ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl43d07 |
|---|---|
| Clone Library Name | barley_pub |
>PLDA1_ORYSA (Q43007) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha| 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 150 bits (378), Expect = 2e-36 Identities = 67/77 (87%), Positives = 76/77 (98%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES+ECVQKVNRIA+KYWD+YSSDDL+QDLPGHLLSYPIGVA+DGVVTELPGME+FPDTR Sbjct: 736 PESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTR 795 Query: 265 ARILGTKSDYLPPILTT 215 AR+LG KSDY+PPILT+ Sbjct: 796 ARVLGAKSDYMPPILTS 812
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 145 bits (367), Expect = 3e-35 Identities = 68/77 (88%), Positives = 71/77 (92%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PESVECVQKVN +A+KYWDLYSSDDLEQDLPGHLLSYPIGV DG VTELPGME FPDTR Sbjct: 736 PESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTR 795 Query: 265 ARILGTKSDYLPPILTT 215 AR+LG KSDYLPPILTT Sbjct: 796 ARVLGNKSDYLPPILTT 812
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 137 bits (346), Expect = 9e-33 Identities = 61/77 (79%), Positives = 70/77 (90%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 P S+EC++KVNRI+DKYWD YSS+ LE DLPGHLL YPIGVA++G +TELPG EFFPDT+ Sbjct: 734 PSSLECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTK 793 Query: 265 ARILGTKSDYLPPILTT 215 ARILGTKSDYLPPILTT Sbjct: 794 ARILGTKSDYLPPILTT 810
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 137 bits (344), Expect = 2e-32 Identities = 63/77 (81%), Positives = 70/77 (90%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES ECV KVNR+ADKYWDLYSS+ LE+DLPGHLL YPIGVA++G VTELPG E FPDT+ Sbjct: 732 PESEECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTK 791 Query: 265 ARILGTKSDYLPPILTT 215 AR+LGTKSDYLPPILTT Sbjct: 792 ARVLGTKSDYLPPILTT 808
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 137 bits (344), Expect = 2e-32 Identities = 62/77 (80%), Positives = 70/77 (90%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES EC+ KVN+IADKYWDLYSS+ LE+DLPGHLL YPIGVA++G VTELPG EFFPDT+ Sbjct: 733 PESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTK 792 Query: 265 ARILGTKSDYLPPILTT 215 ARILG K+DYLPPILTT Sbjct: 793 ARILGAKADYLPPILTT 809
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 136 bits (343), Expect = 2e-32 Identities = 60/77 (77%), Positives = 69/77 (89%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 P S EC+QKVNR+ADKYWDLYSS+ LE DLPGHLL YPIG+A++G +TELPG EFFPDT+ Sbjct: 734 PSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTK 793 Query: 265 ARILGTKSDYLPPILTT 215 ARILG KSDY+PPILTT Sbjct: 794 ARILGVKSDYMPPILTT 810
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 134 bits (338), Expect = 8e-32 Identities = 61/77 (79%), Positives = 69/77 (89%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PESV+CVQKVN +ADKYWDLYSS+ LE DLPGHLL YPI VA++G VTELPG EFFPDT+ Sbjct: 732 PESVDCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTK 791 Query: 265 ARILGTKSDYLPPILTT 215 AR+LG KSD+LPPILTT Sbjct: 792 ARVLGAKSDFLPPILTT 808
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 134 bits (337), Expect = 1e-31 Identities = 61/77 (79%), Positives = 70/77 (90%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES ECV+KVN++A+KYWDLYSS+ LE DLPGHLL YPIGVA++G VTELPG EFFPDT+ Sbjct: 732 PESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTK 791 Query: 265 ARILGTKSDYLPPILTT 215 AR+LG KSDYLPPILTT Sbjct: 792 ARVLGAKSDYLPPILTT 808
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 133 bits (335), Expect = 2e-31 Identities = 60/77 (77%), Positives = 67/77 (87%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 P SVEC++KVNRI+DKYWDLYSS+ LE DLPGHLL YP+ V +G VTE PG EFFPDT+ Sbjct: 734 PSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTK 793 Query: 265 ARILGTKSDYLPPILTT 215 ARILGTKSDYLPPILTT Sbjct: 794 ARILGTKSDYLPPILTT 810
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 130 bits (327), Expect = 1e-30 Identities = 58/77 (75%), Positives = 66/77 (85%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 P S+EC++KVNRIADKYWD YSS+ LE DLPGHLL YPI V N+G +TELPG EFFPD++ Sbjct: 736 PSSLECIEKVNRIADKYWDFYSSESLEHDLPGHLLRYPISVDNEGNITELPGFEFFPDSK 795 Query: 265 ARILGTKSDYLPPILTT 215 ARILG K DYLPPILTT Sbjct: 796 ARILGNKVDYLPPILTT 812
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 118 bits (295), Expect = 8e-27 Identities = 52/77 (67%), Positives = 66/77 (85%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES+ECVQ+VN++ADKYWDLY+SD+L DLPGHLL+YP+ V +G VTELPG +FFPDT+ Sbjct: 743 PESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQ 802 Query: 265 ARILGTKSDYLPPILTT 215 A ++GTK + LPP LTT Sbjct: 803 APVIGTKGN-LPPFLTT 818
>PLDZ1_ARATH (P58766) Phospholipase D zeta (EC 3.1.4.4) (AtPLDzeta) (PLD zeta)| Length = 820 Score = 100 bits (249), Expect = 2e-21 Identities = 46/79 (58%), Positives = 60/79 (75%), Gaps = 2/79 (2%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQ--DLPGHLLSYPIGVANDGVVTELPGMEFFPD 272 PES EC++ VN AD+ W LYS+ + + DLPGHLLSYPI + ++G VT L G EFFPD Sbjct: 742 PESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPD 801 Query: 271 TRARILGTKSDYLPPILTT 215 T A+++G KS+YLPPILT+ Sbjct: 802 TNAKVVGEKSNYLPPILTS 820
>PLDE1_ARATH (Q9C888) Phospholipase D epsilon (EC 3.1.4.4) (AtPLDepsilon) (PLD| epsilon) (PLDalpha3) Length = 762 Score = 71.6 bits (174), Expect = 8e-13 Identities = 34/77 (44%), Positives = 49/77 (63%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES+ECV+ + I ++ W++YS D + L HL++YPI V DG V E+ G FPDT+ Sbjct: 687 PESLECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPDTK 745 Query: 265 ARILGTKSDYLPPILTT 215 + G +S PP+LTT Sbjct: 746 TLVKGKRSKMFPPVLTT 762
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 65.1 bits (157), Expect = 8e-11 Identities = 27/66 (40%), Positives = 47/66 (71%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PE++ECV++V ++++ W Y+++++ + +PGHLL YP+ V G V+ LPG E FPD Sbjct: 792 PENMECVRRVRQLSELNWRQYAAEEVTE-MPGHLLKYPVQVDRTGKVSSLPGYETFPDLG 850 Query: 265 ARILGT 248 +I+G+ Sbjct: 851 GKIIGS 856
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 65.1 bits (157), Expect = 8e-11 Identities = 29/66 (43%), Positives = 43/66 (65%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES+ECV+KV + ++ W ++++++ D+ GHLL YP+ V G V LPG E FPD Sbjct: 893 PESIECVRKVRTMGERNWKQFAAEEVS-DMRGHLLKYPVEVDRKGKVRPLPGSETFPDVG 951 Query: 265 ARILGT 248 I+GT Sbjct: 952 GNIVGT 957
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD delta)| Length = 868 Score = 65.1 bits (157), Expect = 8e-11 Identities = 33/77 (42%), Positives = 46/77 (59%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 P +EC++KVN I+++ W + D +L GHL+ YP+ V DG V+ LP E FPD Sbjct: 793 PSDLECLKKVNTISEENWKRFI-DPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVG 851 Query: 265 ARILGTKSDYLPPILTT 215 +I+G S LP LTT Sbjct: 852 GKIIGAHSMALPDTLTT 868
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 62.4 bits (150), Expect = 5e-10 Identities = 26/66 (39%), Positives = 46/66 (69%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PE++ECV++V ++++ W Y+++++ + + GHLL YP+ V G V+ LPG E FPD Sbjct: 750 PENMECVRRVRQLSELNWGQYAAEEVTE-MSGHLLKYPVQVDKTGKVSSLPGCETFPDLG 808 Query: 265 ARILGT 248 +I+G+ Sbjct: 809 GKIIGS 814
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 62.0 bits (149), Expect = 6e-10 Identities = 26/66 (39%), Positives = 46/66 (69%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PE++ECV++V ++++ W Y+++++ + + GHLL YP+ V G V+ LPG E FPD Sbjct: 784 PENMECVRRVRQLSELNWRQYAAEEVTE-MSGHLLKYPVQVDRTGKVSSLPGCETFPDLG 842 Query: 265 ARILGT 248 +I+G+ Sbjct: 843 GKIIGS 848
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 60.5 bits (145), Expect = 2e-09 Identities = 26/66 (39%), Positives = 43/66 (65%) Frame = -2 Query: 445 PESVECVQKVNRIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVVTELPGMEFFPDTR 266 PES+ CV+KV +A++ W+ + S+++ + + GHL+ YP+ V G V LPG E FPD Sbjct: 841 PESLGCVRKVRTVAEENWEQFRSEEVSE-MRGHLMKYPVEVDRKGKVRPLPGSEEFPDVG 899 Query: 265 ARILGT 248 ++G+ Sbjct: 900 GNVVGS 905
>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3| Length = 622 Score = 33.1 bits (74), Expect = 0.32 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = -1 Query: 311 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 216 R G H HP PHP+ L SPHP H Sbjct: 386 RPHGLPQHPQRSPHPAPHPQQHSQLQSPHPQH 417
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 32.3 bits (72), Expect = 0.55 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = -1 Query: 311 RGDGAAWHGVLPRHPGPHPRHQVGLPSPHPHH 216 R G H P+HP PHP+ L PH H Sbjct: 387 RPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQH 418
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/36 (50%), Positives = 19/36 (52%) Frame = +2 Query: 170 TTKPRPHTGNAGRNLCGEDGGKVVRLGAEDAGPGVG 277 TT PR H G LC E G VR ED GPG+G Sbjct: 49 TTGPRAHIGGGALALCPESSG--VR---EDGGPGLG 79
>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor| Length = 402 Score = 30.0 bits (66), Expect = 2.7 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -1 Query: 272 HPGPHPRHQVGLPSPHPHH 216 HP PHP H P PHPHH Sbjct: 212 HPHPHP-HPHPHPHPHPHH 229
>HNF3B_MOUSE (P35583) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 459 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = +1 Query: 55 PPIVTTAFLNHAHHCAY*LSHNYNNLLFSETQVLNHQRNHQTEATHRKCRTQSMW*GWGE 234 P + A L HH A+ + NNL+ SE Q + +HQ K Q M G Sbjct: 357 PGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGGY 416 Query: 235 GS 240 GS Sbjct: 417 GS 418
>SMCA4_HUMAN (P51532) Probable global transcription activator SNF2L4 (EC| 3.6.1.-) (ATP-dependent helicase SMARCA4) (SNF2-beta) (BRG-1 protein) (Mitotic growth and transcription activator) (Brahma protein homolog 1) (SWI/SNF-related matrix-associated actin Length = 1647 Score = 29.3 bits (64), Expect = 4.6 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Frame = +3 Query: 177 NRGHTPEMQDAIYVVR-------MGGR*SDLVPRMRARVSGKNSMPGSSVTTPSLATP 329 NRG TP Q+ ++ +R M R L ++ V GK MPG P+L P Sbjct: 166 NRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPP 223
>HNF3B_RAT (P32182) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 458 Score = 28.9 bits (63), Expect = 6.0 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = +1 Query: 55 PPIVTTAFLNHAHHCAY*LSHNYNNLLFSETQVLNHQRNHQTEATHRKCRTQSMW*GWGE 234 P + A L HH A+ + NNL+ SE Q + +HQ K Q M G Sbjct: 356 PGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKTYEQVMHYPGGY 415 Query: 235 GS 240 GS Sbjct: 416 GS 417
>PRGR_CHICK (P07812) Progesterone receptor (PR)| Length = 786 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/56 (25%), Positives = 25/56 (44%) Frame = +3 Query: 168 EPPNRGHTPEMQDAIYVVRMGGR*SDLVPRMRARVSGKNSMPGSSVTTPSLATPMG 335 +PP G P ++ +Y L+P + +S+P +S P L +P+G Sbjct: 319 QPPRAGQEPSLECVLYKAE-----PPLLPGAYGPPAAPDSLPSTSAAPPGLYSPLG 369
>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region| Length = 153 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 Query: 272 HPGPHPRHQVGLPSPHPHH 216 HP PH H P+P PHH Sbjct: 46 HPHPHTPHPHTTPTPTPHH 64
>CMC2_HUMAN (Q9UJS0) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 675 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 287 GVLPRHPGPHPRHQVGLPSPHPHHI 213 GV P P P+ ++ LP+P+P H+ Sbjct: 613 GVKPMGSEPVPKSRINLPAPNPDHV 637
>K0195_HUMAN (Q12767) Protein KIAA0195 (Transmembrane protein 94)| Length = 1356 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 332 HWCRQRRRGDGAAWHGVLPRHPGPHPRHQVGLPSPHP 222 H ++ RGD W G P+ P P+ H+ S HP Sbjct: 479 HLSNEQERGD---WPGEAPKPPEPYSHHKAHGRSKHP 512
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 7/46 (15%) Frame = -1 Query: 335 PHWCRQRRRGDGAAWHGVLPRHPGPHPRHQVG-------LPSPHPH 219 PH +Q+ G G P PG P H G LP PHPH Sbjct: 107 PHMQQQQHHG------GPAPPPPGGAPEHAPGVKEEYTHLPPPHPH 146
>CMC2_MACFA (Q8HXW2) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 674 Score = 28.5 bits (62), Expect = 7.9 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = -1 Query: 287 GVLPRHPGPHPRHQVGLPSPHPHHI 213 GV P P P+ ++ LP+P+P H+ Sbjct: 612 GVKPMGSEPVPKSRINLPAPNPDHV 636
>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)| Length = 2414 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Frame = +3 Query: 39 VATHQSSYSHYRVSQPCTPLRL----LTVPQL*QPAIF*NTSSESPKEPPNRGHTP 194 V+ Q S S V+ P P + PQL QPA+ N+ S P P HTP Sbjct: 791 VSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTP 846
>RPOA_LDVC (Q06502) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1 Length = 3637 Score = 28.5 bits (62), Expect = 7.9 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Frame = -2 Query: 412 RIADKYWDLYSSDDLEQDLPGHLLSYPIGVANDGVV-----TELPGMEFFPDTRARILGT 248 R K L+ D LE + L P+ V +D VV +ELP FF D +LG Sbjct: 2701 RCGHKVGGLFLRDSLEMEQLFEL--QPLLVYSDDVVLYDESSELPNYHFFVDHLDLMLGF 2758 Query: 247 KSDYLPPILTT 215 K+D ++T+ Sbjct: 2759 KTDRSKTVITS 2769 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,548,078 Number of Sequences: 219361 Number of extensions: 1477161 Number of successful extensions: 4336 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4062 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4310 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
