ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl43a05 |
|---|---|
| Clone Library Name | barley_pub |
>YEIT_SALTY (Q8ZNL8) Hypothetical oxidoreductase yeiT| Length = 413 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 242 QFLARQKDPTDHLHGGVSVLVGYDSLTSSSSAISPQHARHTSRLTID 382 +F A +K+ T GVS++ G+ + S + ++ H RH+ LT++ Sbjct: 291 EFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLE 337
>YEIT_SALTI (Q8Z5A6) Hypothetical oxidoreductase yeiT| Length = 413 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 242 QFLARQKDPTDHLHGGVSVLVGYDSLTSSSSAISPQHARHTSRLTID 382 +F A +K+ T GVS++ G+ + S + ++ H RH+ LT++ Sbjct: 291 EFPASEKEFTSTQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLE 337
>BTBD4_MOUSE (Q8BID6) BTB/POZ domain-containing protein 4| Length = 600 Score = 28.5 bits (62), Expect(2) = 1.5 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +3 Query: 162 LNRHSPGEPATENRNATPLSLGCHRKHNSWLGKRTQPIISTGGSRCSS 305 L+ G PA+ + A ++ R + WL +RT P S+G S +S Sbjct: 141 LSEFEIGTPASNSTEALISAVMAGRSISPWLARRTSPANSSGDSAIAS 188 Score = 21.2 bits (43), Expect(2) = 1.5 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +2 Query: 302 VGYDSLTSSSSAISPQH 352 VGY SL ISP H Sbjct: 221 VGYGSLRIKEEQISPSH 237
>GCSP_XYLFA (Q9PDJ4) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 993 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = +2 Query: 212 SALARMPQKTQFLARQKDPTDHLHGGVSVLVGYDSLTSSSSAISPQHARHTSRLTI 379 S+L + + F+ R P D + +VGYDSL S + AI P+ R T L + Sbjct: 19 SSLRDLEYQGAFVERHIGPNDVEIAQMLRVVGYDSLESLTDAIVPEKIRSTVALDL 74
>GCSP_XYLFT (Q87DR1) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 993 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +2 Query: 212 SALARMPQKTQFLARQKDPTDHLHGGVSVLVGYDSLTSSSSAISPQHARHTSRLTI 379 S+L + F+ R P D + +VGYDSL S + AI P+ R T L + Sbjct: 19 SSLRDLEYHGAFVERHIGPNDVEIAQMLRVVGYDSLESLTDAIVPEKIRSTVALDL 74
>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466| Length = 1526 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = +1 Query: 130 NKHTSEPPSFNLTDIPRENRLQKTEMLLRSRSDATENTILGSAK 261 NK T E P F + ++ + N Q ++LL +AT I+G+++ Sbjct: 522 NKLTGETPQFEVLELEKFNDEQIRQVLLYQAEEATVEQIMGNSQ 565
>K6PF_CANFA (P52784) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 781 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 666 GGSPTPFDRNFATKMGAK 683
>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)| Length = 843 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 229 ATENTILGSAKGPNRSSPRGGLGARRL 309 ++E+T+ GS G R S RGG GAR + Sbjct: 712 SSEDTVGGSGSGSGRGSSRGGGGAREI 738
>K6PF_RABIT (P00511) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 664 GGSPTPFDRNFATKMGAK 681
>K6PF_MOUSE (P47857) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 664 GGSPTPFDRNFATKMGAK 681
>K6PF_MACFA (Q60HD9) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 664 GGSPTPFDRNFATKMGAK 681
>K6PF_HUMAN (P08237) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 664 GGSPTPFDRNFATKMGAK 681
>K6PF_HORSE (Q867C9) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/18 (61%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GGSP+P+ R+FAT+ GA+ Sbjct: 664 GGSPTPFDRNFATKMGAK 681
>ARGC_XYLFA (Q9PEM6) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 333 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 20 LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 184 L LPN Y I ATA PPT + + ++ T F + + LP LT T+ G+ Sbjct: 77 LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128 Query: 185 TGYRKQKCYSALARM 229 CY+ ++ Sbjct: 129 KRISNPGCYATAMQL 143
>FIZ1_HUMAN (Q96SL8) Flt3-interacting zinc finger protein 1| Length = 496 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 Query: 460 HGEGTGSAPCSVAKERCHGEGEPP 389 HGEG G + A+ER GEPP Sbjct: 381 HGEGGGEEAAAAAREREPASGEPP 404
>ARGC_XYLFT (Q87EL1) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 327 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 20 LVLPN-----YSTII*ATAEKLLSVR*PPTAVHEPASKTGFTTNIHLNLPVLT*QTFPGR 184 L LPN Y I ATA PPT + + ++ T F + + LP LT T+ G+ Sbjct: 77 LALPNGNAAPYVHAIDATA--------PPTLIIDLSADTRFDPDWYYGLPELTRHTYTGQ 128 Query: 185 TGYRKQKCYSALARM 229 CY+ ++ Sbjct: 129 KRISNPGCYATAMQL 143
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +1 Query: 82 VTSHRSTRASQQNWLHNKHTSEPPSFNLTDIPRENR 189 V SH S RA+ Q + EPP F+ IP+ +R Sbjct: 516 VRSHESLRATLQRAPSPREPGEPPLFSRPSIPKTSR 551
>K6PF_RAT (P47858) 6-phosphofructokinase, muscle type (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme A) (PFK-A) (Phosphofructokinase-M) Length = 779 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/18 (55%), Positives = 16/18 (88%) Frame = +3 Query: 390 GGSPSPWQRSFATEQGAE 443 GG+P+P+ R+FAT+ GA+ Sbjct: 664 GGNPTPFDRNFATKMGAK 681
>GALT6_BOVIN (Q5EA41) Polypeptide N-acetylgalactosaminyltransferase 6 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 6) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 6) (Polypeptide GalNAc transferase 6) (GalNAc-T6) (pp-GaNTase 6) Length = 622 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = -1 Query: 350 VGERLQKRTRLNCHN 306 + ERLQ R RLNCHN Sbjct: 462 ISERLQLRERLNCHN 476 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,639,098 Number of Sequences: 219361 Number of extensions: 1459359 Number of successful extensions: 4114 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 3957 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4114 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
