ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EGFL9_MOUSE (Q8K1E3) EGF-like domain-containing protein 9 precur... 28 5.8
2YMS5_CAEEL (P34501) Hypothetical protein K03H1.5 precursor 27 9.9

>EGFL9_MOUSE (Q8K1E3) EGF-like domain-containing protein 9 precursor (Multiple|
           EGF-like domain protein 9) (Endothelial cell-specific
           protein S-1)
          Length = 382

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 313 GSLPDCVMFDSLALVLRDWRRGLC 242
           GSL   ++  ++ L LR WRRG+C
Sbjct: 313 GSLTAALVLATVLLTLRAWRRGIC 336



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>YMS5_CAEEL (P34501) Hypothetical protein K03H1.5 precursor|
          Length = 1385

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 34   PPFVEKQCEPDELRCSSIHRPQSEQRC 114
            PP     C P E   SS++ P+ ++RC
Sbjct: 1005 PPSYNTTCRPGESLSSSLNAPRGQRRC 1031


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,921,643
Number of Sequences: 219361
Number of extensions: 674023
Number of successful extensions: 1611
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 80,573,946
effective HSP length: 80
effective length of database: 63,025,066
effective search space used: 1512601584
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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