ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CCRK_HUMAN (Q8IZL9) Cell cycle-related kinase (EC 2.7.11.22) (Cy... 30 1.4
2CCRK_PONPY (Q5R7I7) Cell cycle-related kinase (EC 2.7.11.22) 29 3.1
3ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disinteg... 28 5.4
4ADA12_MOUSE (Q61824) ADAM 12 precursor (EC 3.4.24.-) (A disinteg... 28 5.4
5CCRK_RAT (Q4KM34) Cell cycle-related kinase (EC 2.7.11.22) 28 5.4
6CCRK_MOUSE (Q9JHU3) Cell cycle-related kinase (EC 2.7.11.22) (Cy... 28 5.4
7NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor) 28 7.0
8Y465_TREPA (O83478) Hypothetical protein TP0465 28 7.0
9ACADS_HUMAN (P16219) Short-chain specific acyl-CoA dehydrogenase... 27 9.1
10DLG7_HUMAN (Q15398) Discs large homolog 7 (Hepatoma up-regulated... 27 9.1
11MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.... 27 9.1
12MK15_RAT (Q9Z2A6) Mitogen-activated protein kinase 15 (EC 2.7.11... 27 9.1

>CCRK_HUMAN (Q8IZL9) Cell cycle-related kinase (EC 2.7.11.22)|
           (Cyclin-kinase-activating kinase p42) (CDK-activating
           kinase p42) (CAK-kinase p42)
          Length = 346

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC 237
           P G     HQ    WY  P   Y A     G   WS GC
Sbjct: 154 PDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWSVGC 192



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>CCRK_PONPY (Q5R7I7) Cell cycle-related kinase (EC 2.7.11.22)|
          Length = 346

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC 237
           P G     HQ    WY  P   Y A     G   W+ GC
Sbjct: 154 PDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGC 192



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>ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 12) (Meltrin alpha)
          Length = 909

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 129 CRNFWTKGIHVCNTPCTF*GLCDNRIN 49
           C+N    G+H C   C   G+C+NR N
Sbjct: 649 CQNISVFGVHECAMQCHGRGVCNNRKN 675



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>ADA12_MOUSE (Q61824) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 12) (Meltrin alpha)
          Length = 903

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 129 CRNFWTKGIHVCNTPCTF*GLCDNRIN 49
           C+N    G+H C   C   G+C+NR N
Sbjct: 647 CQNISVFGVHKCAMQCHGRGVCNNRKN 673



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>CCRK_RAT (Q4KM34) Cell cycle-related kinase (EC 2.7.11.22)|
          Length = 346

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC 237
           P G     HQ    WY  P   Y A     G   W+ GC
Sbjct: 154 PDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGC 192



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>CCRK_MOUSE (Q9JHU3) Cell cycle-related kinase (EC 2.7.11.22)|
           (Cyclin-kinase-activating kinase p42) (CDK-activating
           kinase p42) (CAK-kinase p42) (CDK-related protein kinase
           PNQLARE)
          Length = 346

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC 237
           P G     HQ    WY  P   Y A     G   W+ GC
Sbjct: 154 PDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGC 192



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>NPYR_DROME (P25931) Neuropeptide Y receptor (NPY-R) (PR4 receptor)|
          Length = 464

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 159 CAVSSFVALWCRNFWTKGIHVCN 91
           C  SSF++L+  N+W  G+ +C+
Sbjct: 158 CVPSSFISLFILNYWPFGLALCH 180



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>Y465_TREPA (O83478) Hypothetical protein TP0465|
          Length = 290

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -2

Query: 350 SGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GCKGQPAMLGQLSASIHLNLV 180
           +G    +  TL A Y  P+ +    S  +   RW+     QPA++G  +A  H +LV
Sbjct: 155 TGTYAQQRVTLGAGY--PAHEPFPFSFSVDAQRWTLSAPAQPALVGPFTAHTHTSLV 209



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>ACADS_HUMAN (P16219) Short-chain specific acyl-CoA dehydrogenase, mitochondrial|
           precursor (EC 1.3.99.2) (SCAD) (Butyryl-CoA
           dehydrogenase)
          Length = 412

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 6/30 (20%)
 Frame = +2

Query: 296 RAWRTMHTMF------DAHSLLVPRARDFS 367
           RAWR +HT++      + H +L+   RDF+
Sbjct: 20  RAWRQLHTIYQSVELPETHQMLLQTCRDFA 49



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>DLG7_HUMAN (Q15398) Discs large homolog 7 (Hepatoma up-regulated protein)|
           (HURP)
          Length = 846

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 98  TWIPFVQKLRHQRATNELTAQTCNRHTT 181
           TW P   ++   +AT E+ AQ C  ++T
Sbjct: 342 TWTPLKTEVDESQATKEILAQKCKTYST 369



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>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 7)
          Length = 549

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC------KGQPAMLG 213
           P GQA +E+     WY  P    ++     G   WS GC      +GQP   G
Sbjct: 170 PGGQALTEY-VATRWYRAPEVLLSSRWYTPGVDMWSLGCILGEMLRGQPLFPG 221



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>MK15_RAT (Q9Z2A6) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 7)
          Length = 547

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = -2

Query: 353 PSGQAKSEHQTLCAWYAMPSCKYTALSILLGTGRWS*GC------KGQPAMLG 213
           P GQA +E+     WY  P    ++     G   WS GC      +GQP   G
Sbjct: 170 PGGQALTEY-VATRWYRAPEVLLSSRWYTPGVDMWSLGCILGEMLRGQPLFPG 221


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,812,692
Number of Sequences: 219361
Number of extensions: 1113749
Number of successful extensions: 2354
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2354
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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