Clone Name | rbastl43c08 |
---|---|
Clone Library Name | barley_pub |
>DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-)| Length = 1097 Score = 100 bits (250), Expect = 1e-21 Identities = 44/64 (68%), Positives = 51/64 (79%) Frame = -1 Query: 459 DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKRRTI 280 DL +F K LE +FVR++TVHLNGKPRVLTLKQDLHYWPTWEL F+PET W+R + Sbjct: 1034 DLNAFADATKELEHGQFVRIRTVHLNGKPRVLTLKQDLHYWPTWELRFDPETALWRRNIL 1093 Query: 279 KALQ 268 KALQ Sbjct: 1094 KALQ 1097
>YIFC_SCHPO (Q9P7S1) Hypothetical protein C23G3.12c in chromosome I| Length = 996 Score = 43.5 bits (101), Expect = 3e-04 Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = -1 Query: 459 DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDT-WK 292 +LE F++ ++ ++D +VRV T + P VLT+K + HY+PT +L + + + W+ Sbjct: 905 NLEDFVREIRKIDDNSYVRVSTSTFDKVPVVLTIKMNKHYFPTIDLVQDAKAENGWR 961
>YNM3_YEAST (P53920) Hypothetical 110.9 kDa protein in SPC98-TOM70 intergenic| region Length = 997 Score = 43.1 bits (100), Expect = 3e-04 Identities = 18/55 (32%), Positives = 34/55 (61%) Frame = -1 Query: 459 DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTW 295 DL++F++VVK + D + +++ + + P ++LK + HY+PT EL + T W Sbjct: 930 DLDTFLKVVKTIPDNSYCKMRLMTFDNVPFAISLKTNYHYFPTAELKRDNITHKW 984 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = -1 Query: 459 DLESFIQVVKGLEDREFVRVKTVHLNGK--PRVLTLKQDLHYWPTWEL-TFEPETDTWKR 289 DL++FI+++K + DR+ V V+ HL + P V ++ D H+ + + T T W Sbjct: 455 DLDTFIEIMKTIPDRKRVTVRYHHLTDQHSPLVTSIYIDRHWCNEFRVYTRNDTTGIWDY 514 Query: 288 RTI 280 + + Sbjct: 515 KNV 517
>CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 401 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +2 Query: 80 QLSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLG 205 +L G+EI +S++E H L+P LAHR H V L G Sbjct: 106 RLEAGDEIAISALEHHANLLPWQQLAHRRNLHLVVLPLDAHG 147
>PGK_NITEU (Q82XE8) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 392 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/64 (31%), Positives = 28/64 (43%) Frame = +1 Query: 241 RQNKSSHGWLQRFYCSPLPCVGLRFKSELPGRPIVKVLFQSEHPWFPVQMDGLHPNKLTV 420 R S+HG + +P+ C G+ EL + K L Q HP + KLTV Sbjct: 147 RAEASTHGIAKY---APIACAGILLTEELDA--LTKALHQPAHPLVAIVGGSKVSTKLTV 201 Query: 421 FQSL 432 +SL Sbjct: 202 LESL 205
>BUR1_GIBZE (Q4I5U9) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 473 Score = 28.9 bits (63), Expect = 6.6 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = +1 Query: 364 EHPWFPVQMDGLHPNKLTVFQSLHHLNK 447 +HPWF +Q L P+++ ++ H L++ Sbjct: 335 QHPWFKMQPLPLEPHEIPTYEESHELDR 362
>METX_YEAST (Q04533) Putative cystathionine gamma-synthase YML082W (EC| 2.5.1.48) (O-succinylhomoserine (thiol)-lyase) Length = 649 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = -1 Query: 417 REFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKR 289 RE+VR K H NGK R+L L E TWKR Sbjct: 90 REYVRRKCAHRNGKVRILQL--------ATAKPINEEQKTWKR 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,527,688 Number of Sequences: 219361 Number of extensions: 1372136 Number of successful extensions: 3421 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3421 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)