>TRPB_PSESY (P34817) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 408

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -3

Query: 430 NKSARRHGEVPAVGGAHDLRHGQGRAALRPEDH-----VAAQGDRSKHVVRHTFKTNRYV 266
           +K  R  G +PA+  AH L     RA   P+DH     ++ +GD+    V H  +T +  
Sbjct: 347 HKCCRLEGIIPALESAHALAEVFKRAPTLPKDHLMVVNLSGRGDKDMQTVMHHMETTKQE 406

Query: 265 LH 260
            H
Sbjct: 407 KH 408

>SYN_CLOPE (P58693) Asparaginyl-tRNA synthetase (EC 6.1.1.22)|
           (Asparagine--tRNA ligase) (AsnRS)
          Length = 465

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
 Frame = +1

Query: 115 SFYNKCCPSKRKNARPKNTYMILQLHNAFAFFSINKNHVLIP-RAEIQSSVIRNGLS*MY 291
           S Y        K  +       L+  NAF F  +N        +    S+ I N      
Sbjct: 9   SLYRNTSEYSDKKVKISGWIRTLRASNAFGFIEVNDGSFFKNVQVVFDSAKISNYKEISK 68

Query: 292 VSLHACFDLLGPPRGLLDAEQPF-------LARGVSHAHLPLQGLRHAFERSYCLRVVPH 450
           + + +   ++G      D++QPF       +  G+S +  PLQ  RH FE    LR + H
Sbjct: 69  LPISSSISVIGTLVETPDSKQPFEIQAEEIIVEGMSDSDYPLQKKRHTFE---YLRTIAH 125

>FANCA_HUMAN (O15360) Fanconi anemia group A protein (Protein FACA)|
          Length = 1455

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 276  FVLNVCLTTCLLRSPWAATWSSGRRAALPCPWRKSCAPP 392
            F+L  C T C L    A  W       L C WR+ C  P
Sbjct: 1154 FILAKCQTKCPLILTSALVWWPSLEPVLLCRWRRHCQSP 1192

>YIAO_ECOLI (P37676) 2,3-diketo-L-gulonate-binding periplasmic protein yiaO|
           precursor (2,3-DKG-binding protein) (Extracytoplasmic
           solute receptor protein yiaO)
          Length = 328

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/53 (39%), Positives = 25/53 (47%)
 Frame = +1

Query: 244 AEIQSSVIRNGLS*MYVSLHACFDLLGPPRGLLDAEQPFLARGVSHAHLPLQG 402
           A+   S +R G   M +S    F  L P   LLD   PFL R  +HAH  L G
Sbjct: 72  AQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDV--PFLFRDTAHAHKTLDG 122

>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 410 WRSPCSGRCA*LTPRA 363
           WRSPC  RCA   PRA
Sbjct: 110 WRSPCGSRCAPPAPRA 125

>ADFP_HUMAN (Q99541) Adipophilin (Adipose differentiation-related protein)|
           (ADRP)
          Length = 437

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = +1

Query: 55  ELVPPCVLWLYLSTYSTALHSFYNKCCPSKRKNARPKNTYMILQLHNAFAFFSINKNHVL 234
           +LV     ++ L + ST LHS   +   S+ K A+ K+   I QLH+        + +V 
Sbjct: 209 DLVQKPSYYVRLGSLSTKLHSRAYQQALSRVKEAKQKSQQTISQLHSTVHLIEFARKNVY 268

Query: 235 IPRAEIQSS 261
               +IQ +
Sbjct: 269 SANQKIQDA 277

>VG12_SHV21 (P24915) Hypothetical gene 12 protein|
          Length = 169

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 223 SC*C*KRQMHCAAVESCMCFSALHSFFCLDNICCKMNVMLYCKSIGRATARRVVPVLQE 47
           +C C  R  H        CF + H  FC      K  +M+ C S+ + ++    PVL++
Sbjct: 22  ACDCPSRVHHTCLQSHIQCFKSSHCTFCEK----KYKIMVMCNSLKKCSS----PVLEQ 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,109,192
Number of Sequences: 219361
Number of extensions: 1247774
Number of successful extensions: 3289
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3288
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)