ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
2dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
3gb|AY111100.1| Zea mays CL2853_1 mRNA sequence 161 2e-36
4dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
5dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
6dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
7gb|AY110154.1| Zea mays CL11010_3 mRNA sequence 139 9e-30
8gb|AY105765.1| Zea mays PCO144112 mRNA sequence 131 2e-27
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
11emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial se... 117 3e-23
12emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327... 117 3e-23
13gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic seque... 107 3e-20
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
16dbj|AK058416.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
17ref|NM_188279.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
19dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
20dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
21gb|AE004946.1| Pseudomonas aeruginosa PAO1, section 507 of 529 o... 46 0.099
22gb|AY560320.1| Nicotiana sylvestris PHAVOLUTA-like HD-ZIPIII pro... 44 0.39
23gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus st... 42 1.5
24gb|AY554037.1| Oryza sativa (japonica cultivar-group) clone S103... 42 1.5
25gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomai... 42 1.5
26gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome... 42 1.5
27gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimy... 42 1.5
28emb|AL645626.10| Mouse DNA sequence from clone RP23-397J5 on chr... 42 1.5
29gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 geno... 42 1.5
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31gb|AF139210.1|AF139210 Oryza sativa HD-zipper protein mRNA, part... 42 1.5
32gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 gelda... 42 1.5
33dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
34dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
35dbj|AK061741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
37emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 m... 42 1.5
38dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.5
39gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.5
40ref|NM_119441.3| Arabidopsis thaliana ATHB-8 (HOMEOBOX GENE 8); ... 40 6.1
41ref|NM_102785.3| Arabidopsis thaliana PHV (PHAVOLUTA); DNA bindi... 40 6.1
42gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.1
43gb|AF213656.1| Panopea abrupta clone Pab2 microsatellite sequence 40 6.1
44gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 6.1
45gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.1
46ref|XM_870543.1| PREDICTED: Bos taurus similar to Rho guanine nu... 40 6.1
47gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome... 40 6.1
48gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island ... 40 6.1
49gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, comple... 40 6.1
50gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.1
51gb|BT008798.1| Arabidopsis thaliana At4g32880 gene, complete cds 40 6.1
52emb|Z50851.1|ATHB8GN A.thaliana athb-8 gene 40 6.1
53gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 40 6.1
54emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, ... 40 6.1
55emb|AJ441292.1|ATH441292 Arabidopsis thaliana mRNA for homeodoma... 40 6.1
56emb|AJ440967.1|ATH440967 Arabidopsis thaliana mRNA for homeodoma... 40 6.1
57emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 i... 40 6.1
58gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, comple... 40 6.1
59gb|AY099631.1| Arabidopsis thaliana HD-zip transcription factor ... 40 6.1
60dbj|AK221046.1| Arabidopsis thaliana mRNA for HD-Zip protein, pa... 40 6.1
61gb|AC163760.3| Pan troglodytes BAC clone CH251-180O13 from chrom... 40 6.1
62emb|BX818192.1|CNS0AEBW Arabidopsis thaliana Full-length cDNA Co... 40 6.1
63emb|BX816452.1|CNS0AD1U Arabidopsis thaliana Full-length cDNA Co... 40 6.1
64emb|BX815318.1|CNS0AATA Arabidopsis thaliana Full-length cDNA Co... 40 6.1
65gb|AC159651.1| Pan troglodytes BAC clone CH251-495E21 from chrom... 40 6.1
66gb|AC120337.4| Homo sapiens X BAC RP11-804N7 (Roswell Park Cance... 40 6.1
67dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.1
68emb|AJ330206.1|HSA330206 Homo sapiens genomic sequence surroundi... 40 6.1
69gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complet... 40 6.1
70emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chr... 40 6.1
71dbj|AB019377.1| Irpex lacteus cel3 gene for cellulase, complete cds 40 6.1 
>dbj|AK102183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M14, full
            insert sequence
          Length = 3140

 Score =  224 bits (113), Expect = 2e-55
 Identities = 191/217 (88%)
 Strand = Plus / Minus

                                                                        
Query: 238  accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 2776 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 2717

                                                                        
Query: 298  cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
            || || ||||| || | ||||||||||||||||| ||||| |||||| | ||||||||||
Sbjct: 2716 cctccagggagataggtgaaaccctgctgcatgatcttggggaactccgagcacagcgcc 2657

                                                                        
Query: 358  ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
            || || |||||||| |||||||||  ||| |||||||||||||| ||||| |||||||||
Sbjct: 2656 ttccggccctcgtcatccaggatcatctcgagcgagatgtcctggaggttgaccagcgtc 2597

                                                 
Query: 418  gtctccagcatgtcaagggccgcgttgttgccgaagg 454
            ||||| || ||||| ||| | || |||||| ||||||
Sbjct: 2596 gtctcaaggatgtcgaggccggcattgttggcgaagg 2560



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                             
Query: 168  tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
            ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 2840 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 2792
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>dbj|AK058915.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-A07, full
           insert sequence
          Length = 1011

 Score =  216 bits (109), Expect = 5e-53
 Identities = 190/217 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 698 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 639

                                                                       
Query: 298 cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
           || || ||||| || | ||||||||||||||||| ||||| |||||| | |||||||| |
Sbjct: 638 cctccagggagataggtgaaaccctgctgcatgatcttggggaactccgagcacagcgtc 579

                                                                       
Query: 358 ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
           || || |||||||| |||||||||  ||| |||||||||||||| ||||| |||||||||
Sbjct: 578 ttccggccctcgtcatccaggatcatctcgagcgagatgtcctggaggttgaccagcgtc 519

                                                
Query: 418 gtctccagcatgtcaagggccgcgttgttgccgaagg 454
           ||||| || ||||| ||| | || |||||| ||||||
Sbjct: 518 gtctcaaggatgtcgaggccggcattgttggcgaagg 482



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 168 tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
           ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 762 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 714
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>gb|AY111100.1| Zea mays CL2853_1 mRNA sequence
          Length = 1122

 Score =  161 bits (81), Expect = 2e-36
 Identities = 172/201 (85%), Gaps = 1/201 (0%)
 Strand = Plus / Plus

                                                                       
Query: 232 cccaccaccttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttg 291
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||
Sbjct: 366 cccaccaccttccacgccactgcctgctcgtacgacgcctgccgccccatgctcgacctg 425

                                                                       
Query: 292 cacacgcccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcac 351
           |||||||| |||||||||||||| |  ||||||||||||| |  || || ||  ||| ||
Sbjct: 426 cacacgccaccggggaggtacgccaggccctgctgcatgatcgcggggagctgcgcggac 485

                                                                       
Query: 352 agcgccttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgc-aggttcac 410
           || |||||  | ||||| ||||| |||| |||||||||||  | ||||||| | ||||||
Sbjct: 486 agggccttctggccctcctcgtcgaggaccgcctccagcggcaggtcctgcgatgttcac 545

                                
Query: 411 cagcgtcgtctccagcatgtc 431
           || |||||||||||| |||||
Sbjct: 546 catcgtcgtctccaggatgtc 566
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>dbj|AK103284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M18, full
            insert sequence
          Length = 3082

 Score =  147 bits (74), Expect = 4e-32
 Identities = 164/194 (84%)
 Strand = Plus / Minus

                                                                        
Query: 238  accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
            ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 2861 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 2802

                                                                        
Query: 298  cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
            || || |||||||| ||||||||||||||||||| ||||| |||||| |  || || |||
Sbjct: 2801 ccgcccgggaggtaggcgaaaccctgctgcatgatcttggggaactctgtacatagtgcc 2742

                                                                        
Query: 358  ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
            || || || || || || ||||||  ||| |||||||||||||| ||    | |||||||
Sbjct: 2741 ttccggccatcatcatcaaggatcttctcgagcgagatgtcctggagagcaatcagcgtc 2682

                          
Query: 418  gtctccagcatgtc 431
            ||||||||||||||
Sbjct: 2681 gtctccagcatgtc 2668



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 180  ccagttgacgaacatgaaggcaaggcagtgcggcg 214
            ||||||||||||||||||||| |||||||||||||
Sbjct: 2913 ccagttgacgaacatgaaggcgaggcagtgcggcg 2879
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>dbj|AK101425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038E17, full
           insert sequence
          Length = 1165

 Score =  147 bits (74), Expect = 4e-32
 Identities = 164/194 (84%)
 Strand = Plus / Minus

                                                                       
Query: 238 accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
           ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 962 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 903

                                                                       
Query: 298 cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
           || || |||||||| ||||||||||||||||||| ||||| |||||| |  || || |||
Sbjct: 902 ccgcccgggaggtaggcgaaaccctgctgcatgatcttggggaactctgtacatagtgcc 843

                                                                       
Query: 358 ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
           || || || || || || ||||||  ||| |||||||||||||| ||    | |||||||
Sbjct: 842 ttccggccatcatcatcaaggatcttctcgagcgagatgtcctggagagcaatcagcgtc 783

                         
Query: 418 gtctccagcatgtc 431
           ||||||||||||||
Sbjct: 782 gtctccagcatgtc 769



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 180  ccagttgacgaacatgaaggcaaggcagtgcggcg 214
            ||||||||||||||||||||| |||||||||||||
Sbjct: 1014 ccagttgacgaacatgaaggcgaggcagtgcggcg 980
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>dbj|AK060584.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H08, full
            insert sequence
          Length = 1875

 Score =  147 bits (74), Expect = 4e-32
 Identities = 164/194 (84%)
 Strand = Plus / Minus

                                                                        
Query: 238  accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
            ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 1647 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 1588

                                                                        
Query: 298  cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
            || || |||||||| ||||||||||||||||||| ||||| |||||| |  || || |||
Sbjct: 1587 ccgcccgggaggtaggcgaaaccctgctgcatgatcttggggaactctgtacatagtgcc 1528

                                                                        
Query: 358  ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
            || || || || || || ||||||  ||| |||||||||||||| ||    | |||||||
Sbjct: 1527 ttccggccatcatcatcaaggatcttctcgagcgagatgtcctggagagcaatcagcgtc 1468

                          
Query: 418  gtctccagcatgtc 431
            ||||||||||||||
Sbjct: 1467 gtctccagcatgtc 1454



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 180  ccagttgacgaacatgaaggcaaggcagtgcggcg 214
            ||||||||||||||||||||| |||||||||||||
Sbjct: 1699 ccagttgacgaacatgaaggcgaggcagtgcggcg 1665
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>gb|AY110154.1| Zea mays CL11010_3 mRNA sequence
          Length = 627

 Score =  139 bits (70), Expect = 9e-30
 Identities = 163/194 (84%)
 Strand = Plus / Plus

                                                                       
Query: 238 accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
           ||||||||||||||||||||||| |||||| || |||||||||||||||||   ||||||
Sbjct: 301 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacacacacg 360

                                                                       
Query: 298 cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
           || ||||||||||||||||| ||||| ||||| | ||| | | |||||| ||| ||||||
Sbjct: 361 ccaccggggaggtacgcgaagccctgttgcataatcttagggtactcggtgcagagcgcc 420

                                                                       
Query: 358 ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
           || |  || |||||||| ||||||  ||| || ||||||||||| ||    | |||||||
Sbjct: 421 ttcctgccatcgtcgtcaaggatcttctcaagggagatgtcctggagagcaatcagcgtc 480

                         
Query: 418 gtctccagcatgtc 431
           ||||||||||||||
Sbjct: 481 gtctccagcatgtc 494



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 168 tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcgg 212
           ||||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 237 tcacacgaaggaccagttcacgaacatgaaggcaaggcagtgcgg 281
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>gb|AY105765.1| Zea mays PCO144112 mRNA sequence
          Length = 1851

 Score =  131 bits (66), Expect = 2e-27
 Identities = 162/194 (83%)
 Strand = Plus / Minus

                                                                        
Query: 238  accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
            |||||||||||||| |||||||| |||||| || |||||||||||||||||  |||||| 
Sbjct: 1581 accttccacgccacggcctgctcgtacgacaccggccgccccatgctcgacacgcacaca 1522

                                                                        
Query: 298  cccccggggaggtacgcgaaaccctgctgcatgaccttggagaactcggcgcacagcgcc 357
            || ||||||||||||||||||||||||||||| | ||| | | |||||| ||| ||||||
Sbjct: 1521 ccgccggggaggtacgcgaaaccctgctgcatcaacttagggtactcggtgcagagcgcc 1462

                                                                        
Query: 358  ttgcgcccctcgtcgtccaggatcgcctccagcgagatgtcctgcaggttcaccagcgtc 417
            ||    || |||||||| ||||||  ||| || ||||||||||| ||    | |||||||
Sbjct: 1461 ttcttgccatcgtcgtcaaggatcttctcgagggagatgtcctggagagcgatcagcgtc 1402

                          
Query: 418  gtctccagcatgtc 431
            ||||| ||||||||
Sbjct: 1401 gtctcgagcatgtc 1388



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 168  tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcg 214
            ||||| ||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 1645 tcacacgaaggaccagttgacgaacatgaaggcgaggcagtgcggcg 1599
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  117 bits (59), Expect = 3e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                            
Query: 320      cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
                |||||||||||| ||||| |||||| | |||||||||||| || |||||||| |||||||
Sbjct: 25954768 cctgctgcatgatcttggggaactccgagcacagcgccttccggccctcgtcatccagga 25954827

                                                                            
Query: 380      tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtcaagggccg 439
                ||  ||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| | |
Sbjct: 25954828 tcatctcgagcgagatgtcctggaggttgaccagcgtcgtctcaaggatgtcgaggccgg 25954887

                               
Query: 440      cgttgttgccgaagg 454
                | |||||| ||||||
Sbjct: 25954888 cattgttggcgaagg 25954902



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                            
Query: 238      accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
                ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 25954570 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 25954629

                                          
Query: 298      cccccggggaggtacgcgaaaccctg 323
                || || ||||| || | |||||||||
Sbjct: 25954630 cctccagggagataggtgaaaccctg 25954655



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 168      tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
                ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 25954506 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 25954554
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  117 bits (59), Expect = 3e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                            
Query: 320      cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
                |||||||||||| ||||| |||||| | |||||||||||| || |||||||| |||||||
Sbjct: 25882946 cctgctgcatgatcttggggaactccgagcacagcgccttccggccctcgtcatccagga 25883005

                                                                            
Query: 380      tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtcaagggccg 439
                ||  ||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| | |
Sbjct: 25883006 tcatctcgagcgagatgtcctggaggttgaccagcgtcgtctcaaggatgtcgaggccgg 25883065

                               
Query: 440      cgttgttgccgaagg 454
                | |||||| ||||||
Sbjct: 25883066 cattgttggcgaagg 25883080



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Plus

                                                                            
Query: 238      accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
                ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 25882748 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 25882807

                                          
Query: 298      cccccggggaggtacgcgaaaccctg 323
                || || ||||| || | |||||||||
Sbjct: 25882808 cctccagggagataggtgaaaccctg 25882833



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 168      tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
                ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 25882684 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 25882732
to top
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
             library Monsanto from chromosome 12 of cultivar Nipponbare
             of ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 61296

 Score =  117 bits (59), Expect = 3e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                         
Query: 320   cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
             |||||||||||| ||||| |||||| | |||||||||||| || |||||||| |||||||
Sbjct: 20521 cctgctgcatgatcttggggaactccgagcacagcgccttccggccctcgtcatccagga 20462

                                                                         
Query: 380   tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtcaagggccg 439
             ||  ||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| | |
Sbjct: 20461 tcatctcgagcgagatgtcctggaggttgaccagcgtcgtctcaaggatgtcgaggccgg 20402

                            
Query: 440   cgttgttgccgaagg 454
             | |||||| ||||||
Sbjct: 20401 cattgttggcgaagg 20387



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                         
Query: 238   accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
             ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 20719 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 20660

                                       
Query: 298   cccccggggaggtacgcgaaaccctg 323
             || || ||||| || | |||||||||
Sbjct: 20659 cctccagggagataggtgaaaccctg 20634



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                              
Query: 168   tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
             ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 20783 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 20735
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>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 161806

 Score =  117 bits (59), Expect = 3e-23
 Identities = 116/135 (85%)
 Strand = Plus / Minus

                                                                          
Query: 320    cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
              |||||||||||| ||||| |||||| | |||||||||||| || |||||||| |||||||
Sbjct: 156901 cctgctgcatgatcttggggaactccgagcacagcgccttccggccctcgtcatccagga 156842

                                                                          
Query: 380    tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtcaagggccg 439
              ||  ||| |||||||||||||| ||||| |||||||||||||| || ||||| ||| | |
Sbjct: 156841 tcatctcgagcgagatgtcctggaggttgaccagcgtcgtctcaaggatgtcgaggccgg 156782

                             
Query: 440    cgttgttgccgaagg 454
              | |||||| ||||||
Sbjct: 156781 cattgttggcgaagg 156767



 Score =  115 bits (58), Expect = 1e-22
 Identities = 79/86 (91%)
 Strand = Plus / Minus

                                                                          
Query: 238    accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
              ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 157099 accttccacgccaccgcctgctcatacgatgcctgccgccccatgctcgacttgcagacg 157040

                                        
Query: 298    cccccggggaggtacgcgaaaccctg 323
              || || ||||| || | |||||||||
Sbjct: 157039 cctccagggagataggtgaaaccctg 157014



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                               
Query: 168    tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
              ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 157163 tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 157115
to top
>gb|AC147427.2| Oryza sativa chromosome 3  B1394A07 genomic sequence, complete sequence
          Length = 175704

 Score =  107 bits (54), Expect = 3e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                         
Query: 238   accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
             ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 96342 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 96283

                                       
Query: 298   cccccggggaggtacgcgaaaccctg 323
             || || |||||||| |||||||||||
Sbjct: 96282 ccgcccgggaggtaggcgaaaccctg 96257



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 180   ccagttgacgaacatgaaggcaaggcagtgcggcg 214
             ||||||||||||||||||||| |||||||||||||
Sbjct: 96394 ccagttgacgaacatgaaggcgaggcagtgcggcg 96360



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Minus

                                                                         
Query: 320   cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
             |||||||||||| ||||| |||||| |  || || ||||| || || || || || ||||
Sbjct: 96169 cctgctgcatgatcttggggaactctgtacatagtgccttccggccatcatcatcaagga 96110

                                                                 
Query: 380   tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtc 431
             ||  ||| |||||||||||||| ||    | |||||||||||||||||||||
Sbjct: 96109 tcttctcgagcgagatgtcctggagagcaatcagcgtcgtctccagcatgtc 96058
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 238      accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
                ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 24539518 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 24539577

                                          
Query: 298      cccccggggaggtacgcgaaaccctg 323
                || || |||||||| |||||||||||
Sbjct: 24539578 ccgcccgggaggtaggcgaaaccctg 24539603



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 180      ccagttgacgaacatgaaggcaaggcagtgcggcg 214
                ||||||||||||||||||||| |||||||||||||
Sbjct: 24539466 ccagttgacgaacatgaaggcgaggcagtgcggcg 24539500



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                            
Query: 320      cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
                |||||||||||| ||||| |||||| |  || || ||||| || || || || || ||||
Sbjct: 24539691 cctgctgcatgatcttggggaactctgtacatagtgccttccggccatcatcatcaagga 24539750

                                                                    
Query: 380      tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtc 431
                ||  ||| |||||||||||||| ||    | |||||||||||||||||||||
Sbjct: 24539751 tcttctcgagcgagatgtcctggagagcaatcagcgtcgtctccagcatgtc 24539802
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 238      accttccacgccaccgcctgctcatacgacgcctgccgccccatgctcgacttgcacacg 297
                ||||||||||||||||||||||| |||||| || |||||||||||||||||  |||||||
Sbjct: 24456987 accttccacgccaccgcctgctcgtacgacaccggccgccccatgctcgacacgcacacg 24457046

                                          
Query: 298      cccccggggaggtacgcgaaaccctg 323
                || || |||||||| |||||||||||
Sbjct: 24457047 ccgcccgggaggtaggcgaaaccctg 24457072



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                                   
Query: 180      ccagttgacgaacatgaaggcaaggcagtgcggcg 214
                ||||||||||||||||||||| |||||||||||||
Sbjct: 24456935 ccagttgacgaacatgaaggcgaggcagtgcggcg 24456969



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                            
Query: 320      cctgctgcatgaccttggagaactcggcgcacagcgccttgcgcccctcgtcgtccagga 379
                |||||||||||| ||||| |||||| |  || || ||||| || || || || || ||||
Sbjct: 24457160 cctgctgcatgatcttggggaactctgtacatagtgccttccggccatcatcatcaagga 24457219

                                                                    
Query: 380      tcgcctccagcgagatgtcctgcaggttcaccagcgtcgtctccagcatgtc 431
                ||  ||| |||||||||||||| ||    | |||||||||||||||||||||
Sbjct: 24457220 tcttctcgagcgagatgtcctggagagcaatcagcgtcgtctccagcatgtc 24457271
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>dbj|AK058416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D03, full
           insert sequence
          Length = 375

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Minus

                                                            
Query: 168 tcacaggaaggtccagttgacgaacatgaaggcaaggcagtgcggcgcg 216
           ||||| ||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 94  tcacatgaaggtccagttgacgagcatgaaggcgaggcagtgcggcgcg 46



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 238 accttccacgccaccgcctgctcatacga 266
           |||||||||||||||||||||||||||||
Sbjct: 30  accttccacgccaccgcctgctcatacga 2
to top
>ref|NM_188279.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2697

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 235  accaccttccacgccaccgcctgctcatacgacgcc 270
            |||||||||||||||||||||| ||| |||||||||
Sbjct: 2633 accaccttccacgccaccgccttctcgtacgacgcc 2598



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 172  aggaaggtccagttgacgaacatgaag 198
            |||||||||||||||| ||||||||||
Sbjct: 2693 aggaaggtccagttgatgaacatgaag 2667
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                   
Query: 235     accaccttccacgccaccgcctgctcatacgacgcc 270
               |||||||||||||||||||||| ||| |||||||||
Sbjct: 5425777 accaccttccacgccaccgccttctcgtacgacgcc 5425812



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 172     aggaaggtccagttgacgaacatgaag 198
               |||||||||||||||| ||||||||||
Sbjct: 5425717 aggaaggtccagttgatgaacatgaag 5425743
to top
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1015E06
          Length = 164583

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 235   accaccttccacgccaccgcctgctcatacgacgcc 270
             |||||||||||||||||||||| ||| |||||||||
Sbjct: 22617 accaccttccacgccaccgccttctcgtacgacgcc 22652



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 172   aggaaggtccagttgacgaacatgaag 198
             |||||||||||||||| ||||||||||
Sbjct: 22557 aggaaggtccagttgatgaacatgaag 22583
to top
>dbj|AK112091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-A01, full
            insert sequence
          Length = 1429

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 235  accaccttccacgccaccgcctgctcatacgacgcc 270
            |||||||||||||||||||||| ||| |||||||||
Sbjct: 1234 accaccttccacgccaccgccttctcgtacgacgcc 1199



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 172  aggaaggtccagttgacgaacatgaag 198
            |||||||||||||||| ||||||||||
Sbjct: 1294 aggaaggtccagttgatgaacatgaag 1268
to top
>gb|AE004946.1| Pseudomonas aeruginosa PAO1, section 507 of 529 of the complete
            genome
          Length = 13075

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 341  actcggcgcacagcgccttgcgc 363
            |||||||||||||||||||||||
Sbjct: 7948 actcggcgcacagcgccttgcgc 7926
to top
>gb|AY560320.1| Nicotiana sylvestris PHAVOLUTA-like HD-ZIPIII protein mRNA, complete
            cds
          Length = 3066

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 319  ccctgctgcatgaccttggagaactc 344
            ||||||||||||| ||||||||||||
Sbjct: 2741 ccctgctgcatgatcttggagaactc 2716
to top
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427
             geldanamycin biosynthesis gene cluster, partial sequence
          Length = 75920

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cgcccgccacgtcatcacccaccac 239
             |||||||||| ||||||||||||||
Sbjct: 39915 cgcccgccacctcatcacccaccac 39939



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   cgcccgccacgtcatcacccacca 238
             |||||||||| |||||||||||||
Sbjct: 56450 cgcccgccacctcatcacccacca 56473
to top
>gb|AY554037.1| Oryza sativa (japonica cultivar-group) clone S10307 Hox9 (hox9)
           mRNA, partial cds
          Length = 562

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 166 ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
           ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 203 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 159
to top
>gb|AY423716.1| Oryza sativa (japonica cultivar-group) homeodomain leucine-zipper
            protein Hox9 mRNA, complete cds
          Length = 3174

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 166  ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
            ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 2806 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 2762
to top
>gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC
             Library) complete sequence
          Length = 147124

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    ggcaacaaacatgcaaaccat 70
             |||||||||||||||||||||
Sbjct: 53305 ggcaacaaacatgcaaaccat 53325



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 81    ataggatggttacatagatagataa 105
             ||||||||| |||||||||||||||
Sbjct: 18611 ataggatggatacatagatagataa 18635
to top
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide
             biosynthetic gene cluster, complete sequence
          Length = 86941

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cgcccgccacgtcatcacccaccac 239
             |||||||||| ||||||||||||||
Sbjct: 69072 cgcccgccacctcatcacccaccac 69096
to top
>emb|AL645626.10| Mouse DNA sequence from clone RP23-397J5 on chromosome 11 Contains part
             of the Accn1 gene for neuronal amiloride-sensitive cation
             channel 1 (degenerin), a CpG island and a novel gene,
             complete sequence
          Length = 170821

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    ggatggttacatagatagata 104
             |||||||||||||||||||||
Sbjct: 42858 ggatggttacatagatagata 42838
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>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete
             sequence
          Length = 178692

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 166   ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
             ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 97449 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 97493
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 166      ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
                ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 17577182 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 17577138
to top
>gb|AF139210.1|AF139210 Oryza sativa HD-zipper protein mRNA, partial cds
          Length = 701

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 411 cagcgtcgtctccagcatgtc 431
           |||||||||||||||||||||
Sbjct: 638 cagcgtcgtctccagcatgtc 618
to top
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis
             gene cluster, partial sequence
          Length = 69644

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cgcccgccacgtcatcacccaccac 239
             |||||||||| ||||||||||||||
Sbjct: 32134 cgcccgccacctcatcacccaccac 32158



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 215   cgcccgccacgtcatcacccaccac 239
             ||||||||||||| |||||||||||
Sbjct: 15640 cgcccgccacgtcgtcacccaccac 15664



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   cgcccgccacgtcatcacccacca 238
             |||||||||| |||||||||||||
Sbjct: 48702 cgcccgccacctcatcacccacca 48725
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>dbj|AK102830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G06, full
            insert sequence
          Length = 3000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 166  ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
            ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 2653 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 2609
to top
>dbj|AK102603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098N12, full
            insert sequence
          Length = 3227

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 166  ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
            ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 2877 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 2833
to top
>dbj|AK061741.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E12, full
            insert sequence
          Length = 1481

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 166  ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
            ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 1215 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 1171
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 166      ggtcacaggaaggtccagttgacgaacatgaaggcaaggcagtgc 210
                ||||||| ||||| ||||||||||||   |||||| |||||||||
Sbjct: 17586222 ggtcacacgaaggaccagttgacgaagcagaaggcgaggcagtgc 17586178
to top
>emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 map Xq28, complete
              sequence
          Length = 167178

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     ggcaacaaacatgcaaaccat 70
              |||||||||||||||||||||
Sbjct: 102344 ggcaacaaacatgcaaaccat 102324
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>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040,
             complete sequence
          Length = 92281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   gaacatgaaggcaaggcagtg 209
             |||||||||||||||||||||
Sbjct: 20103 gaacatgaaggcaaggcagtg 20083
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    cggcgcgcccgccacgtcatc 230
              |||||||||||||||||||||
Sbjct: 492082 cggcgcgcccgccacgtcatc 492102
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>ref|NM_119441.3| Arabidopsis thaliana ATHB-8 (HOMEOBOX GENE 8); DNA binding /
            transcription factor AT4G32880 (ATHB-8) mRNA, complete
            cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  caccagcgtcgtctccagcatgtc 431
            ||||| ||||||||||||||||||
Sbjct: 2651 caccaacgtcgtctccagcatgtc 2628
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>ref|NM_102785.3| Arabidopsis thaliana PHV (PHAVOLUTA); DNA binding / transcription
            factor AT1G30490 (PHV) mRNA, complete cds
          Length = 2878

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 319  ccctgctgcatgaccttggagaactcgg 346
            ||||||||||||| ||||| ||||||||
Sbjct: 2540 ccctgctgcatgatcttggcgaactcgg 2513
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 420    ctccagcatgtcaagggccgcgtt 443
              |||||||||| |||||||||||||
Sbjct: 789902 ctccagcatgacaagggccgcgtt 789925
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>gb|AF213656.1| Panopea abrupta clone Pab2 microsatellite sequence
          Length = 198

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  atagatagataactgaaccataca 117
           ||||||||||||||||| ||||||
Sbjct: 158 atagatagataactgaaacataca 181
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 361     cgcccctcgtcgtccaggat 380
               ||||||||||||||||||||
Sbjct: 2154149 cgcccctcgtcgtccaggat 2154168
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 244     cacgccaccgcctgctcata 263
               ||||||||||||||||||||
Sbjct: 3720476 cacgccaccgcctgctcata 3720495
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>ref|XM_870543.1| PREDICTED: Bos taurus similar to Rho guanine nucleotide exchange
            factor (GEF) 17 (LOC540026), partial mRNA
          Length = 3192

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  gcccctcgtcgtccaggatc 381
            ||||||||||||||||||||
Sbjct: 1749 gcccctcgtcgtccaggatc 1768
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>gb|AC142145.3| Mus musculus BAC clone RP24-69D13 from chromosome 8, complete sequence
          Length = 169014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     gatggttacatagatagata 104
              ||||||||||||||||||||
Sbjct: 151889 gatggttacatagatagata 151870
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>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete
             sequence
          Length = 111332

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   ccaggatcgcctccagcgag 393
             ||||||||||||||||||||
Sbjct: 52724 ccaggatcgcctccagcgag 52743
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>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence
          Length = 205957

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 77     atagataggatggttacatagatagata 104
              ||||||||||||| || |||||||||||
Sbjct: 102774 atagataggatggataaatagatagata 102747
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    actcggcgcacagcgccttg 360
              ||||||||||||||||||||
Sbjct: 683518 actcggcgcacagcgccttg 683499
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>gb|BT008798.1| Arabidopsis thaliana At4g32880 gene, complete cds
          Length = 2502

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  caccagcgtcgtctccagcatgtc 431
            ||||| ||||||||||||||||||
Sbjct: 2265 caccaacgtcgtctccagcatgtc 2242
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>emb|Z50851.1|ATHB8GN A.thaliana athb-8 gene
          Length = 5286

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  caccagcgtcgtctccagcatgtc 431
            ||||| ||||||||||||||||||
Sbjct: 4790 caccaacgtcgtctccagcatgtc 4767
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 77     atagataggatggttacatagatagata 104
              ||||||||||||| || |||||||||||
Sbjct: 182984 atagataggatggatagatagatagata 182957



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 77     atagataggatggttacatagatagata 104
              ||||||||||||| || |||||||||||
Sbjct: 182667 atagataggatggatagatagatagata 182640
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>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78
          Length = 198669

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   caccagcgtcgtctccagcatgtc 431
             ||||| ||||||||||||||||||
Sbjct: 85694 caccaacgtcgtctccagcatgtc 85717
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>emb|AJ441292.1|ATH441292 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein 8
            (hb-8 gene)
          Length = 2502

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  caccagcgtcgtctccagcatgtc 431
            ||||| ||||||||||||||||||
Sbjct: 2265 caccaacgtcgtctccagcatgtc 2242
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>emb|AJ440967.1|ATH440967 Arabidopsis thaliana mRNA for homeodomain-leucine zipper protein (hb9
            gene)
          Length = 2526

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 319  ccctgctgcatgaccttggagaactcgg 346
            ||||||||||||| ||||| ||||||||
Sbjct: 2381 ccctgctgcatgatcttggcgaactcgg 2354
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>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3,
            complete sequence
          Length = 197042

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 405  gttcaccagcgtcgtctccagcatgtca 432
            ||||||||| ||| ||||||||||||||
Sbjct: 6022 gttcaccagtgtcttctccagcatgtca 6049
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>gb|AC113617.5| Homo sapiens BAC clone RP11-610B19 from 4, complete sequence
          Length = 152306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   agcgagatgtcctgcaggttcacc 411
             |||| |||||||||||||||||||
Sbjct: 18587 agcgtgatgtcctgcaggttcacc 18610
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>gb|AY099631.1| Arabidopsis thaliana HD-zip transcription factor (athb-8) (At4g32880)
            mRNA, complete cds
          Length = 3004

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 408  caccagcgtcgtctccagcatgtc 431
            ||||| ||||||||||||||||||
Sbjct: 2651 caccaacgtcgtctccagcatgtc 2628
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>dbj|AK221046.1| Arabidopsis thaliana mRNA for HD-Zip protein, partial cds, clone:
           RAFL22-75-F10
          Length = 589

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 ccctgctgcatgaccttggagaactcgg 346
           ||||||||||||| ||||| ||||||||
Sbjct: 255 ccctgctgcatgatcttggcgaactcgg 228
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>gb|AC163760.3| Pan troglodytes BAC clone CH251-180O13 from chromosome unknown,
            complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 388  agcgagatgtcctgcaggttcacc 411
            |||| |||||||||||||||||||
Sbjct: 3607 agcgtgatgtcctgcaggttcacc 3584
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>emb|BX818192.1|CNS0AEBW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL65ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 824

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 ccctgctgcatgaccttggagaactcgg 346
           ||||||||||||| ||||| ||||||||
Sbjct: 533 ccctgctgcatgatcttggcgaactcgg 506
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>emb|BX816452.1|CNS0AD1U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH49ZH04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1088

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 319 ccctgctgcatgaccttggagaactcgg 346
           ||||||||||||| ||||| ||||||||
Sbjct: 943 ccctgctgcatgatcttggcgaactcgg 916
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>emb|BX815318.1|CNS0AATA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS51ZC10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2956

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 319  ccctgctgcatgaccttggagaactcgg 346
            ||||||||||||| ||||| ||||||||
Sbjct: 2681 ccctgctgcatgatcttggcgaactcgg 2654
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>gb|AC159651.1| Pan troglodytes BAC clone CH251-495E21 from chromosome unknown, complete
              sequence
          Length = 154233

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 388    agcgagatgtcctgcaggttcacc 411
              |||| |||||||||||||||||||
Sbjct: 124269 agcgtgatgtcctgcaggttcacc 124246
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>gb|AC120337.4| Homo sapiens X BAC RP11-804N7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aacaaacatgcaaaccatag 72
             ||||||||||||||||||||
Sbjct: 65842 aacaaacatgcaaaccatag 65823
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 371     cgtccaggatcgcctccagcgaga 394
               |||||||||||||| |||||||||
Sbjct: 2077492 cgtccaggatcgccaccagcgaga 2077469
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>emb|AJ330206.1|HSA330206 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJP1-P20RS
          Length = 750

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 gccaccgcctgctcatacga 266
           ||||||||||||||||||||
Sbjct: 201 gccaccgcctgctcatacga 220
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>gb|AC133655.4| Mus musculus BAC clone RP24-364H7 from 8, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gatggttacatagatagata 104
             ||||||||||||||||||||
Sbjct: 67644 gatggttacatagatagata 67625
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>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
             sequence
          Length = 221374

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    atagataggatggttacatagatagata 104
             ||||||||||||| || |||||||||||
Sbjct: 57989 atagataggatggatagatagatagata 58016



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    atagataggatggttacatagatagata 104
             ||||||||||||| || |||||||||||
Sbjct: 57807 atagataggatggatagatagatagata 57834



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    atagataggatggttacatagatagata 104
             ||||||||||||| || |||||||||||
Sbjct: 57750 atagataggatggatagatagatagata 57777



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    atagataggatggttacatagatagata 104
             ||||||||||||| || |||||||||||
Sbjct: 57689 atagataggatggatagatagatagata 57716
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>dbj|AB019377.1| Irpex lacteus cel3 gene for cellulase, complete cds
          Length = 2630

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 147  tcaagcagatgggcgaggcggtca 170
            ||||||||||||||||||| ||||
Sbjct: 1724 tcaagcagatgggcgaggctgtca 1747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,058,640
Number of Sequences: 3902068
Number of extensions: 4058640
Number of successful extensions: 62599
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 61983
Number of HSP's gapped (non-prelim): 603
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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