>NADB2_RALSO (Q8XQG4) L-aspartate oxidase 2 (EC 1.4.3.16) (LASPO 2) (Quinolinate|
           synthetase B 2)
          Length = 536

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 298 CLLSSTDAAGVSSRLELALPRRIQ 369
           C  S TD AG +SRL L LP RI+
Sbjct: 396 CAQSVTDTAGSASRLRLTLPERIE 419

>URED_SYNY3 (P73047) Urease accessory protein ureD|
          Length = 270

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 323 AASVDERRQWHAQSWFRYESFGHRAKLSRELI*KLSKKERLY 198
           A++V+    W A  W RY+  GHR ++   L+    K +R +
Sbjct: 4   ASTVNPSAPWQANLWLRYDRPGHRTRMVECLVQAPLKVQRSF 45

>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 RRKGCACGSMETLNPTRKSKLQAGGDPRRVGRREKA 298
           R+   AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 601 RQLELACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 RRKGCACGSMETLNPTRKSKLQAGGDPRRVGRREKA 298
           R+   AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 601 RQLELACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 RRKGCACGSMETLNPTRKSKLQAGGDPRRVGRREKA 298
           R+   AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 601 RQLELACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>SYK2_MYCTU (P94974) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 96  VLPLQRRNAVHKGHRP 143
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>SYK2_MYCBO (Q7VEV7) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 96  VLPLQRRNAVHKGHRP 143
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>MAX2_ORYSA (Q5VMP0) F-box/LRR-repeat MAX2 homolog (F-box and leucine-rich|
           repeat MAX2 homolog)
          Length = 720

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 408 RRRKGCACGSMETLNPTRKSKLQAGGDPRRVG 313
           R R   ACG M       +S+L   GDPR  G
Sbjct: 38  RHRAALACGRMRAAERATRSELSLRGDPRSPG 69

>Y1356_MYCBO (P64806) Hypothetical protein Mb1356|
          Length = 98

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 332 ETPAASVDERRQWHAQSW 279
           + P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85

>Y1322_MYCTU (P64805) Hypothetical protein Rv1322/MT1363.1|
          Length = 98

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 332 ETPAASVDERRQWHAQSW 279
           + P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85

>SETB2_HUMAN (Q96T68) Probable histone-lysine N-methyltransferase, H3 lysine-9|
           specific (EC 2.1.1.43) (Histone H3-K9 methyltransferase)
           (H3-K9-HMTase) (SET domain bifurcated 2) (Chronic
           lymphocytic leukemia deletion region gene 8 protein)
          Length = 719

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 265 LSYLNHDCACHCLLSSTDAAGVSSRLELALPRRIQRLHTATGA 393
           LSY +HDC+  CL+         + L+L +    QR H  T +
Sbjct: 140 LSYQSHDCSGACLMKMPLNLKGENPLQLPIKCHFQRRHAKTNS 182

>N4BM_HUMAN (O95298) NADH-ubiquinone oxidoreductase subunit B14.5b (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-B14.5b) (CI-B14.5b)
          Length = 119

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = -3

Query: 220 LVRKRDYIYAIRRRELY 170
           LV++ DY+YA+R RE++
Sbjct: 74  LVKREDYLYAVRDREMF 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,104,660
Number of Sequences: 219361
Number of extensions: 980810
Number of successful extensions: 2484
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2484
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)