ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465425.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.39
2gb|AY083540.1| Macaca mulatta collagen-like tail subunit of asym... 44 0.39
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
5dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
6dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
7dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
8gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome... 42 1.5
9gb|AY714221.1| Homo sapiens peptidylprolyl isomerase D (cyclophi... 42 1.5
10gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 42 1.5
11gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, comple... 42 1.5
12emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on ch... 42 1.5
13dbj|D63861.1| Homo sapiens DNA for cyclophilin 40, complete cds 42 1.5
14gb|AC107219.5| Homo sapiens BAC clone RP11-575B4 from 4, complet... 42 1.5
15emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 ... 42 1.5
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, comple... 42 1.5
18emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in ... 42 1.5
19emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, ... 42 1.5
20gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, co... 42 1.5
21emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
22gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complet... 42 1.5
23gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, comp... 40 6.1
24gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, comp... 40 6.1
25gb|BC053182.1| Danio rerio zgc:63987, mRNA (cDNA clone MGC:63987... 40 6.1
26emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in l... 40 6.1
27gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome... 40 6.1
28emb|AL590006.4| Human DNA sequence from clone RP11-103C16 on chr... 40 6.1
29gb|U55182.1|HSGOLF03 Homo sapiens Golf alpha gene, exons 6, 7, 8... 40 6.1
30emb|X78201.1|SS17BED S.scrofa 17beta-estradiol dehydrogenase mRNA 40 6.1
31gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, comple... 40 6.1
32emb|BX571869.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.1
33gb|AC122153.4| Oryctolagus cuniculus clone LB1-9L8, complete seq... 40 6.1
34emb|AJ130881.1|HBI130881 Helicobacter bizzozeronii ureB gene, pa... 40 6.1
35gb|AF330621.1| Helicobacter bizzozeronii tRNA ribosyltransferase... 40 6.1
36ref|NM_200356.1| Danio rerio zgc:63987 (zgc:63987), mRNA 40 6.1
37gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold 40 6.1
38emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in ... 40 6.1
39gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex B... 40 6.1
40dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 6.1
41ref|NM_214306.1| Sus scrofa 17beta-estradiol dehydrogenase (HSD1... 40 6.1
42gb|AC112485.4| Homo sapiens 3 BAC RP11-776B11 (Roswell Park Canc... 40 6.1
43gb|AF508003.1| Helicobacter bizzozeronii strain Storkis urease U... 40 6.1
44emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chro... 40 6.1
45emb|AL928730.7| Mouse DNA sequence from clone RP23-186A19 on chr... 40 6.1
46gb|AC163648.2| Mus musculus BAC clone RP23-220E20 from chromosom... 40 6.1
47dbj|AP001269.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.1 
>ref|XM_465425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 234

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 345 gtgaattctttcacttccagccatatattc 374
           |||| ||| |||||||||||||||||||||
Sbjct: 174 gtgagttccttcacttccagccatatattc 145
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>gb|AY083540.1| Macaca mulatta collagen-like tail subunit of asymmetric
           acetylcholinesterase (COLQ) gene, 3' UTR
          Length = 401

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 226 tcaggctcatcaaatagctttg 247
           ||||||||||||||||||||||
Sbjct: 255 tcaggctcatcaaatagctttg 234
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 345      gtgaattctttcacttccagccatatattc 374
                |||| ||| |||||||||||||||||||||
Sbjct: 14679659 gtgagttccttcacttccagccatatattc 14679630



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 345      gtgaattctttcacttccagccatatattc 374
                |||| ||| |||||||||||||||||||||
Sbjct: 14676799 gtgagttccttcacttccagccatatattc 14676770
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 345      gtgaattctttcacttccagccatatattc 374
                |||| ||| |||||||||||||||||||||
Sbjct: 15068589 gtgagttccttcacttccagccatatattc 15068560
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>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0533E11
          Length = 150678

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 345   gtgaattctttcacttccagccatatattc 374
             |||| ||| |||||||||||||||||||||
Sbjct: 74370 gtgagttccttcacttccagccatatattc 74341
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>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0474F07
          Length = 136440

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 345    gtgaattctttcacttccagccatatattc 374
              |||| ||| |||||||||||||||||||||
Sbjct: 117363 gtgagttccttcacttccagccatatattc 117334



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 345    gtgaattctttcacttccagccatatattc 374
              |||| ||| |||||||||||||||||||||
Sbjct: 114503 gtgagttccttcacttccagccatatattc 114474
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>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1224_G08
          Length = 113496

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 345   gtgaattctttcacttccagccatatattc 374
             |||| ||| |||||||||||||||||||||
Sbjct: 24238 gtgagttccttcacttccagccatatattc 24209



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 345   gtgaattctttcacttccagccatatattc 374
             |||| ||| |||||||||||||||||||||
Sbjct: 21378 gtgagttccttcacttccagccatatattc 21349
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>gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome 16, complete sequence
          Length = 215559

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    acaacagaaactccacataca 176
              |||||||||||||||||||||
Sbjct: 124435 acaacagaaactccacataca 124455
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>gb|AY714221.1| Homo sapiens peptidylprolyl isomerase D (cyclophilin D) (PPID) gene,
            complete cds
          Length = 17435

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 78   gtacacaagggtcttcagaga 98
            |||||||||||||||||||||
Sbjct: 8355 gtacacaagggtcttcagaga 8335
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>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    acaacagaaactccacataca 176
              |||||||||||||||||||||
Sbjct: 128646 acaacagaaactccacataca 128666
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>gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, complete sequence
          Length = 176259

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 277   aatataaacatctacttcagt 297
             |||||||||||||||||||||
Sbjct: 14410 aatataaacatctacttcagt 14430
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>emb|AL137021.15| Human DNA sequence from clone RP11-202A15 on chromosome 9q31.1-32,
             complete sequence
          Length = 80658

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 381   ctgttattcaagaacattatg 401
             |||||||||||||||||||||
Sbjct: 74494 ctgttattcaagaacattatg 74474
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>dbj|D63861.1| Homo sapiens DNA for cyclophilin 40, complete cds
          Length = 17133

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 78   gtacacaagggtcttcagaga 98
            |||||||||||||||||||||
Sbjct: 8937 gtacacaagggtcttcagaga 8917
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>gb|AC107219.5| Homo sapiens BAC clone RP11-575B4 from 4, complete sequence
          Length = 187431

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 78    gtacacaagggtcttcagaga 98
             |||||||||||||||||||||
Sbjct: 80966 gtacacaagggtcttcagaga 80986
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>emb|BX510306.17| Zebrafish DNA sequence from clone CH211-195F19 in linkage group 13,
              complete sequence
          Length = 194184

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 117    cgatttatgacatggcatgtt 137
              |||||||||||||||||||||
Sbjct: 179702 cgatttatgacatggcatgtt 179682
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 354      ttcacttccagccatatattc 374
                |||||||||||||||||||||
Sbjct: 11146202 ttcacttccagccatatattc 11146182
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>gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, complete sequence
          Length = 187268

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 352   ctttcacttccagccatatattcct 376
             |||||||||||||||| ||||||||
Sbjct: 12846 ctttcacttccagccaaatattcct 12870
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>emb|BX000536.7| Zebrafish DNA sequence from clone CH211-10C6 in linkage group 7,
             complete sequence
          Length = 199752

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   atttatgacatggcatgttct 139
             |||||||||||||||||||||
Sbjct: 16908 atttatgacatggcatgttct 16928
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>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence
          Length = 164218

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   cgatttatgacatggcatgtt 137
             |||||||||||||||||||||
Sbjct: 18600 cgatttatgacatggcatgtt 18580
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>gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, complete sequence
          Length = 156267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    acaacagaaactccacataca 176
              |||||||||||||||||||||
Sbjct: 139125 acaacagaaactccacataca 139145
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>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09,
             complete sequence
          Length = 141580

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 354   ttcacttccagccatatattc 374
             |||||||||||||||||||||
Sbjct: 14826 ttcacttccagccatatattc 14806
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>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence
          Length = 175691

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   aatataaacatctacttcagt 297
             |||||||||||||||||||||
Sbjct: 19358 aatataaacatctacttcagt 19338
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>gb|AC116778.9| Mus musculus chromosome 1, clone RP24-481H3, complete sequence
          Length = 132180

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   cacaacagaaactccacata 174
             ||||||||||||||||||||
Sbjct: 67783 cacaacagaaactccacata 67802
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>gb|AC120791.13| Mus musculus chromosome 7, clone RP23-56I4, complete sequence
          Length = 246249

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    gtcttttcttctgtgcctgc 425
              ||||||||||||||||||||
Sbjct: 223661 gtcttttcttctgtgcctgc 223680
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>gb|BC053182.1| Danio rerio zgc:63987, mRNA (cDNA clone MGC:63987 IMAGE:6792513),
           complete cds
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 404 gagtcttttcttctgtgcct 423
           ||||||||||||||||||||
Sbjct: 131 gagtcttttcttctgtgcct 150
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>emb|CR792425.6| Zebrafish DNA sequence from clone DKEY-81N9 in linkage group 2,
             complete sequence
          Length = 168311

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   gatttatgacatggcatgtt 137
             ||||||||||||||||||||
Sbjct: 15423 gatttatgacatggcatgtt 15442
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>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence
          Length = 173971

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 406   gtcttttcttctgtgcctgc 425
             ||||||||||||||||||||
Sbjct: 35755 gtcttttcttctgtgcctgc 35774
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>emb|AL590006.4| Human DNA sequence from clone RP11-103C16 on chromosome 6 Contains part
             of the PTPRK gene for protein tyrosine phosphatase
             receptor type K (R-PTP-KAPPA) and the 3' end of a novel
             gene, complete sequence
          Length = 42689

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   tcaaatagctttggatgact 254
             ||||||||||||||||||||
Sbjct: 36429 tcaaatagctttggatgact 36448
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>gb|U55182.1|HSGOLF03 Homo sapiens Golf alpha gene, exons 6, 7, 8, 9, and 10
          Length = 13452

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aacaacaacaccaagaaatcttaa 24
             |||||||||| |||||||||||||
Sbjct: 11439 aacaacaacaacaagaaatcttaa 11416
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>emb|X78201.1|SS17BED S.scrofa 17beta-estradiol dehydrogenase mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 gccatatattcctgcagctg 383
           ||||||||||||||||||||
Sbjct: 540 gccatatattcctgcagctg 521
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>gb|AC131956.1| Homo sapiens BAC clone RP11-793B23 from 4, complete sequence
          Length = 195404

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   ttattcaagaacattatgca 403
             ||||||||||||||||||||
Sbjct: 46148 ttattcaagaacattatgca 46167
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>emb|BX571869.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              11/17
          Length = 349284

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gacatggcatgttcttcaga 144
              ||||||||||||||||||||
Sbjct: 309614 gacatggcatgttcttcaga 309633
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>gb|AC122153.4| Oryctolagus cuniculus clone LB1-9L8, complete sequence
          Length = 216345

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    ttccagccatatattcctgc 378
              ||||||||||||||||||||
Sbjct: 127188 ttccagccatatattcctgc 127169
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>emb|AJ130881.1|HBI130881 Helicobacter bizzozeronii ureB gene, partial, isolate CCUG 35545
          Length = 692

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 127 catggcatgttcttcagaggcacg 150
           |||||||| |||||||||||||||
Sbjct: 529 catggcatattcttcagaggcacg 506
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>gb|AF330621.1| Helicobacter bizzozeronii tRNA ribosyltransferase gene, partial cds;
            GidB, complete cds; urease gene cluster, complete
            sequence and unknown gene
          Length = 8406

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 127  catggcatgttcttcagaggcacg 150
            |||||||| |||||||||||||||
Sbjct: 3633 catggcatattcttcagaggcacg 3610
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>ref|NM_200356.1| Danio rerio zgc:63987 (zgc:63987), mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 404 gagtcttttcttctgtgcct 423
           ||||||||||||||||||||
Sbjct: 131 gagtcttttcttctgtgcct 150
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>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 359    ttccagccatatattcctgc 378
              ||||||||||||||||||||
Sbjct: 368204 ttccagccatatattcctgc 368185
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>emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in linkage group 1, complete
              sequence
          Length = 255895

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    gatttatgacatggcatgtt 137
              ||||||||||||||||||||
Sbjct: 115804 gatttatgacatggcatgtt 115823
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>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete
              sequence
          Length = 181079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aaactccacatacaaaagaa 182
              ||||||||||||||||||||
Sbjct: 179840 aaactccacatacaaaagaa 179859
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     aaactccacatacaaaagaa 182
               ||||||||||||||||||||
Sbjct: 2042297 aaactccacatacaaaagaa 2042278
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>ref|NM_214306.1| Sus scrofa 17beta-estradiol dehydrogenase (HSD17B4), mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 gccatatattcctgcagctg 383
           ||||||||||||||||||||
Sbjct: 540 gccatatattcctgcagctg 521
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>gb|AC112485.4| Homo sapiens 3 BAC RP11-776B11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168500

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    attgtgaattctttcacttc 361
              ||||||||||||||||||||
Sbjct: 124378 attgtgaattctttcacttc 124397
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>gb|AF508003.1| Helicobacter bizzozeronii strain Storkis urease UreA (ureA) and
            urease UreB (ureB) genes, partial cds
          Length = 1665

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 127  catggcatgttcttcagaggcacg 150
            |||||||| |||||||||||||||
Sbjct: 1080 catggcatattcttcagaggcacg 1057
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>emb|AL672303.5| Mouse DNA sequence from clone RP23-461A6 on chromosome X, complete
           sequence
          Length = 200875

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 156 acaacagaaactccacatac 175
           ||||||||||||||||||||
Sbjct: 798 acaacagaaactccacatac 779
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>emb|AL928730.7| Mouse DNA sequence from clone RP23-186A19 on chromosome X, complete
              sequence
          Length = 188862

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    acaacagaaactccacatac 175
              ||||||||||||||||||||
Sbjct: 187660 acaacagaaactccacatac 187641
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>gb|AC163648.2| Mus musculus BAC clone RP23-220E20 from chromosome 17, complete
             sequence
          Length = 169556

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 415   tctgtgcctgcggtgtttagaatg 438
             ||||||||||| ||||||||||||
Sbjct: 96179 tctgtgcctgctgtgtttagaatg 96156
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>dbj|AP001269.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-820I16, complete
            sequences
          Length = 146181

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aacaacaacaccaagaaatcttaa 24
            |||||||||| |||||||||||||
Sbjct: 7212 aacaacaacaacaagaaatcttaa 7189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,577,854
Number of Sequences: 3902068
Number of extensions: 4577854
Number of successful extensions: 85294
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85106
Number of HSP's gapped (non-prelim): 188
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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