>EGR1_MOUSE (P08046) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A)
          Length = 533

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
 Frame = +1

Query: 136 RSFDQADGRGGHRKVQLTNMKARQ----CGAPATSSPTTFHA-TACSYDACRPMLDLHTP 300
           R F ++D R  H K+ L     +       +PA SS +++ +  A SY +          
Sbjct: 401 RKFARSDERKRHTKIHLRQKDKKADKSVVASPAASSLSSYPSPVATSYPSPATTSFPSPV 460

Query: 301 PGRYAKPCCMTLENSAHSALRPSSSRIASSEMSCRFTSVVSSMSRAAL 444
           P  Y+ P   T  + AHS     S     + +   F + VSS   A +
Sbjct: 461 PTSYSSPGSSTYPSPAHSGFPSPSVATTFASVPPAFPTQVSSFPSAGV 508

>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 660

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 386 PARCPAGSPASSPACQGPRCCR 451
           P R  A  PAS P C GP C R
Sbjct: 365 PERADAKDPASLPQCLGPGCVR 386

>CXCC1_HUMAN (Q9P0U4) CpG-binding protein (PHD finger and CXXC domain-containing|
           protein 1) (CXXC finger protein 1)
          Length = 656

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 386 PARCPAGSPASSPACQGPRCCR 451
           P R  A  PAS P C GP C R
Sbjct: 361 PERADAKDPASLPQCLGPGCVR 382


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,433,400
Number of Sequences: 219361
Number of extensions: 1191129
Number of successful extensions: 3828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3823
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)