>SYL1_SULSO (P58176) Leucyl-tRNA synthetase 1 (EC 6.1.1.4) (Leucine--tRNA|
           ligase 1) (LeuRS 1)
          Length = 934

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/94 (23%), Positives = 45/94 (47%)
 Frame = +1

Query: 124 ISKRKVSKNLPTIPHTLRSTFAYHL*VSTFKVLIKMTSAKAQLTNLEERISRAHPVADIL 303
           +  RK+SK+L  I +TL              V I +TS    L +L+   +  +P+A+ L
Sbjct: 612 VGGRKMSKSLRNI-YTLSKAIKEF---GVDPVRIALTSTSDLLQDLDFNENLVNPIAEQL 667

Query: 304 KDLHCILGRVIQSEIQVEISSRSPDWTFSSTRRV 405
           K ++ ++ R++    +++    + +W  S  R +
Sbjct: 668 KKIYDLIDRLLSINTEIKELRTADEWISSKVRDI 701

>YLAJ_BACSU (O07634) Hypothetical lipoprotein ylaJ precursor|
          Length = 209

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 217 VLIKMTSAKAQLTNLEERISRAHPVADILKDLHCILGRVI 336
           V+I      ++L  +   IS  HPV  IL +L  I+GRV+
Sbjct: 121 VVIADPDTVSRLREMSREISEGHPVTGILDELAAIVGRVL 160

>LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell lineage protein|
            13)
          Length = 2248

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +3

Query: 117  WCNFKKKSEQKFADYTTHFEIHICLPL-ISFNIQGTNQDDISQSAAHQLGGENFQSTSCC 293
            WC+ + +S  +F D+ T F  H C     +F+ Q T +  +      ++ G    +T C 
Sbjct: 963  WCDREYESLNQFVDHLTRFHTHPCPSCGKAFSSQNTRRTHVCSRLFAEIKGRG--ATLCG 1020

Query: 294  RYPQGSPLHSWE 329
            + P    +H  E
Sbjct: 1021 QCPSCPEIHQVE 1032

>VAMPL_ARATH (Q84WF5) Probable VAMP-like protein At1g33485|
          Length = 255

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +3

Query: 180 HICLPLISFNIQGTNQDDISQSAAHQLGGENFQ 278
           H CLPL S +I G  Q   S S A  LG  N Q
Sbjct: 130 HTCLPLSSPSIDGAEQSYASNSKAPLLGRSNKQ 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,973,979
Number of Sequences: 219361
Number of extensions: 1446993
Number of successful extensions: 3443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3443
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)