>PDE6_CAEEL (Q9N2V9) Probable 3',5'-cyclic phosphodiesterase pde-6 (EC|
           3.1.4.17)
          Length = 760

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -3

Query: 171 WRFWVLHSVAMRD*HAIGLIWLAFVTRRGWCFCVDCSDDKL 49
           W+F +LH   + D HA+  + +    R   C  + CSDD L
Sbjct: 444 WKFDILHLEKVSDHHALSQVGMKVFERWKVCDVLGCSDDLL 484

>MYCL2_HUMAN (P12525) L-myc-2 protein|
          Length = 357

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
 Frame = +2

Query: 221 EEVQAYPPTNSEDASSAQSSALAV-PQKQSHQRYESFLGLTRR--------SITDDVPPS 373
           EE+ + PP  SE A S Q   +    +  + ++Y S+L   RR        ++ D+V P+
Sbjct: 245 EEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRNDQRSRFLALRDEV-PA 303

Query: 374 LAH*PRLSKLL 406
           LA   R+SK++
Sbjct: 304 LASCSRVSKVM 314

>HAT2_USTMA (Q4P553) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 485

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 375 SHTDPALASCWNLHSSIMLFFAAAD 449
           SHTD  L+ CW+ H + +L  A+AD
Sbjct: 378 SHTDEILSVCWSPHHATVLASASAD 402

>DRP2_HUMAN (Q13474) Dystrophin-related protein 2|
          Length = 954

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +2

Query: 206 QKLRLEEVQAYPPTNSEDASSAQSSALAVPQKQ--SHQR 316
           Q  RL E+   PPT S+ + SA SS  + PQ+   SH R
Sbjct: 863 QLQRLRELLLQPPTESDGSGSAGSSLASSPQQSEGSHPR 901

>SYI_PYRFU (P46214) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1066

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 190 VASEPRLALLGSTFRGDARLTCDWI 116
           +  +P  A +G  F+GDARL   WI
Sbjct: 900 ITVKPNFAKVGPEFKGDARLVAKWI 924

>PIP_LACLA (P49022) Phage infection protein|
          Length = 901

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 182 TRYSNLWYQKLRLEEVQAYPPTNSEDASSAQSSALAV 292
           T+ S+ W Q + ++E Q YP  N+  AS+   +AL +
Sbjct: 673 TKESDFWTQPVEVQENQVYPIANNGSASTPFYTALCL 709

>GCS1_YEAST (P35197) ADP-ribosylation factor GTPase-activating protein GCS1|
          Length = 352

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 239 PPTNSEDASSAQSSALAVPQKQSHQRYESFLGLTRRSITDDVPPS 373
           P  N   A+ A SS  A  QK+ ++ Y + LG   +S  D +PPS
Sbjct: 162 PLENRRSATPANSSNGANFQKEKNEAYFAELGKKNQSRPDHLPPS 206

>YOPM_YERPE (P17778) Outer membrane protein yopM|
          Length = 409

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
 Frame = +2

Query: 83  HPLRVTNASQINPIAC*SRIATECRTQKRQPRLTRYSNLWYQKLRLEEVQAYPPTNSEDA 262
           +P  V+N     P+   S +       +     T Y N W +  R       PP N E  
Sbjct: 4   NPRNVSNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNA-----PPGNGEQR 58

Query: 263 SSAQSSALAVPQKQSHQRYESFLGLTRRSITDDVPP----------SLAH*PRLSKLLES 412
             A S       +Q+H+   + LGL   S   ++PP          SL   P L + L+S
Sbjct: 59  EMAVSRLRDCLDRQAHELELNNLGL---SSLPELPPHLESLVASCNSLTELPELPQSLKS 115

Query: 413 SFLDNAVLRS 442
             +DN  L++
Sbjct: 116 LLVDNNNLKA 125

>ATM_DEBHA (Q6BV76) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase TEL1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2948

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +3

Query: 117 IQSHVSRASPRNVEPKSASLGSLATLIFGTRSCGWRKCRHILPRIRKTPHPHNLQHWLF 293
           IQ+ VS+    N + KS  +  +      T    W K R I  R+ +   P +LQ WLF
Sbjct: 359 IQNLVSKLYSSNNQVKSEDINFMRK---PTDDKNWFKLRSIYLRVSEYDEPDSLQPWLF 414

>HEMA_MEASY (P28081) Hemagglutinin glycoprotein|
          Length = 620

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = -3

Query: 324 DSYLWCDCFCGTANAEDCADEASSEFVG-GYACT 226
           D  LWC  FC  AN+E       S  VG G +CT
Sbjct: 574 DQKLWCRHFCVLANSESGGHITHSGMVGMGVSCT 607


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,908,738
Number of Sequences: 219361
Number of extensions: 1454254
Number of successful extensions: 4158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4158
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)