Clone Name | rbastl43b10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7... | 29 | 3.7 | 2 | CUBN_CANFA (Q9TU53) Cubilin precursor | 29 | 3.7 | 3 | GATA_COREF (Q8FPZ0) Glutamyl-tRNA(Gln) amidotransferase subunit ... | 28 | 8.2 |
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>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 28.9 bits (63), Expect = 3.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 210 PCGGMPC*LSFDHVCIDVAFTLEIP 136 P GG+P L+ H+C+ AF L IP Sbjct: 604 PPGGVPSSLAESHLCLPSAFALSIP 628
>CUBN_CANFA (Q9TU53) Cubilin precursor| Length = 3620 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 127 GLPGNF*SKGHINTYMIKGELTWHATTRP 213 G G+F S G+ NTY E W+ TT P Sbjct: 1394 GTTGSFSSPGYPNTYPPNKECIWYITTAP 1422
>GATA_COREF (Q8FPZ0) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 497 Score = 27.7 bits (60), Expect = 8.2 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 27 DQINVEYKPTNPKTIFYLGSKLT 95 +Q++V PT P T F LG K+T Sbjct: 412 EQVDVLVSPTTPSTAFKLGDKIT 434 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,989,800 Number of Sequences: 219361 Number of extensions: 572930 Number of successful extensions: 1106 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1106 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)