>MSG5_YEAST (P38590) Tyrosine-protein phosphatase MSG5 (EC 3.1.3.48)|
          Length = 489

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -3

Query: 310 LHVPLESMLEDKDIQATIKELVTSSGRSFPGKTVDKAQPNAKKS*EQQRTPKNGQSSPG 134
           +H+P E  + + ++ +T K   ++S RSFP  T   + PN       + TP+   +  G
Sbjct: 385 VHMPEEDDIGNNEVSSTTKSYSSASFRSFPMVTNLSSSPNDSSVNSSEVTPRTPATLTG 443

>EBP2_ARATH (Q9LUJ5) Probable rRNA-processing protein EBP2 homolog|
          Length = 293

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -2

Query: 311 PTCATGVHAGGQGHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPK 156
           P  + G  +GG+G P+   G + +++    +  GG+    +Q    TT D K
Sbjct: 226 PGVSPGDRSGGKGRPTSRMGNKKREFRDSKFGHGGRKGLSKQNTAETTNDFK 277

>BIN1_RAT (O08839) Myc box-dependent-interacting protein 1 (Bridging|
           integrator 1) (Amphiphysin-like protein) (Amphiphysin
           II)
          Length = 588

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 275 GHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKE 153
           G PS  +G+    W     + G   PAE  ++VG T++P E
Sbjct: 434 GEPSSAEGSFAVAWPSQTAEPGPAQPAEASEVVGGTQEPGE 474

>SSH3_RAT (Q5XIS1) Protein phosphatase Slingshot homolog 3 (EC 3.1.3.48) (EC|
           3.1.3.16) (SSH-3L)
          Length = 652

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 221 WQDGGQGPAERQKIVGTTKDPKERSVIAGRDHDHEKKRGR 102
           +Q  GQG  + Q+  GT+  P+ R VI     D  ++ G+
Sbjct: 612 FQGQGQGQGQEQRETGTSSTPRLRKVIRQASVDDSREEGK 651

>KE4_PIG (Q29175) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4) (Fragments)
          Length = 155

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
 Frame = -2

Query: 284 GGQGHPSDHQGARHKQWEVVPWQDG-----GQGPAERQKIVGTTKD-------PKERSVI 141
           GG GH   H  A   + EV+ W+ G      Q   E +K  G ++        PK+  V 
Sbjct: 47  GGHGHSHGHGHAHGTRMEVMAWKTGVSSKEKQSSEEEEKEAGASRKRRGGSTRPKDGPV- 105

Query: 140 AGRDHDHEKKRGRYRINKAVYL 75
               H  E+K+G+  + + + L
Sbjct: 106 -RPQHSGEEKQGQTCVCQGIIL 126

>TSP3_MOUSE (Q05895) Thrombospondin-3 precursor|
          Length = 956

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 199 GPCPPSCQGTTSHC 240
           GPCPP  QG  +HC
Sbjct: 301 GPCPPGLQGNGTHC 314

>TSP3_HUMAN (P49746) Thrombospondin-3 precursor|
          Length = 956

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 199 GPCPPSCQGTTSHC 240
           GPCPP  QG  +HC
Sbjct: 301 GPCPPGLQGNGTHC 314

>BBX_HUMAN (Q8WY36) HMG box transcription factor BBX (Bobby sox homolog) (HMG|
           box-containing protein 2)
          Length = 941

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 296 GVHAGGQGHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKERSVI--AGRDHD 123
           G  + G+G+ SDH+G     W    W     G +  +K   T   PKE  ++  A  D +
Sbjct: 639 GKRSSGKGNSSDHEGC----WNEESWTFSQSGTSGSKKFKKT--KPKEDCLLGSAKLDEE 692

Query: 122 HEKK 111
            EKK
Sbjct: 693 FEKK 696

>THIE_CHLCV (Q824E9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP|
           pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 212

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +3

Query: 180 DFLAFGWALSTVLPGNDLPLLVTSSLMV 263
           + L+FG AL ++L   D+PL+V+ S+ V
Sbjct: 48  ELLSFGGALKSILDPLDIPLIVSDSVSV 75

>WRKY8_ARATH (Q9FL26) Probable WRKY transcription factor 8 (WRKY DNA-binding|
           protein 8)
          Length = 326

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -2

Query: 272 HPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKER-----SVIAGRDHDHEKKR 108
           HP +  G   K+ EV   +DGG+     QK+V T K  +++     S +   + DH +  
Sbjct: 129 HPGEDSGKIRKKREV---RDGGEDDQRSQKVVKTKKKEEKKKEPRVSFMTKTEVDHLEDG 185

Query: 107 GRYR 96
            R+R
Sbjct: 186 YRWR 189

>BIN1_MOUSE (O08539) Myc box-dependent-interacting protein 1 (Bridging|
           integrator 1) (Amphiphysin-like protein) (Amphiphysin
           II) (SH3-domain-containing protein 9)
          Length = 588

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 275 GHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKE 153
           G PS  +G+    W     + G   PAE  ++VG  ++P E
Sbjct: 434 GEPSSAEGSFAVAWPSQTAEPGPAQPAEASEVVGGAQEPGE 474

>UBP2L_HUMAN (Q14157) Ubiquitin-associated protein 2-like|
          Length = 983

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -2

Query: 278 QGHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKERSVIAGRDHDHEKKRG 105
           +G+P  H       WE+V  + G  G    QK  G T+  +E      RD D+ ++RG
Sbjct: 88  EGNPDTHS------WEMVGKKKGVSG----QKDGGQTESNEEGKENRDRDRDYSRRRG 135

>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)|
          Length = 688

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 296 GVHAGGQGHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKER 150
           G  AGG G    ++G+   QW       G   P   +++ GT  DP ++
Sbjct: 120 GAGAGGGGGSFSNRGSGDGQWRDGKHIPGPANPRVERELFGTPDDPSKQ 168

>TFP11_MOUSE (Q9ERA6) Tuftelin-interacting protein 11 (Tuftelin-interacting|
           protein 39)
          Length = 838

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 293 VHAGGQGHPSDHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKERSVIAGRDHDHEK 114
           ++  G+GH  D      + +E+  W    +    RQ+    TK+     V A RD D E+
Sbjct: 6   LYRDGEGHLDDDDDDERENFEITDWDLQNEFNPNRQR-HWQTKEEATYGVWAERDSDEER 64

>VWF_CANFA (Q28295) Von Willebrand factor precursor (vWF)|
          Length = 2813

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 205  CPPSCQGTTSHCL*RAP*WSLGCPCPP 285
            CP  C+G TS C  +    S GC CPP
Sbjct: 2216 CPRLCEGNTSSCGDQP---SEGCFCPP 2239

>MTHR1_ARATH (Q9SE60) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)|
           (AtMTHFR1)
          Length = 592

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 304 VPLESMLEDKDIQATIKELVTSSGRSFPGKTVDKAQPNAKKS*EQ 170
           VPL+S+   +D+Q   KEL   + +S P   +D  QP  K   EQ
Sbjct: 386 VPLKSI---EDVQEKFKELCIGNLKSSPWSELDGLQPETKIINEQ 427

>KNRL_DROME (P13054) Knirps-related protein|
          Length = 647

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -2

Query: 365 SGGNNQRPH*PEALLEIPPTCATGVHAGGQGHPSDHQG 252
           SGG    P+  + +  +PP  A     G  GHP  + G
Sbjct: 128 SGGGQGMPNGVKGMSGVPPPAAAAAALGMLGHPGGYPG 165

>PNTB_HAEIN (P43010) NAD(P) transhydrogenase subunit beta (EC 1.6.1.2)|
           (Pyridine nucleotide transhydrogenase subunit beta)
           (Nicotinamide nucleotide transhydrogenase subunit beta)
          Length = 474

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 156 FGVLCCSYDFLAFGWALSTVLPGNDLPLLVT 248
           F VL  +   LAFGW L   + G D+P++V+
Sbjct: 202 FPVLLMTAIALAFGWHLVASIGGADMPVVVS 232

>DP2L_ARCFU (O28552) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)|
          Length = 1143

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -2

Query: 263 DHQGARHKQWEVVPWQDGGQGPAERQKIVGTTKDPKERSVIAGRD-HDHEKKRGRYRI 93
           D  G    +W     + GG   +E +K V   KD     ++AGR    H  ++G +R+
Sbjct: 278 DEVGIEGWEWLDALIKGGGDSGSEEEKAVIKPKDKYLSDIVAGRPVLSHPSRKGGFRL 335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,599,216
Number of Sequences: 219361
Number of extensions: 1118838
Number of successful extensions: 3102
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3097
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)