>GIDA_BUCAP (O51879) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 631

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 243 LQLTDAPYKTDTAGRTEPPHLDINLWNMQGLLMHFVSVP 359
           L+L D P++ D      PP +DIN  N + L +    VP
Sbjct: 187 LRLRDLPFRVDRLKTGTPPRIDINTINFENLFVQHGDVP 225

>RP8L3_ARATH (Q9FJB5) Probable disease resistance RPP8-like protein 3|
          Length = 901

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 15/51 (29%), Positives = 31/51 (60%)
 Frame = -1

Query: 464 IISLPKLGKVPQGIESLRSLKKLTLKYLHKDFRSHWDTNEMHQKTLHVPEV 312
           I S  KL ++P G++ + SLK+L ++ + ++++      E + K  H+P+V
Sbjct: 841 IHSCEKLEELPDGLKYVTSLKELKIEGMKREWKEKL-VGEDYYKVQHIPDV 890

>GRK5_HUMAN (P34947) G protein-coupled receptor kinase 5 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK5)
          Length = 590

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 174 RQMLMTTSIYNHKFAETIKSTTQLQLT 254
           R++L T  +Y+HKF+E  KS  ++ LT
Sbjct: 399 RRVLETEEVYSHKFSEEAKSICKMLLT 425

>GRK5_BOVIN (P43249) G protein-coupled receptor kinase 5 (EC 2.7.11.16) (G|
           protein-coupled receptor kinase GRK5)
          Length = 590

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 174 RQMLMTTSIYNHKFAETIKSTTQLQLT 254
           R++L T  +Y+HKF+E  KS  ++ LT
Sbjct: 399 RRVLETEEVYSHKFSEEAKSICKMLLT 425

>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 230 kDa
            subunit) (TAFII-230) (TAFII250) (TBP-associated factor
            230 kDa) (p230)
          Length = 2129

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 231  STTQLQLTDAPYKTDTAGRTEPPHLDINLWNMQGLLMHFVSVPMTSEILVQ 383
            S +Q+ + D+  +  T    +PP LD         L H V  PM SE L Q
Sbjct: 2065 SQSQIYMVDSSNEPTTLDYQQPPQLDFQQVQEMEQLQHQVMPPMQSEQLQQ 2115

>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780|
          Length = 906

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 464 IISLPKLGKVPQGIESLRSLKKLTLKYLHKDFRSHWDT-NEMHQKTLHVP 318
           I+   KL ++P G+  + SLK+L ++   K F+       E + K  HVP
Sbjct: 833 IVDCKKLKEIPDGLRFISSLKELAIRTNEKVFQKKVSKGGEDYYKMQHVP 882

>TIMP1_SHEEP (P50122) Metalloproteinase inhibitor 1 precursor (TIMP-1)|
          Length = 207

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +3

Query: 213 FAETIKSTTQLQLTDAPYKTDTAGRTEPPHLDINLWNMQGLLM-HFVSVPMTSEI-LVQI 386
           FA T+     L    AP +  T     PPH      N + ++   FV     +E  L Q 
Sbjct: 4   FAPTVSGILLLLWLTAPSRACTC---VPPHPQTAFCNSEVVIRAKFVGTAEVNETALYQR 60

Query: 387 LQCKLLKGAEGFNALRDLTKLR 452
            + K+ K  +GF+ALRD   +R
Sbjct: 61  YEIKMTKMFKGFSALRDAPDIR 82

>RP8L4_ARATH (Q9FJK8) Probable disease resistance RPP8-like protein 4|
          Length = 908

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/47 (27%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = -1

Query: 449 KLGKVPQGIESLRSLKKLTLKYLHKDFRSHW-DTNEMHQKTLHVPEV 312
           KL ++P G++ + SLK+L ++ + ++++       E + K  H+P+V
Sbjct: 855 KLKELPDGLKYITSLKELKIREMKREWKEKLVPGGEDYYKVQHIPDV 901

>MATK_HELBU (Q9XPN6) Maturase K (Intron maturase)|
          Length = 515

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 297 PHLDINLWNMQGLLMHFVSVPMTSEILVQILQCKL 401
           P L+  L ++  +L   +  P+  EILVQILQC++
Sbjct: 140 PFLEDKLSHLNYVLDILIPYPIHLEILVQILQCRI 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,868,637
Number of Sequences: 219361
Number of extensions: 1277919
Number of successful extensions: 3019
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3019
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)