ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-) 100 1e-21
2YIFC_SCHPO (Q9P7S1) Hypothetical protein C23G3.12c in chromosome I 44 3e-04
3YNM3_YEAST (P53920) Hypothetical 110.9 kDa protein in SPC98-TOM7... 43 3e-04
4CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7) 31 1.3
5PGK_NITEU (Q82XE8) Phosphoglycerate kinase (EC 2.7.2.3) 29 5.0
6BUR1_GIBZE (Q4I5U9) Serine/threonine-protein kinase BUR1 (EC 2.7... 29 6.6
7METX_YEAST (Q04533) Putative cystathionine gamma-synthase YML082... 28 8.6

>DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-)|
          Length = 1097

 Score =  100 bits (250), Expect = 1e-21
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = -1

Query: 459  DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKRRTI 280
            DL +F    K LE  +FVR++TVHLNGKPRVLTLKQDLHYWPTWEL F+PET  W+R  +
Sbjct: 1034 DLNAFADATKELEHGQFVRIRTVHLNGKPRVLTLKQDLHYWPTWELRFDPETALWRRNIL 1093

Query: 279  KALQ 268
            KALQ
Sbjct: 1094 KALQ 1097



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>YIFC_SCHPO (Q9P7S1) Hypothetical protein C23G3.12c in chromosome I|
          Length = 996

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -1

Query: 459  DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDT-WK 292
            +LE F++ ++ ++D  +VRV T   +  P VLT+K + HY+PT +L  + + +  W+
Sbjct: 905  NLEDFVREIRKIDDNSYVRVSTSTFDKVPVVLTIKMNKHYFPTIDLVQDAKAENGWR 961



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>YNM3_YEAST (P53920) Hypothetical 110.9 kDa protein in SPC98-TOM70 intergenic|
            region
          Length = 997

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 18/55 (32%), Positives = 34/55 (61%)
 Frame = -1

Query: 459  DLESFIQVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTW 295
            DL++F++VVK + D  + +++ +  +  P  ++LK + HY+PT EL  +  T  W
Sbjct: 930  DLDTFLKVVKTIPDNSYCKMRLMTFDNVPFAISLKTNYHYFPTAELKRDNITHKW 984



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = -1

Query: 459 DLESFIQVVKGLEDREFVRVKTVHLNGK--PRVLTLKQDLHYWPTWEL-TFEPETDTWKR 289
           DL++FI+++K + DR+ V V+  HL  +  P V ++  D H+   + + T    T  W  
Sbjct: 455 DLDTFIEIMKTIPDRKRVTVRYHHLTDQHSPLVTSIYIDRHWCNEFRVYTRNDTTGIWDY 514

Query: 288 RTI 280
           + +
Sbjct: 515 KNV 517



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>CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7)|
          Length = 401

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 80  QLSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLG 205
           +L  G+EI +S++E H  L+P   LAHR   H  V  L   G
Sbjct: 106 RLEAGDEIAISALEHHANLLPWQQLAHRRNLHLVVLPLDAHG 147



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>PGK_NITEU (Q82XE8) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 392

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = +1

Query: 241 RQNKSSHGWLQRFYCSPLPCVGLRFKSELPGRPIVKVLFQSEHPWFPVQMDGLHPNKLTV 420
           R   S+HG  +    +P+ C G+    EL    + K L Q  HP   +        KLTV
Sbjct: 147 RAEASTHGIAKY---APIACAGILLTEELDA--LTKALHQPAHPLVAIVGGSKVSTKLTV 201

Query: 421 FQSL 432
            +SL
Sbjct: 202 LESL 205



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>BUR1_GIBZE (Q4I5U9) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC|
           2.7.11.23)
          Length = 473

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 364 EHPWFPVQMDGLHPNKLTVFQSLHHLNK 447
           +HPWF +Q   L P+++  ++  H L++
Sbjct: 335 QHPWFKMQPLPLEPHEIPTYEESHELDR 362



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>METX_YEAST (Q04533) Putative cystathionine gamma-synthase YML082W (EC|
           2.5.1.48) (O-succinylhomoserine (thiol)-lyase)
          Length = 649

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -1

Query: 417 REFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKR 289
           RE+VR K  H NGK R+L L                E  TWKR
Sbjct: 90  REYVRRKCAHRNGKVRILQL--------ATAKPINEEQKTWKR 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,527,688
Number of Sequences: 219361
Number of extensions: 1372136
Number of successful extensions: 3421
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3421
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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