Clone Information

BLAST Search Result

Clone Name	rbastl43a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)	55	4e-08
2	CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte...	54	9e-08
3	NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homol...	53	2e-07
4	NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/...	53	2e-07
5	CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B...	52	3e-07
6	NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)	52	3e-07
7	CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte...	52	3e-07
8	CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte...	52	3e-07
9	CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte...	52	5e-07
10	NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NAD...	49	3e-06
11	NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)	42	5e-04
12	DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	40	0.001
13	DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1...	39	0.003
14	DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	39	0.004
15	DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1...	38	0.005
16	DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.1...	38	0.005
17	DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.1...	37	0.009
18	DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1...	35	0.044
19	DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.1...	32	0.28
20	AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor	32	0.37
21	PACS1_HUMAN (Q6VY07) Phosphofurin acidic cluster sorting protein...	31	0.63
22	PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1...	31	0.83
23	DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)	31	0.83
24	UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (E...	31	0.83
25	KR2_HHV11 (P04290) Probable serine/threonine-protein kinase (EC ...	30	1.1
26	LZTS2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 ...	30	1.4
27	PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein...	30	1.4
28	YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A...	30	1.4
29	Y396_HELPY (O25157) Hypothetical protein HP0396	29	2.4
30	Y396_HELPJ (Q9ZKF3) Hypothetical protein jhp_0985	29	2.4
31	INGR1_MOUSE (P15261) Interferon-gamma receptor alpha chain precu...	29	2.4
32	ADO_MOUSE (O54754) Aldehyde oxidase (EC 1.2.3.1) (Retinal oxidase)	28	4.1
33	CID_DROME (P19538) Protein cubitus interruptus	28	4.1
34	PLXA1_HUMAN (Q9UIW2) Plexin-A1 precursor (Semaphorin receptor NOV)	28	4.1
35	MSH4_MOUSE (Q99MT2) MutS protein homolog 4 (mMsh4)	28	4.1
36	WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel s...	28	4.1
37	DGP11_ARATH (Q9LK71) Putative protease Do-like 11, mitochondrial...	28	5.4
38	POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP123...	28	5.4
39	POLN_GETV (Q5Y389) Nonstructural polyprotein (Polyprotein nsP123...	28	5.4
40	COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor	28	5.4
41	COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemph...	28	7.0
42	BNR1_YEAST (P40450) BNI1-related protein 1	28	7.0
43	THIX_HAEIN (P43787) Thioredoxin-like protein HI1115	28	7.0
44	TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (S...	27	9.2
45	YP96_CAEEL (Q09476) Hypothetical protein C28H8.6 in chromosome III	27	9.2
46	ATPG_RHOBA (Q7UFB6) ATP synthase gamma chain (EC 3.6.3.14) (ATP ...	27	9.2
47	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	27	9.2
48	DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polyme...	27	9.2
49	CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodp...	27	9.2
50	CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor	27	9.2
51	KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C	27	9.2
52	MUC1_YEAST (P08640) Mucin-like protein 1 precursor	27	9.2

>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)|
          Length = 568

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFTPN--TNT 206
           ++G   KT + RPNW   FK+IA NH +  +GVF+CG   +   L+++   ++ +     
Sbjct: 500 ITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGV 559

Query: 205 KFEFHKENF 179
            F ++KENF
Sbjct: 560 HFYYNKENF 568

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>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 569

 Score = 53.9 bits (128), Expect = 9e-08
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQL--RQLSADFTPNTNT 206
           ++G   KT + RPNW + FK IA  H N R+GVF CG   L   L  + +S   +     
Sbjct: 501 ITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGV 560

Query: 205 KFEFHKENF 179
            F F+KENF
Sbjct: 561 HFIFNKENF 569

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>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)|
           (Mitogenic oxidase 2)
          Length = 568

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQL-----SADFTPN 215
           ++G   KT + RPNW + FK+IA NH +  +GVF+CG   L   L+++     SAD    
Sbjct: 500 ITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSAD---P 556

Query: 214 TNTKFEFHKENF 179
               F ++KE+F
Sbjct: 557 RGVHFYYNKESF 568

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>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH|
           mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1)
           (MOX1)
          Length = 563

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT--PNTNT 206
           L+G   KT F RP W + F RIA  H    VGVF CG P L   LR+    ++       
Sbjct: 495 LTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKV 554

Query: 205 KFEFHKENF 179
           +F F+KE F
Sbjct: 555 QFYFNKETF 563

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>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 beta
          Length = 484

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ---LSADFTPNTN 209
           ++G   KT + RPNW + FK IA  H   R+GVF CG   L   L +    ++D +P   
Sbjct: 416 ITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPR-G 474

Query: 208 TKFEFHKENF 179
             F F+KENF
Sbjct: 475 VHFIFNKENF 484

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>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)|
          Length = 568

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT--PNTNT 206
           ++G   K  + RPNW   FK+IA NH +  +GVF+CG   +   L+++   ++       
Sbjct: 500 ITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGV 559

Query: 205 KFEFHKENF 179
            F ++KENF
Sbjct: 560 HFYYNKENF 568

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>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ--LSADFTPNTNT 206
           ++G   KT + RPNW + FK I   H N R+GVF CG   L   L +  +S   +     
Sbjct: 502 ITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGV 561

Query: 205 KFEFHKENF 179
            F F+KENF
Sbjct: 562 HFIFNKENF 570

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>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQ--LSADFTPNTNT 206
           ++G   KT + RPNW + FK I   H N R+GVF CG   L   L +  +S   +     
Sbjct: 502 ITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGV 561

Query: 205 KFEFHKENF 179
            F F+KENF
Sbjct: 562 HFIFNKENF 570

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>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)|
           (Neutrophil cytochrome b 91 kDa polypeptide)
           (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane
           glycoprotein gp91phox) (Cytochrome b(558) beta chain)
           (Cytochrome b558 be
          Length = 570

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQL--RQLSADFTPNTNT 206
           ++G   KT + RPNW + FK IA  H N  +GVF CG   L   L  + +S   +     
Sbjct: 502 ITGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGV 561

Query: 205 KFEFHKENF 179
            F F+KENF
Sbjct: 562 HFIFNKENF 570

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>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH|
           mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1)
           (MOX1)
          Length = 564

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFT--PNTNT 206
           ++G   KT F RP W + F  IA +H    VGVF CG   L   LR+    ++       
Sbjct: 496 VTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKV 555

Query: 205 KFEFHKENF 179
           +F F+KENF
Sbjct: 556 QFYFNKENF 564

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>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)|
          Length = 765

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/67 (32%), Positives = 34/67 (50%)
 Frame = -3

Query: 379 LSGTSVKTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFTPNTNTKF 200
           ++G   +T   RP+W  VF+++A   +  +V VF+CG P L   L+     F       F
Sbjct: 706 ITGLQTRTQPGRPDWSKVFQKVAAEKKG-KVQVFFCGSPALAKVLKGHCEKF------GF 758

Query: 199 EFHKENF 179
            F +ENF
Sbjct: 759 RFFQENF 765

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>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1)
          Length = 1551

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -3

Query: 358  THFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKFEFHKEN 182
            THF RP +   FK +   H   R +GVF CG P +   + +          T F  H EN
Sbjct: 1491 THFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1550

Query: 181  F 179
            F
Sbjct: 1551 F 1551

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>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1551

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -3

Query: 376  SGTSVKTHFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKF 200
            +G    THF RP +   F  +   H   R +GVF CG P +   + +          T F
Sbjct: 1485 TGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHF 1544

Query: 199  EFHKENF 179
              H ENF
Sbjct: 1545 SHHYENF 1551

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>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)|
            (NADPH thyroid oxidase 1) (Blistered cuticle protein 3)
          Length = 1497

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -3

Query: 376  SGTSVKTHFARPNWRSVFKRIAVNHENQ-RVGVFYCGEPVLVAQLRQLSAD 227
            +G   K HF RPN+++ F+ I   H+ Q ++GVF CG   L   + +  AD
Sbjct: 1430 TGLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCAD 1480

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>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1)
            (Long NOX 1)
          Length = 1551

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -3

Query: 358  THFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKFEFHKEN 182
            THF RP +   F  +   H   R +GVF CG P +   + +          T F  H EN
Sbjct: 1491 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1550

Query: 181  F 179
            F
Sbjct: 1551 F 1551

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>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1553

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -3

Query: 358  THFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKFEFHKEN 182
            THF RP +   F  +   H   R +GVF CG P +   + +          T F  H EN
Sbjct: 1493 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1552

Query: 181  F 179
            F
Sbjct: 1553 F 1553

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>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
            (NADH/NADPH thyroid oxidase p138-tox)
          Length = 1545

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = -3

Query: 358  THFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKFEFHKEN 182
            THF RP +   F  +   H   R +GVF CG P +   + +          T F  H EN
Sbjct: 1485 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFVHHYEN 1544

Query: 181  F 179
            F
Sbjct: 1545 F 1545

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>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH|
            oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2)
            (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox)
            (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2)
          Length = 1548

 Score = 35.0 bits (79), Expect = 0.044
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -3

Query: 358  THFARPNWRSVFKRIAVNHENQR-VGVFYCGEPVLVAQLRQLSADFTPNTNTKFEFHKEN 182
            THF RP +   F  +   H   R +GVF CG P +   + +            F  H EN
Sbjct: 1488 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHFMHHYEN 1547

Query: 181  F 179
            F
Sbjct: 1548 F 1548

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>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)|
            (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2)
            (Large NOX 2) (Long NOX 2)
          Length = 1517

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = -3

Query: 376  SGTSVKTHFARPNWRSVFKRIAVNHEN-QRVGVFYCGEPVLVAQLRQLSADFTPNTNTKF 200
            +G    THF RP +      +   H    ++GVF CG P +   + +            F
Sbjct: 1451 TGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRAHF 1510

Query: 199  EFHKENF 179
              H ENF
Sbjct: 1511 VHHYENF 1517

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>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 22/66 (33%), Positives = 31/66 (46%)
 Frame = -1

Query: 366 ASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFTR 187
           +S  T P  T  +SSS S S    S   SST+ S +   +  S   +SP + + S S T 
Sbjct: 257 SSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTS 316

Query: 186 RISNYT 169
             S +T
Sbjct: 317 ISSTFT 322



 Score = 32.0 bits (71), Expect = 0.37
 Identities = 24/67 (35%), Positives = 29/67 (43%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFT 190
           P+S  T   LT  +SSS S S    S   SST+ S     +  S   TSP   + S S T
Sbjct: 228 PSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASST 287

Query: 189 RRISNYT 169
              S  T
Sbjct: 288 STSSYST 294



 Score = 31.2 bits (69), Expect = 0.63
 Identities = 23/67 (34%), Positives = 30/67 (44%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFT 190
           P+S  T P  T  +SSS S S+   S   SST+ S     +  S   TS    + S S T
Sbjct: 193 PSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSST 252

Query: 189 RRISNYT 169
              S+ T
Sbjct: 253 STSSSST 259



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/76 (31%), Positives = 32/76 (42%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFT 190
           P+S  T    T  +SSS S S+   S   SST+ S  L  +  S   TS    + S S T
Sbjct: 200 PSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSST 259

Query: 189 RRISNYTYVCSYNVRT 142
               + T   S +  T
Sbjct: 260 STSPSSTSTSSSSTST 275



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = -1

Query: 366 ASRPTLPGL--TGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSF 193
           +S PT   L  T  + SS S S    S   SST+ S     +  S   TSP   + S S 
Sbjct: 178 SSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSL 237

Query: 192 TRRISNYTYVCSYNVRTCLS 133
           T   S+ T     +  T  S
Sbjct: 238 TSTSSSSTSTSQSSTSTSSS 257



 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFT 190
           P+S  T    T  + SS S S    S    ST+ S  L  S  +   TSP   + S +FT
Sbjct: 263 PSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLTSSSPTLASTSPSSTSISSTFT 322

Query: 189 RRISN 175
              S+
Sbjct: 323 DSTSS 327

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>PACS1_HUMAN (Q6VY07) Phosphofurin acidic cluster sorting protein 1 (PACS-1)|
          Length = 963

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP-----PIPTQ 205
           P  +PT P L    SSS+S S    S+  SST+ S+ +  + GS     P     P P Q
Sbjct: 41  PPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAPVQ 100

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>PACS1_RAT (O88588) Phosphofurin acidic cluster sorting protein 1 (PACS-1)|
          Length = 961

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP-----PIP 211
           P    +PT P L    SSS+S S    S+  SST+ S+ +  + GS     P     P P
Sbjct: 37  PSQPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 96

Query: 210 TQ 205
            Q
Sbjct: 97  VQ 98

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>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1475

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
 Frame = -3

Query: 376  SGTSVKTHFARPNWRSVFKRIAVNHEN-QRVGVFYCGEPVLVAQLRQLSADFTPNTNTK- 203
            +G     HF RP+  S  K +   H    ++GVF CG   L   +  +SA    N   K 
Sbjct: 1407 TGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSV--MSACDEVNKTRKL 1464

Query: 202  --FEFHKENF 179
              F  H ENF
Sbjct: 1465 PYFIHHFENF 1474

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>UBP36_HUMAN (Q9P275) Ubiquitin carboxyl-terminal hydrolase 36 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 36)
           (Ubiquitin-specific-processing protease 36)
           (Deubiquitinating enzyme 36)
          Length = 1121

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 18/61 (29%), Positives = 31/61 (50%)
 Frame = -1

Query: 357 PTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFTRRIS 178
           P L   T E +S+ S    +  AL +  A++L  WR+ G+  +  PP P+  L+   + S
Sbjct: 668 PVLSNTTTEPASTMSPPPAKKLALSAKKASTL--WRATGNDLRPPPPSPSSDLTHPMKTS 725

Query: 177 N 175
           +
Sbjct: 726 H 726

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>KR2_HHV11 (P04290) Probable serine/threonine-protein kinase (EC 2.7.11.1)|
           (Virion protein VMW57)
          Length = 518

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -1

Query: 372 GPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWR-SCGSCRQTSPPIPTQSLS 196
           G + RP+ P L   A S +S  +   S L     A L  WR S  S R+ SP  P  +  
Sbjct: 41  GASGRPSGPSLQDAAVSRSSHGSRHRSGLRERLRAGLSRWRMSRSSHRRASPETPGTAAK 100

Query: 195 FTR 187
             R
Sbjct: 101 LNR 103

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>LZTS2_HUMAN (Q9BRK4) Leucine zipper putative tumor suppressor 2 (Protein|
           LAPSER1)
          Length = 669

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
 Frame = -1

Query: 375 PGPASR-PTLPGLTGEASSSASQSTMRISA------LGSSTAASLFLWRSCGSCRQTSPP 217
           PGPA   PT P  +    SS+S+ST  +        LGS T AS        SC + SPP
Sbjct: 258 PGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLGSGTRAS----PDSSSCGERSPP 313

Query: 216 IP 211
            P
Sbjct: 314 PP 315

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>PACS1_MOUSE (Q8K212) Phosphofurin acidic cluster sorting protein 1 (PACS-1)|
          Length = 961

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSP-----PIP 211
           P    +PT P L    SSS+S S    S+  SST+ S+ +  + GS     P     P P
Sbjct: 37  PPQPQQPTPPKLAQATSSSSSTSAAAASSSSSSTSTSMAVAVASGSAPPGGPGPGRTPAP 96

Query: 210 TQ 205
            Q
Sbjct: 97  VQ 98

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>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic|
           region
          Length = 551

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = -1

Query: 339 TGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLSFTRRISNYTYVC 160
           +  +SSS+S S+     L +S+++S++   S  S   +S   PT S++ T   S+ T   
Sbjct: 251 SSSSSSSSSSSSSSYFTLSTSSSSSIYSSSSYPSFSSSSSSNPTSSITSTSASSSITPAS 310

Query: 159 SYN 151
            Y+
Sbjct: 311 EYS 313

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>Y396_HELPY (O25157) Hypothetical protein HP0396|
          Length = 616

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +2

Query: 242 PQLRHKNR-----LAAVEDPNALILMVDCDALEDASP--VRPGKVGLDA 367
           P LR  N      L      NALI    CDAL+ ASP     GK+G+DA
Sbjct: 400 PNLRDTNAIIEYILENFSKENALISQGVCDALDHASPEYAMGGKLGIDA 448

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>Y396_HELPJ (Q9ZKF3) Hypothetical protein jhp_0985|
          Length = 616

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +2

Query: 242 PQLRHKNR-----LAAVEDPNALILMVDCDALEDASP--VRPGKVGLDA 367
           P LR  N      L      NALI    CDAL+ ASP     GK+G+DA
Sbjct: 400 PNLRDTNAIIEYILENFSKENALISQGVCDALDHASPEYAMGGKLGIDA 448

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>INGR1_MOUSE (P15261) Interferon-gamma receptor alpha chain precursor|
           (IFN-gamma-R1) (CD119 antigen)
          Length = 477

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -1

Query: 378 CPGPASRPTLPGLTGEASSSA-SQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQS 202
           C  P S  T P     A     S+ T  + A GS++A +             SPP PTQ 
Sbjct: 329 CEEPLSTVTAPDSPEAAEQEELSKETKALEAGGSTSAMT-----------PDSPPTPTQR 377

Query: 201 LSFTRRISNYTYVCS 157
            SF+   SN +  CS
Sbjct: 378 RSFSLLSSNQSGPCS 392

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>ADO_MOUSE (O54754) Aldehyde oxidase (EC 1.2.3.1) (Retinal oxidase)|
          Length = 1333

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 8/54 (14%)
 Frame = +3

Query: 135  KGRFLHYSYIHMCN*KFSL*NSNFVLVLGVKSADN--------CRSCATRTGSP 272
            +GR L     H CN   SL  S +V+ +G+   DN        CR  A RT  P
Sbjct: 857  EGRILALDVEHYCNGGCSLDESLWVIEMGLLKLDNAYKFPNLRCRGWACRTNLP 910

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>CID_DROME (P19538) Protein cubitus interruptus|
          Length = 1397

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 361  KTHFARPNWRSVFKRIAVNHENQRVGVFYCGEPVLVAQLRQLSADFTPNTNTKF 200
            K H A P   +V + IA NH  ++  ++Y  + +L       + D  PNT TKF
Sbjct: 1104 KEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILTP---PSNVDIQPNT-TKF 1153

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>PLXA1_HUMAN (Q9UIW2) Plexin-A1 precursor (Semaphorin receptor NOV)|
          Length = 1896

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = -1

Query: 378 CPGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSL 199
           C  P++R   P   G+      +  ++    G   A+  F++ +C S  Q+   +   + 
Sbjct: 617 CRSPSAREVAPITRGQGDQRVVKLYLKSKETGKKFASVDFVFYNC-SVHQSC--LSCVNG 673

Query: 198 SFTRRISNYTYVCSYNVRTC 139
           SF      Y +VC++NV  C
Sbjct: 674 SFPCHWCKYRHVCTHNVADC 693

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>MSH4_MOUSE (Q99MT2) MutS protein homolog 4 (mMsh4)|
          Length = 958

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
 Frame = -1

Query: 366 ASRPTLPGLTGEASSSASQSTMRISALGSS-----------TAASLFLWRSCGSCRQTSP 220
           ASRP+  G   + SSS+S S    SA GSS            A+S  +  S  S R T+ 
Sbjct: 78  ASRPSTEGAMADRSSSSSSSPAPASAPGSSFGNKRSYAIHRAASSFPVGTSSSSARDTTY 137

Query: 219 P 217
           P
Sbjct: 138 P 138

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>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister|
           chromatids)
          Length = 1741

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -1

Query: 369 PASRPTLPGLTGEASSSASQSTMRISALGSST 274
           P S P+LP  T   S+SAS S+   SA GS++
Sbjct: 297 PGSEPSLPPPTSAPSASASTSSQLPSASGSAS 328

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>DGP11_ARATH (Q9LK71) Putative protease Do-like 11, mitochondrial precursor (EC|
           3.4.21.-)
          Length = 565

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 270 ASLFLWRSCGSCRQTSPPIPTQSLSFTRRISNYTYVC 160
           +SLF +RSC +    S P  T +     R+S Y Y+C
Sbjct: 23  SSLFFYRSCNNVLTNSLPTVTTA----GRVSRYGYIC 55

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>POLN_SAGV (Q9JGL0) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
 Frame = -3

Query: 301  ENQRVGVFYCGEPVLVAQL--------RQLSADFTPNTNTKFEFHKENF 179
            E  +V V    EP+  A L        R+L A  TPN +T F+   E+F
Sbjct: 2160 ERPKVQVIQAAEPLATAYLCGIHRELVRRLKAVLTPNIHTLFDMSAEDF 2208

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>POLN_GETV (Q5Y389) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2466

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
 Frame = -3

Query: 301  ENQRVGVFYCGEPVLVAQL--------RQLSADFTPNTNTKFEFHKENF 179
            E  +V V    EP+  A L        R+L A  TPN +T F+   E+F
Sbjct: 2160 ERPKVQVIQAAEPLATAYLCGIHRELVRRLKAVLTPNIHTLFDMSAEDF 2208

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>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 375  PGPASRPTLPGLTGEASSSASQSTMRISA-LGSSTAASLFLWRSCGSCRQ 229
            PGP   P +PGL G   ++       ++A LGS       L   CG C Q
Sbjct: 911  PGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQ 960

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>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 1146

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASL 262
           PGPA  P  PG+ G + +S    +  + ++G S+ + +
Sbjct: 785 PGPAGPPGPPGIPGSSGTSLEDISAYLQSVGYSSISGI 822

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>BNR1_YEAST (P40450) BNI1-related protein 1|
          Length = 1375

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIP-TQSL 199
           P P   P LP      + +       I+A        LF  ++CG+     PP P  +SL
Sbjct: 772 PPPPPPPPLPQSLLTEAEAKPDGVSCIAAPAPPPLPDLFKTKTCGAVPPPPPPPPLPESL 831

Query: 198 SFTRRISNYTYV 163
           S  +  SN+  V
Sbjct: 832 SMNKGPSNHDLV 843

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>THIX_HAEIN (P43787) Thioredoxin-like protein HI1115|
          Length = 167

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 360 RPTLPGLTGEASSSASQ-STMRISALGSSTAASLFLWRS-CGSCRQTSPPI 214
           RP +P    + +    Q +T  + +L  +    L+ W + CG CR TSP I
Sbjct: 29  RPVVPEEINKITLQDLQGNTFSLESLDQNKPTLLYFWGTWCGYCRYTSPAI 79

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>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -1

Query: 357 PTLPGLTGEASSSASQSTMRI---SALGSSTAASLFLWRSCGSCRQTSPPIPTQS 202
           P L  L G+ASSSA+ S+      SA  SS+AA      S  S  ++S   P+ S
Sbjct: 104 PALKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAPSSS 158

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>YP96_CAEEL (Q09476) Hypothetical protein C28H8.6 in chromosome III|
          Length = 256

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 7   SPKCHQFHDLFRNRDLAITSKPVHIK-KTWIIISLPYYDDADHRKAG 144
           SPKC   H    +R +++ +K  HI+  T    + P+ +D  H K G
Sbjct: 75  SPKCQGCHRAITDRCVSVMNKNFHIECFTCAECNQPFGEDGFHEKNG 121

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>ATPG_RHOBA (Q7UFB6) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1|
           sector gamma subunit)
          Length = 296

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = -1

Query: 93  PSFFYMDRFRCYGEISISEQIVKLVAL 13
           P+ F +  F+C+ + ++SEQ+ +++A+
Sbjct: 228 PTSFKVKLFKCFLDAAVSEQVARMIAM 254

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -1

Query: 375  PGPASRPTLPGLTGEASSSASQSTMRISAL-GSSTAASLFLWRSCGS 238
            PGP S+P    L    +S  S+ + ++    GSSTA     W   GS
Sbjct: 1858 PGPLSQPQASALATVKASIISELSSKLQQFGGSSTAGGALPWARGGS 1904

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>DPOL_HBVWJ (P17394) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 843

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
 Frame = -1

Query: 357 PTLPGLTGEAS-SSASQSTMRISALGSSTAASLFLWR---SCGSCRQTSPPIPTQSLSFT 190
           P  PG+   +S     QS +R S LG          R     GS R    P P  ++   
Sbjct: 199 PQSPGILPRSSVGPCIQSQLRKSRLGPQPTQGQLAGRPQGGSGSIRARIHPSPWGTVGVE 258

Query: 189 RRISNYTYVCSYNVRTCLSMVCV 121
              S +T++C+ +  +CL    V
Sbjct: 259 PSGSGHTHICASSSSSCLHQSAV 281

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>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 375  PGPASRPTLPGLTGEASSSASQST 304
            PGPA    LPGL G+   S S +T
Sbjct: 1417 PGPAGSDGLPGLKGKRGDSGSPAT 1440

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>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 375  PGPASRPTLPGLTGEASSSASQSTMRISAL 286
            PGPA  P LPG+ GE+     Q    +  L
Sbjct: 1344 PGPAGLPGLPGMKGESGLPGPQGPAGLPGL 1373

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>KIF3C_MOUSE (O35066) Kinesin-like protein KIF3C|
          Length = 796

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
 Frame = -1

Query: 372 GPASRPTLPGLTGEASSSASQST-----------MRISALGSSTAA 268
           GPA++PT  G +G  S+S S S+           + +SALG+  AA
Sbjct: 263 GPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAA 308

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>MUC1_YEAST (P08640) Mucin-like protein 1 precursor|
          Length = 1367

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLS 196
           P P+S  T        SS+   S+  +    SST  S     +  +   +S P+PT S S
Sbjct: 528 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSTPVTSSTTESSSAPVPTPSSS 587

Query: 195 FTRRIS 178
            T   S
Sbjct: 588 TTESSS 593



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -1

Query: 375 PGPASRPTLPGLTGEASSSASQSTMRISALGSSTAASLFLWRSCGSCRQTSPPIPTQSLS 196
           P P+S  T        SS+   S+  +    SST  S     +  +   +S P+PT S S
Sbjct: 459 PTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSS 518

Query: 195 FTRRIS 178
            T   S
Sbjct: 519 TTESSS 524


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,794,090
Number of Sequences: 219361
Number of extensions: 1000344
Number of successful extensions: 3268
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3254
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result