Clone Name | rbastl43c06 |
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Clone Library Name | barley_pub |
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 30.8 bits (68), Expect = 1.7 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -3 Query: 271 CRPPHSTSSAACRRCPTGCSSCYDP 197 C P H S +C+RC + C C P Sbjct: 990 CSPQHYRDSGSCKRCDSHCVECQGP 1014
>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor| Length = 269 Score = 29.6 bits (65), Expect = 3.7 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 2/118 (1%) Frame = +1 Query: 106 TISSSGSHQSRTTTVISKLKEKQRRLIDRWMXXXXXXXXXXXXXXXXKKLNAADGMSPRN 285 T+S SGS + ++ S E +A++ S + Sbjct: 124 TVSESGSESATASSDASSASESSSAASSSASESSSAASSSASESSSAASSSASESSSAAS 183 Query: 286 LGCRR*KKPMPSSSALKGTA*STSAVSRQATANTPVARGSRHDSSA--STRSPCAATS 453 K S+ + +A S++A S + A++ + ++ SSA ST S +ATS Sbjct: 184 SSASEAAKSSSSAKSSGSSAASSAASSASSKASSAASSSAKASSSAEKSTNSSSSATS 241
>ZP2_CANFA (P47983) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 715 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 258 IQLLPPPAVAVRPGALAATIHPSIDQPAL 172 +Q LPPP +VRPG LA + D+ L Sbjct: 475 VQSLPPPVASVRPGPLALILQTYPDKSYL 503
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 6/65 (9%) Frame = -3 Query: 370 AC*RRWCSTPCPSRRCCWXXXXXXXXXXXXXXTCRPPHSTSSAACRR------CPTGCSS 209 AC C PC + CC C P SS C+ C +GC+S Sbjct: 21 ACPESCCEPPCCAPSCC-------APAPCLTLVCTPVSCVSSPCCQAACEPSPCQSGCTS 73 Query: 208 CYDPS 194 PS Sbjct: 74 SCTPS 78
>ZP2_BOVIN (Q9BH10) Zona pellucida sperm-binding protein 2 precursor (Zona| pellucida glycoprotein ZP2) (Zona pellucida protein A) Length = 713 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 258 IQLLPPPAVAVRPGALAATIHPSIDQPAL 172 ++ LPPP +V+PG LA T+ D L Sbjct: 473 VESLPPPVASVKPGPLALTLQTYPDNSYL 501
>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)| Length = 1679 Score = 28.5 bits (62), Expect = 8.2 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -3 Query: 259 HSTSSAACRRCPTGCSSCYDP 197 + T+SA C+ C C SC+ P Sbjct: 1392 YDTTSATCKTCHDSCRSCFGP 1412
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/64 (26%), Positives = 21/64 (32%), Gaps = 6/64 (9%) Frame = -3 Query: 367 C*RRWCSTPCPSRRCCWXXXXXXXXXXXXXXTCRPPHSTSSAACR------RCPTGCSSC 206 C C PC + CC C P SS C+ C +GC+S Sbjct: 22 CPESCCEPPCSAPSCC-------APAPSLSLVCTPVSCVSSPCCQAACEPSACQSGCTSS 74 Query: 205 YDPS 194 PS Sbjct: 75 CTPS 78
>PYC_ASPNG (Q9HES8) Pyruvate carboxylase (EC 6.4.1.1) (Pyruvic carboxylase)| (PCB) Length = 1192 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 107 VRSSFDHLFAHRRKASEAYLVMLISIINMAAAYL 6 V S DHL HR+KA EAY++ AYL Sbjct: 70 VYSHEDHLSMHRQKADEAYMIGKRGQYTPVGAYL 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,061,585 Number of Sequences: 219361 Number of extensions: 845377 Number of successful extensions: 3033 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2872 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3029 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)