ctatgatcctcttcttttc 97065
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>gb|AC023464.11| Homo sapiens chromosome 8, clone RP11-436D19, complete sequence
          Length = 160370

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 139   cttttctcatcattttctttgat 161
             |||| ||||||||||||||||||
Sbjct: 42277 ctttcctcatcattttctttgat 42299
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>emb|BX248522.9| Zebrafish DNA sequence from clone CH211-113B2 in linkage group 14,
             complete sequence
          Length = 104379

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 26/27 (96%), Gaps = 1/27 (3%)
 Strand = Plus / Minus

                                        
Query: 132   tcctcttcttttctcatcattttcttt 158
             |||||||||||||||||| ||||||||
Sbjct: 35312 tcctcttcttttctcatc-ttttcttt 35287
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 30       atgggtcaacaatagaaac 48
                |||||||||||||||||||
Sbjct: 11307063 atgggtcaacaatagaaac 11307045
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 30      atgggtcaacaatagaaac 48
               |||||||||||||||||||
Sbjct: 1672610 atgggtcaacaatagaaac 1672592
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 129      tgatcctcttcttttctcatcat 151
                ||||||||||| |||||||||||
Sbjct: 31529663 tgatcctcttcgtttctcatcat 31529641
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 152      tttctttgatcttttgtac 170
                |||||||||||||||||||
Sbjct: 10020731 tttctttgatcttttgtac 10020749
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>gb|AC120182.8| Mus musculus chromosome 1, clone RP24-501C2, complete sequence
          Length = 188506

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   ttcttttctcatcattttc 155
             |||||||||||||||||||
Sbjct: 41386 ttcttttctcatcattttc 41368
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>gb|AC101510.12| Mus musculus chromosome 3, clone RP23-190B7, complete sequence
          Length = 235744

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 149    cattttctttgatcttttg 167
              |||||||||||||||||||
Sbjct: 145627 cattttctttgatcttttg 145645
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>gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complete sequence
          Length = 178320

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 140  ttttctcatcattttcttt 158
            |||||||||||||||||||
Sbjct: 9121 ttttctcatcattttcttt 9139
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>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F09
          Length = 132713

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    tttctttgatcttttgtac 170
              |||||||||||||||||||
Sbjct: 101013 tttctttgatcttttgtac 101031
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>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence
          Length = 248543

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    ttcttttctcatcattttc 155
              |||||||||||||||||||
Sbjct: 233126 ttcttttctcatcattttc 233108
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>dbj|AP006062.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0415D04
          Length = 176627

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    atgggtcaacaatagaaac 48
             |||||||||||||||||||
Sbjct: 59182 atgggtcaacaatagaaac 59164
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>gb|AY633707.1| Lotus corniculatus dihydroflavonol reductase gene, complete cds
          Length = 2375

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 132 tcctcttcttttctcatcatttt 154
           ||||||| |||||||||||||||
Sbjct: 193 tcctctttttttctcatcatttt 215
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>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0431B06
          Length = 154796

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 129   tgatcctcttcttttctcatcat 151
             ||||||||||| |||||||||||
Sbjct: 20223 tgatcctcttcgtttctcatcat 20201
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>dbj|AK069600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024A11, full
            insert sequence
          Length = 2246

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 30   atgggtcaacaatagaaac 48
            |||||||||||||||||||
Sbjct: 2098 atgggtcaacaatagaaac 2080
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>emb|BX927240.11| Zebrafish DNA sequence from clone DKEY-16N13 in linkage group 18,
              complete sequence
          Length = 263615

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 135    tcttcttttctcatcattt 153
              |||||||||||||||||||
Sbjct: 250392 tcttcttttctcatcattt 250374
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>emb|BX927199.5| Zebrafish DNA sequence from clone CH211-265B3 in linkage group 18,
            complete sequence
          Length = 84981

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 135  tcttcttttctcatcattt 153
            |||||||||||||||||||
Sbjct: 7424 tcttcttttctcatcattt 7406
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>emb|CT025611.16| Mouse DNA sequence from clone RP24-100P15 on chromosome 12, complete
             sequence
          Length = 240699

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    tttatcaagaaagacctat 75
             |||||||||||||||||||
Sbjct: 26436 tttatcaagaaagacctat 26454
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>emb|CT573051.1| Medicago truncatula chromosome 5 clone mth2-15e15, COMPLETE SEQUENCE
          Length = 117939

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 138   tcttttctcatcattttctttga 160
             ||||||||||| |||||||||||
Sbjct: 34644 tcttttctcataattttctttga 34666
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>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 152   tttctttgatcttttgtac 170
             |||||||||||||||||||
Sbjct: 48288 tttctttgatcttttgtac 48306
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 140     ttttctcatcattttcttt 158
               |||||||||||||||||||
Sbjct: 5134630 ttttctcatcattttcttt 5134648
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>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133,
              complete sequence
          Length = 106411

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    ttttctcatcattttcttt 158
              |||||||||||||||||||
Sbjct: 103540 ttttctcatcattttcttt 103522
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>gb|AY833551.1| Pisum sativum transposon mariner-like transposon Psmar-2, complete
            sequence
          Length = 4637

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 148  tcattttctttgatctttt 166
            |||||||||||||||||||
Sbjct: 2910 tcattttctttgatctttt 2892
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>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 152    tttctttgatcttttgtac 170
              |||||||||||||||||||
Sbjct: 115224 tttctttgatcttttgtac 115242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,102,828
Number of Sequences: 3902068
Number of extensions: 2102828
Number of successful extensions: 176610
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 176234
Number of HSP's gapped (non-prelim): 377
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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