ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (... 446 e-122
2emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein 149 5e-33
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
4dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
5dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRN... 54 2e-04
6emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82 54 2e-04
7dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
8emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 48 0.013
9emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70 48 0.013
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.013
11dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.013
12dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.013
13dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.013
14gb|BT016606.1| Zea mays clone Contig439 mRNA sequence 46 0.053
15gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, com... 46 0.053
16gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds 46 0.053
17gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence 46 0.053
18gb|AY110769.1| Zea mays CL1264_4 mRNA sequence 46 0.053
19gb|AY105939.1| Zea mays PCO150588 mRNA sequence 46 0.053
20gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds 44 0.21
21gb|AY103538.1| Zea mays PCO150589 mRNA sequence 44 0.21
22gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hs... 44 0.21
23ref|XM_483191.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.83
24gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.83
25gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.83
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.83
27gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosom... 42 0.83
28gb|AC102133.27| Mus musculus chromosome 1, clone RP23-241J21, co... 42 0.83
29emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 42 0.83
30gb|AC162170.5| Mus musculus chromosome 1, clone RP23-240G10, com... 42 0.83
31dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
32dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.83
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.83
34dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock pro... 42 0.83
35dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to he... 42 0.83
36dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
37dbj|AK119710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
38dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
39dbj|AK119255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
40emb|Z15024.1|OSHSP82MR O.sativa (Taichung Native One) hsp82 mRNA... 42 0.83
41dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
42dbj|AK065431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.83
43emb|BX510920.6| Zebrafish DNA sequence from clone DKEY-30J22 in ... 42 0.83
44gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.83
45gb|AC149284.5| Mus musculus BAC clone RP23-136E9 from 18, comple... 42 0.83
46gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.83
47gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence 40 3.3
48gb|DQ059998.1| Volvox carteri f. nagariensis heat-shock inducibl... 40 3.3
49emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chr... 40 3.3
50emb|AL645760.15| Mouse DNA sequence from clone DN-262D11 on chro... 40 3.3
51emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 i... 40 3.3
52emb|CR759734.3| Zebrafish DNA sequence from clone CH211-140L7 in... 40 3.3
53dbj|AK090979.1| Homo sapiens cDNA FLJ33660 fis, clone BRAMY2026395 40 3.3
54emb|AL606744.30| Mouse DNA sequence from clone RP23-267O21 on ch... 40 3.3
55gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, r... 40 3.3
56gb|AC092837.5| Homo sapiens BAC clone RP11-137J9 from 2, complet... 40 3.3
57dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 3.3
58dbj|AK098818.1| Homo sapiens cDNA FLJ25952 fis, clone SYN00911 40 3.3
59dbj|AK110411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.3
60emb|BX322665.5| Zebrafish DNA sequence from clone DKEY-183N20 in... 40 3.3
61emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in ... 40 3.3
62gb|AY109427.1| Zea mays CL1264_2 mRNA sequence 40 3.3
63gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52... 40 3.3
64gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRN... 40 3.3
65dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 3.3
66emb|AL833626.1|HSM804939 Homo sapiens mRNA; cDNA DKFZp686M1273 (... 40 3.3
67gb|BC037336.1| Homo sapiens zinc finger, DHHC-type containing 20... 40 3.3
68gb|BC036691.1| Homo sapiens zinc finger, DHHC-type containing 20... 40 3.3 
>gb|AY325266.1| Hordeum vulgare cytosolic heat shock protein 90 (HSP90) mRNA,
            complete cds
          Length = 2553

 Score =  446 bits (225), Expect = e-122
 Identities = 246/253 (97%)
 Strand = Plus / Minus

                                                                        
Query: 2    gaaagcaataagcagggaatatagaaaaaatatagctaacatatagtagaaccaacaata 61
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2402 gaaagcaataagcagggaatatagaagaaatatagctaacatatagtagaaccaacaata 2343

                                                                        
Query: 62   accgaactgttccacgagtaccacaaataagctaaccgcgcttaaggttgggccagccaa 121
            ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 2342 accgaactgttccacgagtaccacaaataagctaaccgcgcttaatgtttggccagccaa 2283

                                                                        
Query: 122  aagacaaaaccgatacagttaaaacgggccaaaaccatccaacgacgacactaagataaa 181
            |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 2282 aagacaaaaccgatacagctaagacgtgccaaaaccatccaacgacgacactaagataaa 2223

                                                                        
Query: 182  agcaactagacggggcagggcatggacatacgacgacgcgcagccttggcgcttagtcga 241
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2222 agcaactagacggtgcagggcatggacatacgacgacgcgcagccttggcgcttagtcga 2163

                         
Query: 242  cctcctccatctt 254
            |||||||||||||
Sbjct: 2162 cctcctccatctt 2150
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>emb|X98582.1|TAX98582 T.aestivum mRNA for HSP80-2 protein
          Length = 2378

 Score =  149 bits (75), Expect = 5e-33
 Identities = 104/111 (93%), Gaps = 2/111 (1%)
 Strand = Plus / Minus

                                                                        
Query: 29   aaatatagctaacatatagtagaaccaacaataaccgaactgttccacgagtaccacaaa 88
            |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2373 aaatatagctaacatataatagaaccaacaataac-gaactgttccacgagtaccacaaa 2315

                                                               
Query: 89   taagctaaccgcgcttaaggttgggccagccaaaagacaaaaccgatacag 139
             | |||| |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 2314 ca-gctagccgcgcttaatgtttggccagccaaaagacaaaaccgatacag 2265



 Score =  113 bits (57), Expect = 3e-22
 Identities = 91/101 (90%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                        
Query: 155  accatccaacgacgacactaa-gataaaagcaactagacggggcagggcatggacatacg 213
            ||||||||||| ||||||||| ||||||| ||||||| ||| |||||||||| |||| ||
Sbjct: 2262 accatccaacgtcgacactaaagataaaaacaactaggcggtgcagggcatgaacatccg 2203

                                                     
Query: 214  acgacgcgcagccttggcgcttagtcgacctcctccatctt 254
            |||||  |||| |||||||||||||||||||||||||||||
Sbjct: 2202 acgacaggcagacttggcgcttagtcgacctcctccatctt 2162
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 228      tggcgcttagtcgacctcctccatctt 254
                |||||||||||||||||||||||||||
Sbjct: 18460303 tggcgcttagtcgacctcctccatctt 18460329



 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 234      ttagtcgacctcctccatctt 254
                |||||||||||||||||||||
Sbjct: 18482614 ttagtcgacctcctccatctt 18482634



 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 234      ttagtcgacctcctccatctt 254
                |||||||||||||||||||||
Sbjct: 18471155 ttagtcgacctcctccatctt 18471175
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 228    tggcgcttagtcgacctcctccatctt 254
              |||||||||||||||||||||||||||
Sbjct: 122177 tggcgcttagtcgacctcctccatctt 122203



 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    ttagtcgacctcctccatctt 254
              |||||||||||||||||||||
Sbjct: 144488 ttagtcgacctcctccatctt 144508



 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 234    ttagtcgacctcctccatctt 254
              |||||||||||||||||||||
Sbjct: 133029 ttagtcgacctcctccatctt 133049
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>dbj|AB111810.1| Oryza sativa (japonica cultivar-group) Hsp90 mRNA for heat shock
            protein 90, complete cds
          Length = 2408

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 228  tggcgcttagtcgacctcctccatctt 254
            |||||||||||||||||||||||||||
Sbjct: 2211 tggcgcttagtcgacctcctccatctt 2185
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>emb|Z15018.1|OSHSP82G O.sativa hsp82 gene for heat shock protein 82
          Length = 704

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 228 tggcgcttagtcgacctcctccatctt 254
           |||||||||||||||||||||||||||
Sbjct: 271 tggcgcttagtcgacctcctccatctt 245
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>dbj|AK064780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B06, full
            insert sequence
          Length = 2410

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 228  tggcgcttagtcgacctcctccatctt 254
            |||||||||||||||||||||||||||
Sbjct: 2232 tggcgcttagtcgacctcctccatctt 2206
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>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82
          Length = 5310

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 231  cgcttagtcgacctcctccatctt 254
            ||||||||||||||||||||||||
Sbjct: 4934 cgcttagtcgacctcctccatctt 4911
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>emb|X67711.2|OSHSC70A O.sativa hsp70 gene for heat shock protein 70
          Length = 4791

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 227  ttggcgcttagtcgacctcctccatctt 254
            |||||||||||||||||||||| |||||
Sbjct: 4581 ttggcgcttagtcgacctcctcgatctt 4554
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 231      cgcttagtcgacctcctccatctt 254
                ||||||||||||||||||||||||
Sbjct: 24712197 cgcttagtcgacctcctccatctt 24712220
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 231   cgcttagtcgacctcctccatctt 254
             ||||||||||||||||||||||||
Sbjct: 12998 cgcttagtcgacctcctccatctt 13021
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_A06
          Length = 92836

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 231   cgcttagtcgacctcctccatctt 254
             ||||||||||||||||||||||||
Sbjct: 84501 cgcttagtcgacctcctccatctt 84524
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>dbj|AK102426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F17, full
            insert sequence
          Length = 3149

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 231  cgcttagtcgacctcctccatctt 254
            ||||||||||||||||||||||||
Sbjct: 2912 cgcttagtcgacctcctccatctt 2889
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>gb|BT016606.1| Zea mays clone Contig439 mRNA sequence
          Length = 867

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 232 gcttagtcgacctcctccatctt 254
           |||||||||||||||||||||||
Sbjct: 536 gcttagtcgacctcctccatctt 514
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>gb|AY344115.1| Toxoplasma gondii heat shock protein 90 mRNA, complete cds
          Length = 2933

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 232  gcttagtcgacctcctccatctt 254
            |||||||||||||||||||||||
Sbjct: 2261 gcttagtcgacctcctccatctt 2239
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>gb|AY292370.1| Toxoplasma gondii HSP90 mRNA, complete cds
          Length = 2966

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 232  gcttagtcgacctcctccatctt 254
            |||||||||||||||||||||||
Sbjct: 2279 gcttagtcgacctcctccatctt 2257
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>gb|BT024184.1| Zea mays clone EL01N0315D01 mRNA sequence
          Length = 1740

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 232  gcttagtcgacctcctccatctt 254
            |||||||||||||||||||||||
Sbjct: 1480 gcttagtcgacctcctccatctt 1458
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>gb|AY110769.1| Zea mays CL1264_4 mRNA sequence
          Length = 864

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 232 gcttagtcgacctcctccatctt 254
           |||||||||||||||||||||||
Sbjct: 534 gcttagtcgacctcctccatctt 512
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>gb|AY105939.1| Zea mays PCO150588 mRNA sequence
          Length = 1101

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 232 gcttagtcgacctcctccatctt 254
           |||||||||||||||||||||||
Sbjct: 896 gcttagtcgacctcctccatctt 874
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>gb|AF421541.1| Crypthecodinium cohnii Hsp90 mRNA, complete cds
          Length = 2540

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 233  cttagtcgacctcctccatctt 254
            ||||||||||||||||||||||
Sbjct: 2196 cttagtcgacctcctccatctt 2175
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>gb|AY103538.1| Zea mays PCO150589 mRNA sequence
          Length = 2534

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 233  cttagtcgacctcctccatctt 254
            ||||||||||||||||||||||
Sbjct: 2280 cttagtcgacctcctccatctt 2259
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>gb|AF042329.1|AF042329 Eimeria tenella heat shock protein 90 (hsp90) mRNA, complete cds
          Length = 2505

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 233  cttagtcgacctcctccatctt 254
            ||||||||||||||||||||||
Sbjct: 2253 cttagtcgacctcctccatctt 2232
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>ref|XM_483191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2100

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  ttagtcgacctcctccatctt 254
            |||||||||||||||||||||
Sbjct: 2100 ttagtcgacctcctccatctt 2080
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 234   ttagtcgacctcctccatctt 254
             |||||||||||||||||||||
Sbjct: 10620 ttagtcgacctcctccatctt 10640
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 230    gcgcttagtcgacctcctccatctt 254
              ||||||||||||||||||| |||||
Sbjct: 135642 gcgcttagtcgacctcctcgatctt 135618
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 10       taagcagggaatatagaaaaa 30
                |||||||||||||||||||||
Sbjct: 11966155 taagcagggaatatagaaaaa 11966135
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>gb|AC116597.3| Mus musculus BAC clone RP24-409C23 from chromosome 18, complete
             sequence
          Length = 198519

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   cagccaaaagacaaaaccgat 135
             |||||||||||||||||||||
Sbjct: 35689 cagccaaaagacaaaaccgat 35709
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>gb|AC102133.27| Mus musculus chromosome 1, clone RP23-241J21, complete sequence
          Length = 203349

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 22    atagaaaaaatatagctaacatata 46
             |||||||| ||||||||||||||||
Sbjct: 66889 atagaaaagatatagctaacatata 66865
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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 5       agcaataagcagggaatatagaaaa 29
               |||||||||||| ||||||||||||
Sbjct: 1309513 agcaataagcagagaatatagaaaa 1309537
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>gb|AC162170.5| Mus musculus chromosome 1, clone RP23-240G10, complete sequence
          Length = 159806

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 22    atagaaaaaatatagctaacatata 46
             |||||||| ||||||||||||||||
Sbjct: 18815 atagaaaagatatagctaacatata 18839
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>dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G11, full
            insert sequence
          Length = 2440

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  ttagtcgacctcctccatctt 254
            |||||||||||||||||||||
Sbjct: 2224 ttagtcgacctcctccatctt 2204
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 230      gcgcttagtcgacctcctccatctt 254
                ||||||||||||||||||| |||||
Sbjct: 28177087 gcgcttagtcgacctcctcgatctt 28177063
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 10       taagcagggaatatagaaaaa 30
                |||||||||||||||||||||
Sbjct: 11962918 taagcagggaatatagaaaaa 11962898
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>dbj|D21284.1|RICAD167 Oryza sativa AD167 mRNA for heat shock protein 82, partial sequence
          Length = 474

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 ttagtcgacctcctccatctt 254
           |||||||||||||||||||||
Sbjct: 270 ttagtcgacctcctccatctt 250
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>dbj|D29709.1|RICYK21 Oryza sativa mRNA, partial homologous to heat shock protein 82 gene
          Length = 371

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 ttagtcgacctcctccatctt 254
           |||||||||||||||||||||
Sbjct: 198 ttagtcgacctcctccatctt 178
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>dbj|AK121906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105K15, full
            insert sequence
          Length = 1278

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  ttagtcgacctcctccatctt 254
            |||||||||||||||||||||
Sbjct: 1064 ttagtcgacctcctccatctt 1044
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>dbj|AK119710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-E11, full
           insert sequence
          Length = 529

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 230 gcgcttagtcgacctcctccatctt 254
           ||||||||||||||||||| |||||
Sbjct: 318 gcgcttagtcgacctcctcgatctt 294
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>dbj|AK119663.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B04, full
            insert sequence
          Length = 1538

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 234  ttagtcgacctcctccatctt 254
            |||||||||||||||||||||
Sbjct: 1355 ttagtcgacctcctccatctt 1335
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>dbj|AK119255.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H02, full
            insert sequence
          Length = 2311

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 230  gcgcttagtcgacctcctccatctt 254
            ||||||||||||||||||| |||||
Sbjct: 2128 gcgcttagtcgacctcctcgatctt 2104
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>emb|Z15024.1|OSHSP82MR O.sativa (Taichung Native One) hsp82 mRNA for heat shock protein 82
          Length = 368

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 ttagtcgacctcctccatctt 254
           |||||||||||||||||||||
Sbjct: 220 ttagtcgacctcctccatctt 200
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>dbj|AK110745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-F12, full
            insert sequence
          Length = 2441

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 231  cgcttagtcgacctcctccat 251
            |||||||||||||||||||||
Sbjct: 2237 cgcttagtcgacctcctccat 2217
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>dbj|AK065431.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021C17, full
            insert sequence
          Length = 2380

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 230  gcgcttagtcgacctcctccatctt 254
            ||||||||||||||||||| |||||
Sbjct: 2026 gcgcttagtcgacctcctcgatctt 2002
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>emb|BX510920.6| Zebrafish DNA sequence from clone DKEY-30J22 in linkage group 20,
              complete sequence
          Length = 220240

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     gaatatagaaaaaatatagct 38
              |||||||||||||||||||||
Sbjct: 100595 gaatatagaaaaaatatagct 100575
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 230      gcgcttagtcgacctcctccatctt 254
                ||||||||||||||||||| |||||
Sbjct: 28161965 gcgcttagtcgacctcctcgatctt 28161941
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>gb|AC149284.5| Mus musculus BAC clone RP23-136E9 from 18, complete sequence
          Length = 204223

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    cagccaaaagacaaaaccgat 135
              |||||||||||||||||||||
Sbjct: 112682 cagccaaaagacaaaaccgat 112702
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>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0014I10, complete sequence
          Length = 113946

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    taagcagggaatatagaaaaa 30
             |||||||||||||||||||||
Sbjct: 67417 taagcagggaatatagaaaaa 67397
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>gb|BT018733.1| Zea mays clone EL01N0520C02.d mRNA sequence
          Length = 2179

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  tagtcgacctcctccatctt 254
            ||||||||||||||||||||
Sbjct: 2033 tagtcgacctcctccatctt 2014
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>gb|DQ059998.1| Volvox carteri f. nagariensis heat-shock inducible Hsp70 (hsp70A)
            gene, complete cds
          Length = 6449

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 231  cgcttagtcgacctcctccatctt 254
            |||||||||||||||||| |||||
Sbjct: 5697 cgcttagtcgacctcctcgatctt 5674
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>emb|AL136219.17| Human DNA sequence from clone RP11-149B7 on chromosome 13 Contains a
             glyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH)
             pseudogene, 2 novel genes, a H2B histone family, member H
             (H2BFH)(H2B.h, H2B/h, dJ221C16.8) pseudogene, the 3' end
             of the EFHA1 gene for EF hand domain family, member A1 and
             three CpG islands, complete sequence
          Length = 167830

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   aggttgggccagccaaaagacaaa 129
             ||||| ||||||||||||||||||
Sbjct: 17924 aggttaggccagccaaaagacaaa 17947
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>emb|AL645760.15| Mouse DNA sequence from clone DN-262D11 on chromosome 3 Contains the 5'
             end of the Man1b gene for mannosidase 1 beta, a pseudogene
             similar to arylsulfatase A (Arsa) and a CpG island,
             complete sequence
          Length = 135825

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatatagaaaaaatatagct 38
             ||||||||||||||||||||
Sbjct: 74042 aatatagaaaaaatatagct 74061
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>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20
            Contains the gene for a novel protein similar to
            vertebrate delta-like 4 (Drosophila) (DLL4), the vps18
            gene for vacuolar protein sorting protein 18, the gene
            for a novel protein containing an SNF2 family N-terminal
            domain and a Helicase conserved C-terminal domain, the
            gene for a novel protein similar to vertebrate ras
            homolog gene family, member V (RHOV), the gene for a
            novel protein containing a ChaC-like protein domain and
            three CpG islands, complete sequence
          Length = 170125

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatatagaaaaaatatagct 38
            ||||||||||||||||||||
Sbjct: 2162 aatatagaaaaaatatagct 2181
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>emb|CR759734.3| Zebrafish DNA sequence from clone CH211-140L7 in linkage group 20,
              complete sequence
          Length = 185855

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aatatagaaaaaatatagct 38
              ||||||||||||||||||||
Sbjct: 137594 aatatagaaaaaatatagct 137575
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>dbj|AK090979.1| Homo sapiens cDNA FLJ33660 fis, clone BRAMY2026395
          Length = 2182

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  aggttgggccagccaaaagacaaa 129
            ||||| ||||||||||||||||||
Sbjct: 2099 aggttaggccagccaaaagacaaa 2076
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>emb|AL606744.30| Mouse DNA sequence from clone RP23-267O21 on chromosome 3, complete
             sequence
          Length = 185867

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    aatatagaaaaaatatagct 38
             ||||||||||||||||||||
Sbjct: 43213 aatatagaaaaaatatagct 43232
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>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone
             BACR37K07, complete sequence
          Length = 157722

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 8     aataagcagggaatatagaaaaaatata 35
             ||||||||||||| || |||||||||||
Sbjct: 56343 aataagcagggaaaatggaaaaaatata 56316
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>gb|AC092837.5| Homo sapiens BAC clone RP11-137J9 from 2, complete sequence
          Length = 147820

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     atagaaaaaatatagctaac 41
              ||||||||||||||||||||
Sbjct: 144496 atagaaaaaatatagctaac 144477
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     gaatatagaaaaaatatagctaac 41
              |||||||||||||| |||||||||
Sbjct: 657856 gaatatagaaaaaaaatagctaac 657879
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>dbj|AK098818.1| Homo sapiens cDNA FLJ25952 fis, clone SYN00911
          Length = 2146

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  aggttgggccagccaaaagacaaa 129
            ||||| ||||||||||||||||||
Sbjct: 2063 aggttaggccagccaaaagacaaa 2040
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>dbj|AK110411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H01, full
            insert sequence
          Length = 2819

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  gcttagtcgacctcctccat 251
            ||||||||||||||||||||
Sbjct: 2200 gcttagtcgacctcctccat 2181
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>emb|BX322665.5| Zebrafish DNA sequence from clone DKEY-183N20 in linkage group 20,
             complete sequence
          Length = 192437

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatagaaaaaatatagctaa 40
             ||||||||||||||||||||
Sbjct: 65360 tatagaaaaaatatagctaa 65379
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>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20,
            complete sequence
          Length = 223182

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   aatatagaaaaaatatagct 38
            ||||||||||||||||||||
Sbjct: 9433 aatatagaaaaaatatagct 9452
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>gb|AY109427.1| Zea mays CL1264_2 mRNA sequence
          Length = 1267

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  tagtcgacctcctccatctt 254
            ||||||||||||||||||||
Sbjct: 1016 tagtcgacctcctccatctt 997
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>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete
             sequence
          Length = 236144

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 8     aataagcagggaatatagaaaaaatata 35
             ||||||||||||| || |||||||||||
Sbjct: 63686 aataagcagggaaaatggaaaaaatata 63659
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>gb|U55859.1|TAU55859 Triticum aestivum heat shock protein 80 mRNA, complete cds
          Length = 2397

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 235  tagtcgacctcctccatctt 254
            ||||||||||||||||||||
Sbjct: 2211 tagtcgacctcctccatctt 2192
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>dbj|AP002371.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-183A22, complete
              sequence
          Length = 159441

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gggccagccaaaagacaaaa 130
              ||||||||||||||||||||
Sbjct: 113823 gggccagccaaaagacaaaa 113804
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>emb|AL833626.1|HSM804939 Homo sapiens mRNA; cDNA DKFZp686M1273 (from clone DKFZp686M1273)
          Length = 3365

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 106  aggttgggccagccaaaagacaaa 129
            ||||| ||||||||||||||||||
Sbjct: 3259 aggttaggccagccaaaagacaaa 3236
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>gb|BC037336.1| Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone
           IMAGE:5264921)
          Length = 767

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 aggttgggccagccaaaagacaaa 129
           ||||| ||||||||||||||||||
Sbjct: 628 aggttaggccagccaaaagacaaa 605
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>gb|BC036691.1| Homo sapiens zinc finger, DHHC-type containing 20, mRNA (cDNA clone
           IMAGE:5261439)
          Length = 767

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 106 aggttgggccagccaaaagacaaa 129
           ||||| ||||||||||||||||||
Sbjct: 628 aggttaggccagccaaaagacaaa 605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,205,986
Number of Sequences: 3902068
Number of extensions: 2205986
Number of successful extensions: 45035
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44833
Number of HSP's gapped (non-prelim): 199
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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