Clone Name | rbastl43d07 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence Length = 2997 Score = 383 bits (193), Expect = e-103 Identities = 226/237 (95%) Strand = Plus / Minus Query: 210 atctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgg 269 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccgaggatgcgggcccgg 2512 Query: 270 gtgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacacca 329 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || Sbjct: 2511 gtgtcggggaagaactccatgcccggcagctccgtcaccacgccgtcgctggcgacgccg 2452 Query: 330 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataag 389 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 2451 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctcgagtatatg 2392 Query: 390 tcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctccggg 446 ||||||||||| || |||||||||||||||||||| || |||||||||||||||||| Sbjct: 2391 tcccagtacttctccgcgatcctgttcaccttctgcacgcactcgacgctctccggg 2335 Score = 168 bits (85), Expect = 1e-38 Identities = 100/105 (95%) Strand = Plus / Minus Query: 62 tagtcactaccgcgtttctcaaccatgcacaccactgcgcttattaactgtcccacaact 121 |||||||||||| | ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2712 tagtcactaccgtggttctcaaccatgcacaccactgcgcttattaacagtcccgcaact 2653 Query: 122 ataacaacctgctattttctgaaacacaagttctgaatcaccaaa 166 |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2652 ataacagcctgctattttctgaaacacaagttctgaatcaccaaa 2608
>dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H06, full insert sequence Length = 1084 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 769 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 710 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 709 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 650 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 649 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 590 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 589 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 538
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Plus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 3723982 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 3724041 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 3724042 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 3724101 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 3724102 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 3724161 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 3724162 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 3724213
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Plus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 132462 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 132521 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 132522 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 132581 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 132582 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 132641 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 132642 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 132693
>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full insert sequence Length = 2851 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2553 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2494 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 2493 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2434 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2433 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2374 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 2373 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 2322
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 5333 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 5274 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 5273 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 5214 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 5213 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 5154 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 5153 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 5102
>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D, complete cds Length = 2990 Score = 230 bits (116), Expect = 3e-57 Identities = 203/232 (87%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2621 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2562 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||||| |||| Sbjct: 2561 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2502 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2501 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2442 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| || |||||||||||||||||||| |||||||| | |||||| Sbjct: 2441 cccagtacttctccgcgatcctgttcaccttctgcacacactccaggctctc 2390
>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full insert sequence Length = 2831 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 |||||| ||||||||||||||| | ||| |||||||||| |||||||| ||||||||| | Sbjct: 2559 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2500 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 |||| || ||| ||||||| || |||||||| |||||||| || ||| ||||| | |||| Sbjct: 2499 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcggcgccaa 2440 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 |||||||||| || |||||||| ||||||||||||| ||||||||||||||||| | || Sbjct: 2439 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2380 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactc 433 |||||||||| || |||||||||||||||||||| |||||||| Sbjct: 2379 cccagtacttctccgcgatcctgttcaccttctgcacacactc 2337
>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence Length = 2876 Score = 190 bits (96), Expect = 3e-45 Identities = 198/232 (85%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| |||| Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 ||||||||||| |||||| || |||||||| || || ||||||| | |||||| | Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | || Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| ||||||| | |||||||||||| |||||||| |||||||| Sbjct: 2366 cccagtacttctcggcgacctcgttcaccttctgcacacactctacgctctc 2315
>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds Length = 2793 Score = 190 bits (96), Expect = 3e-45 Identities = 198/232 (85%) Strand = Plus / Minus Query: 211 tctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 270 ||||||||||||||||||| || ||||| ||||||||| | ||||||| |||||| |||| Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487 Query: 271 tgtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaa 330 ||||||||||| |||||| || |||||||| || || ||||||| | |||||| | Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427 Query: 331 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 390 | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | || Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367 Query: 391 cccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||| ||||||| | |||||||||||| |||||||| |||||||| Sbjct: 2366 cccagtacttctcggcgacctcgttcaccttctgcacacactctacgctctc 2315
>gb|AY105267.1| Zea mays PCO139922 mRNA sequence Length = 541 Score = 123 bits (62), Expect = 5e-25 Identities = 137/162 (84%) Strand = Plus / Plus Query: 212 ctatgtggtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggt 271 |||||||||||||||||| || ||||| ||||||||| ||||||||| |||||| ||||| Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccgaggacgcgggcacgggt 412 Query: 272 gtcggggaagaactccatgccaggcagctccgtcaccacgccgtcgttggcgacaccaat 331 ||| |||||| |||||| || |||||||| || || ||||||| | |||||| || Sbjct: 413 gtcagggaagttctccatcccgggcagctcagtaacggtgccgtcggcagtgacaccgat 472 Query: 332 ggggtagctcagcaggtggccggggaggtcctgctccaggtc 373 |||||||| || |||||||| |||||||||||||||||||| Sbjct: 473 cgggtagctgaggaggtggcccgggaggtcctgctccaggtc 514
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 63.9 bits (32), Expect = 4e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 293 |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| Sbjct: 83490 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 83549 Query: 294 ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 353 || |||| ||| | ||||||| |||||| || | ||||||| | |||||||||||| Sbjct: 83550 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 83609 Query: 354 gggaggtc 361 |||||||| Sbjct: 83610 gggaggtc 83617
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 4e-07 Identities = 104/128 (81%) Strand = Plus / Plus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgcca 293 |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| ||| Sbjct: 4197011 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 4197070 Query: 294 ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 353 || |||| ||| | ||||||| |||||| || | ||||||| | |||||||||||| Sbjct: 4197071 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 4197130 Query: 354 gggaggtc 361 |||||||| Sbjct: 4197131 gggaggtc 4197138
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 389 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| Sbjct: 23547991 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctc 23547938
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 389 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| Sbjct: 28955 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctc 28902
>dbj|AK100365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083O10, full insert sequence Length = 2430 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 405 gcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||||||||||||| |||||||| | |||||| Sbjct: 2428 gcgatcctgttcaccttctgcacacactccaggctctc 2391
>dbj|AK072121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122J23, full insert sequence Length = 3145 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 389 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| Sbjct: 2418 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctc 2365
>dbj|AK066556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073D11, full insert sequence Length = 1353 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 405 gcgatcctgttcaccttctggacacactcgacgctctc 442 |||||||||||||||||||| |||||||| | |||||| Sbjct: 1351 gcgatcctgttcaccttctgcacacactccaggctctc 1314
>dbj|AB001919.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5169 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 389 gtcccagtacttgtcggcgatcctgttcaccttctggacacactcgacgctctc 442 ||||||||||||||| || ||| |||||||| |||| |||||||| | |||||| Sbjct: 4733 gtcccagtacttgtcagccatcttgttcaccctctgaacacactccaggctctc 4680
>gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha (PLDa1) mRNA, complete cds Length = 2877 Score = 48.1 bits (24), Expect = 0.025 Identities = 57/68 (83%) Strand = Plus / Minus Query: 219 gtgaggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggtgtcgggg 278 ||||||||||| || |||||||| || ||||| ||||| || || || |||||||||| Sbjct: 2527 gtgaggatgggagggaggtagtcggatttggtaccgagtatacgagctttggtgtcgggg 2468 Query: 279 aagaactc 286 |||||||| Sbjct: 2467 aagaactc 2460
>dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D alpha 2, complete cds Length = 3913 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 327 ccaatggggtagctcagcaggtggccggggaggtc 361 |||| |||||||| ||| ||||||||||||||||| Sbjct: 3578 ccaacggggtagcgcagaaggtggccggggaggtc 3544
>dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D alpha 2, complete cds Length = 2724 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 327 ccaatggggtagctcagcaggtggccggggaggtc 361 |||| |||||||| ||| ||||||||||||||||| Sbjct: 2363 ccaacggggtagcgcagaaggtggccggggaggtc 2329
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Minus Query: 213 tatgtggtgaggatggggggaag 235 ||||||||||||||||||||||| Sbjct: 92801 tatgtggtgaggatggggggaag 92779
>ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1); phospholipase D AT3G15730 (PLDALPHA1) mRNA, complete cds Length = 2795 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 283 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 2502 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 2453
>gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence Length = 718 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 283 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 696 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 647
>gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 mRNA, complete cds Length = 1886 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 283 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 1597 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1548
>gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, complete cds Length = 1572 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 283 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 1550 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1501
>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11 Length = 81370 Score = 44.1 bits (22), Expect = 0.38 Identities = 43/50 (86%) Strand = Plus / Minus Query: 234 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 283 |||||||| || |||||||||||||| |||||| ||||| |||||||| Sbjct: 42804 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 42755
>gb|AF451980.2| Papaver somniferum phospholipase D2 (PLD2) mRNA, complete cds Length = 2636 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 390 tcccagtacttgtcggcgatcctgttcaccttctggacaca 430 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2264 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2224
>gb|AF451979.2| Papaver somniferum phospholipase D1 (PLD1) mRNA, complete cds Length = 2679 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 390 tcccagtacttgtcggcgatcctgttcaccttctggacaca 430 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2264 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2224
>emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkaline phosphatase Length = 2292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 caccacgccgtcgttggcgac 325 ||||||||||||||||||||| Sbjct: 1948 caccacgccgtcgttggcgac 1928
>dbj|BS000229.1| Pan troglodytes chromosome 22 clone:RP43-015P20, map 22, complete sequences Length = 179285 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aagaactccatgccaggcagc 299 ||||||||||||||||||||| Sbjct: 53521 aagaactccatgccaggcagc 53541
>gb|AF113918.1|AF113918 Brassica oleracea var. capitata phospholipase D1 (PLD1) gene, complete cds Length = 3404 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 375 tcgctggagtataagtcccagtacttgtc 403 ||||| |||||||||||||| |||||||| Sbjct: 3241 tcgctcgagtataagtcccaatacttgtc 3213
>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aagaactccatgccaggcagc 299 ||||||||||||||||||||| Sbjct: 146957 aagaactccatgccaggcagc 146977
>gb|AF090445.1|AF090445 Brassica oleracea phospholipase D1 (PLD1) mRNA, complete cds Length = 2793 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 375 tcgctggagtataagtcccagtacttgtc 403 ||||| |||||||||||||| |||||||| Sbjct: 2353 tcgctcgagtataagtcccaatacttgtc 2325
>gb|AF451982.2| Papaver somniferum phospholipase D2 (PLD2) gene, complete cds Length = 2828 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 390 tcccagtacttgtcggcgatcctgttcaccttctggacaca 430 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2624 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2584
>gb|AF451981.2| Papaver somniferum phospholipase D1 (PLD1) gene, complete cds Length = 2829 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 390 tcccagtacttgtcggcgatcctgttcaccttctggacaca 430 |||||||| || || ||||||||||||||||| || ||||| Sbjct: 2624 tcccagtatttatcagcgatcctgttcaccttttgcacaca 2584
>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171 region, complete sequence Length = 145762 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aagaactccatgccaggcagc 299 ||||||||||||||||||||| Sbjct: 78005 aagaactccatgccaggcagc 78025
>dbj|AB017602.1| Homo sapiens PDE9A gene for cGMP phosphodiesterase, complete cds Length = 125000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aagaactccatgccaggcagc 299 ||||||||||||||||||||| Sbjct: 1390 aagaactccatgccaggcagc 1410
>gb|BC032099.2| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone MGC:20502 IMAGE:4126360), complete cds Length = 3190 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 936 gtggtgaggatggggggaag 955
>gb|BC013725.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3859726), partial cds Length = 2508 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 246 gtggtgaggatggggggaag 265
>ref|XM_525221.1| PREDICTED: Pan troglodytes similar to Pygopus homolog 2 (LOC469836), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 626 gtggtgaggatggggggaag 645
>ref|XM_593770.2| PREDICTED: Bos taurus similar to Pygopus homolog 2 (LOC540401), mRNA Length = 1773 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 1106 gtggtgaggatggggggaag 1125
>ref|NM_138300.3| Homo sapiens pygopus homolog 2 (Drosophila) (PYGO2), mRNA Length = 3227 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 970 gtggtgaggatggggggaag 989
>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence Length = 225152 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 tttctgaaacacaagttctg 156 |||||||||||||||||||| Sbjct: 136964 tttctgaaacacaagttctg 136945
>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the PMVK gene for phosphomevalonate kinase, the PBXIP1 gene for pre-B-cell leukemia transcription factor interacting protein 1, the gene for pygopus 2 (PYGO2), the SHC1 gene for SHC (Src homology 2 domain containing) transforming protein 1, the CKS1B gene for CDC28 protein kinase regulatory subunit 1B, the gene for FAD-synthetase (PP591), the LENEP gene for lens epithelial protein, the ZFP67 gene for zinc finger protein 67 homolog (mouse), the gene for a novel protein (FLJ32934), a novel gene, the gene for a novel protein (FLJ32785) the 5' end of the ADAM15 gene for a disintegrin and metalloproteinase domain 15 (metargidin), and two CpG islands, complete sequence Length = 182166 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 87674 gtggtgaggatggggggaag 87655
>emb|CR860452.1| Pongo pygmaeus mRNA; cDNA DKFZp459G041 (from clone DKFZp459G041) Length = 3222 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 993 gtggtgaggatggggggaag 1012
>emb|CR624320.1| full-length cDNA clone CS0DL007YH03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2734 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 540 gtggtgaggatggggggaag 559
>dbj|AK095899.1| Homo sapiens cDNA FLJ38580 fis, clone HCHON2008582, highly similar to FERRITIN HEAVY CHAIN Length = 2034 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 810 gtggtgaggatggggggaag 829
>dbj|AK092389.1| Homo sapiens cDNA FLJ35070 fis, clone PLACE5000139 Length = 3128 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 919 gtggtgaggatggggggaag 938
>dbj|AK090545.1| Homo sapiens cDNA FLJ33226 fis, clone ASTRO2001029 Length = 2497 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 288 gtggtgaggatggggggaag 307
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 taaagtatccaagtctcatattac 31 |||| ||||||||||||||||||| Sbjct: 2285010 taaactatccaagtctcatattac 2284987
>gb|AF457208.1| Homo sapiens pygopus 2 (PYGO2) mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 764 gtggtgaggatggggggaag 783
>gb|AF289598.1|AF289598 Homo sapiens clone pp7910 unknown mRNA Length = 2977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 720 gtggtgaggatggggggaag 739
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ggcgatcctgttcaccttct 423 |||||||||||||||||||| Sbjct: 3543937 ggcgatcctgttcaccttct 3543956
>ref|XM_309387.2| Anopheles gambiae str. PEST ENSANGP00000014937 (ENSANGG00000012448), partial mRNA Length = 2436 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 tgtcggcgatcctgttcacc 419 |||||||||||||||||||| Sbjct: 1376 tgtcggcgatcctgttcacc 1395
>gb|BC006132.1| Homo sapiens pygopus homolog 2 (Drosophila), mRNA (cDNA clone MGC:13050 IMAGE:3627860), complete cds Length = 3193 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 gtggtgaggatggggggaag 235 |||||||||||||||||||| Sbjct: 936 gtggtgaggatggggggaag 955
>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18, complete sequence Length = 94961 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ctataacaacctgctattttctga 143 |||||||| ||||||||||||||| Sbjct: 39144 ctataacaccctgctattttctga 39167
>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial sequence Length = 1893 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tgaatcaccaaaggaaccac 174 |||||||||||||||||||| Sbjct: 238 tgaatcaccaaaggaaccac 219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,133,707 Number of Sequences: 3902068 Number of extensions: 3133707 Number of successful extensions: 69325 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69155 Number of HSP's gapped (non-prelim): 165 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)