>ref|NM_192023.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2709

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 191  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
            |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 2627 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 2568

                      
Query: 251  cacgcgacgc 260
            ||||||||||
Sbjct: 2567 cacgcgacgc 2558

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 191      cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
                |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 27864694 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 27864635

                          
Query: 251      cacgcgacgc 260
                ||||||||||
Sbjct: 27864634 cacgcgacgc 27864625



 Score = 46.1 bits (23), Expect = 0.065
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                            
Query: 191      cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
                |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 27892368 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 27892309

                           
Query: 251      cacgcgacgcc 261
                |||||||||||
Sbjct: 27892308 cacgcgacgcc 27892298

>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144G04
          Length = 194459

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 191   cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
             |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 51375 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 51316

                       
Query: 251   cacgcgacgc 260
             ||||||||||
Sbjct: 51315 cacgcgacgc 51306



 Score = 46.1 bits (23), Expect = 0.065
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 191   cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
             |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 79049 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 78990

                        
Query: 251   cacgcgacgcc 261
             |||||||||||
Sbjct: 78989 cacgcgacgcc 78979

>dbj|AK068284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I22, full
            insert sequence
          Length = 3081

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 191  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
            |||||||| ||||||| |||||||||||||  | |||| ||||||||||| || | ||||
Sbjct: 2670 cgctgctgaaagaagagcagcacggccagcgccgccgccccgcacggtatcacgacgtcc 2611

                      
Query: 251  cacgcgacgc 260
            ||||||||||
Sbjct: 2610 cacgcgacgc 2601

>ref|NM_192028.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2925

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 191  cgctgctgcaagaagaccagcacggccagcaaccccgctccgcacggtatgacaatgtcc 250
            |||||||||||||| | ||  | |||||||||| |||||||  |||| |  || ||||||
Sbjct: 2843 cgctgctgcaagaacagcacgaaggccagcaacgccgctcccaacggcacaacgatgtcc 2784

                       
Query: 251  cacgcgacgcc 261
            |||||||||||
Sbjct: 2783 cacgcgacgcc 2773

>gb|AY146173.1| HIV-1 isolate 134eMa88 from Malawi envelope glycoprotein (env)
           gene, partial cds
          Length = 417

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 117 tatctcgttttctgctagacta 138
           ||||||||||||||||||||||
Sbjct: 165 tatctcgttttctgctagacta 144

>gb|AC034254.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-257K10, complete
             sequence
          Length = 116022

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    caaggtacctttactttgttt 36
             |||||||||||||||||||||
Sbjct: 44053 caaggtacctttactttgttt 44073

>gb|AC162178.2| Mus musculus BAC clone RP23-410H21 from chromosome 6, complete sequence
          Length = 188061

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    caaggtacctttactttgttt 36
             |||||||||||||||||||||
Sbjct: 39964 caaggtacctttactttgttt 39984

>emb|AJ429852.1|HIM429852 Human immunodeficiency virus type 1 proviral partial env gene for
           gp120, strain 97NE82
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 tatctcgttttctgctagact 137
           |||||||||||||||||||||
Sbjct: 458 tatctcgttttctgctagact 438

>dbj|AB003011.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE341t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 tatctcgttttctgctagact 137
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>dbj|AB003010.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE331t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 tatctcgttttctgctagact 137
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>dbj|AB003009.1| Human immunodeficiency virus type 1 env gene for envelope
           glycoprotein, partial cds, clone 63PE321t
          Length = 720

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 tatctcgttttctgctagact 137
           |||||||||||||||||||||
Sbjct: 447 tatctcgttttctgctagact 427

>ref|XM_581281.2| PREDICTED: Bos taurus similar to Probable G-protein coupled
           receptor 35 (LOC505056), mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 agaagaccagcacggccagc 220
           ||||||||||||||||||||
Sbjct: 673 agaagaccagcacggccagc 654

>emb|AL031746.9|PFMAL1P3 Plasmodium falciparum DNA from MAL1P3
          Length = 67970

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   gtatctcgttttctgctagactag 139
             |||| |||||||||||||||||||
Sbjct: 19211 gtatatcgttttctgctagactag 19234

>gb|DQ061633.1| HIV-1 isolate K69_04_279 from Belgium envelope glycoprotein (env)
           gene, partial cds
          Length = 444

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 tctcgttttctgctagacta 138
           ||||||||||||||||||||
Sbjct: 130 tctcgttttctgctagacta 111

>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence
          Length = 159838

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    ctgctgcaagaagaccagca 212
              ||||||||||||||||||||
Sbjct: 136411 ctgctgcaagaagaccagca 136430

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 273      cccgggggctggcgtacaggtcgg 296
                ||||| ||||||||||||||||||
Sbjct: 23489312 cccggaggctggcgtacaggtcgg 23489335

>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11
              through 24, and complete cds
          Length = 150000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    ctgctgcaagaagaccagca 212
              ||||||||||||||||||||
Sbjct: 126944 ctgctgcaagaagaccagca 126963

>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence
          Length = 171834

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    ctgctgcaagaagaccagca 212
              ||||||||||||||||||||
Sbjct: 109931 ctgctgcaagaagaccagca 109950

>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1791_B03
          Length = 166214

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   cccgggggctggcgtacaggtcgg 296
             ||||| ||||||||||||||||||
Sbjct: 54995 cccggaggctggcgtacaggtcgg 55018

>dbj|AB016878.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQP15
          Length = 85567

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   ctccgcacggtatgacaatg 247
             ||||||||||||||||||||
Sbjct: 14791 ctccgcacggtatgacaatg 14810

>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1653_F07, complete sequence
          Length = 110109

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 273    cccgggggctggcgtacaggtcgg 296
              ||||| ||||||||||||||||||
Sbjct: 107987 cccggaggctggcgtacaggtcgg 108010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,203,650
Number of Sequences: 3902068
Number of extensions: 2203650
Number of successful extensions: 39380
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39318
Number of HSP's gapped (non-prelim): 62
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)