>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +3

Query: 183 NQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSG 362
           +Q   +  P  QP+   P + A  HHH+ +  +SS+ V P+   S TS   + S    + 
Sbjct: 96  SQSPTSPHPSNQPAMLSPSTAASQHHHHHS-SSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154

Query: 363 THSG 374
            H+G
Sbjct: 155 EHNG 158

>CLUS_RAT (P05371) Clusterin precursor (Sulfated glycoprotein 2) (SGP-2)|
           (Dimeric acid glycoprotein) (DAG) (Testosterone
           repressed prostate message 2) (TRPM-2) [Contains:
           Clusterin beta chain; Clusterin alpha chain]
          Length = 447

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
 Frame = -1

Query: 375 IQNACLRAKHQKTWISQTS---RTLSSSV*HHARKHVMSGYDDA--SEPRYLAY-----E 226
           IQNA    KH KT I +T+   ++L +S+   A+K      DD   SE +  A+     E
Sbjct: 45  IQNAVQGVKHIKTLIEKTNAERKSLLNSL-EEAKKKKEGALDDTRDSEMKLKAFPEVCNE 103

Query: 225 LMVAIVGELLPFLGSSCSNSILFLC 151
            M+A+  E  P L  +C      +C
Sbjct: 104 TMMALWEECKPCLKHTCMKFYARVC 128

>L_EBOSM (Q66802) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2210

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 23   SAFMFPVPFDSRVPTSHQKQTDSTLHGSSS*QSGTMYAVWFSWQRNRI 166
            S +  P    S +P +H+ + +  L+ S+S  +   +  WFS Q+NRI
Sbjct: 1867 SGYTTPRMLLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRI 1914

>POL_HV2RO (P04584) Gag-Pol polyprotein (Pr160Gag-Pol) [Contains: Matrix|
           protein p17 (MA); Capsid protein p24 (CA); p2 spacer
           peptide; Nucleocapsid protein* (NC*); Transframe peptide
           (TF) (p6 pol); Protease (EC 3.4.23.47) (Retropepsin)
           (PR); Reverse trans
          Length = 1463

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 56  RVPTSHQKQTDSTLHGSSS*QSGTMYAVWFSWQRNRIELLQEEPR 190
           R P+S    T+ST  GSSS  +G +YA     +R   E +Q   R
Sbjct: 446 RGPSSAGADTNSTPSGSSSGSTGEIYAAREKTERAERETIQGSDR 490


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,681,035
Number of Sequences: 219361
Number of extensions: 1007466
Number of successful extensions: 2328
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)