Clone Name | rbastl42h06 |
---|---|
Clone Library Name | barley_pub |
>E1BL_ADECR (Q96679) E1B protein, large T-antigen (Early E1B 55 kDa protein)| Length = 444 Score = 30.4 bits (67), Expect = 2.3 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Frame = -2 Query: 273 SHGVKRQLWFCYWKRGFGVPLFTHFAATSCT----RAGICLYMGSRKVV*CFCLCSIHVA 106 SH + + C G G +HF AT+CT +C G+ V L +IH A Sbjct: 268 SHSMFKDCACCIMLGGQGTIAHSHFMATTCTDTPMNLQLCTCEGNGSHV--VPLGNIHFA 325 Query: 105 *NSRTPFSPRFNRSSIVCILKF*SLNTNIFY 13 N P+ P FN + +V + + +F+ Sbjct: 326 SNREAPW-PTFNANVLVRVRLYMGRRRGVFH 355
>BIO5_YEAST (P53744) 7-keto 8-aminopelargonic acid transported (KAPA| transporter) Length = 561 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = -2 Query: 285 YKVSSHGVKRQLWFCYWKRGFGVPLFTHFAATSCTRAGICLYMGS 151 YK S G K GF PL+ HF + C C++MGS Sbjct: 408 YKEGSLGNKSLKKLAVLTPGFKSPLYAHFLSQICVTIIGCIFMGS 452
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 113 WILHRQKHYTTLRLPMYKHIPAL---VQEVAAKCVNNGTPKPRF 235 W+ + HY TL + + + L V E+ ++ NNG PKP F Sbjct: 381 WMRYYSAHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPKPNF 424
>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 113 WILHRQKHYTTLRLPMYKHIPAL---VQEVAAKCVNNGTPKPRF 235 W+ + HY TL + + + L V E+ ++ NNG PKP F Sbjct: 381 WMRYYSAHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPKPNF 424
>E1BL_ADECC (Q65943) E1B protein, large T-antigen (Early E1B 55 kDa protein)| Length = 444 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Frame = -2 Query: 273 SHGVKRQLWFCYWKRGFGVPLFTHFAATSCT----RAGICLYMGSRKVV*CFCLCSIHVA 106 SH + + C G G +HF AT+CT +C G+ V L +IH A Sbjct: 268 SHSMFKDCACCIMFGGQGTIAHSHFMATTCTDTPMNLQLCTCEGNGSHV--VPLGNIHFA 325 Query: 105 *NSRTPFSPRFNRSSIVCILKF*SLNTNIFY 13 N P+ P FN + +V + + +F+ Sbjct: 326 SNREAPW-PTFNANVLVRVRLYMGRRRGVFH 355
>LSHB_TRIVU (O46482) Lutropin beta chain precursor (Luteinizing hormone beta| subunit) (LSH-beta) (LSH-B) (LH-B) Length = 141 Score = 25.8 bits (55), Expect(2) = 3.7 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 3/23 (13%) Frame = -3 Query: 215 HCSHILQLLPA---PGPEYVCTW 156 +C ++++LPA PGP+ VCT+ Sbjct: 58 YCPSMVRVLPAALPPGPQLVCTY 80 Score = 22.7 bits (47), Expect(2) = 3.7 Identities = 9/12 (75%), Positives = 10/12 (83%) Frame = -1 Query: 250 LVLLLEAGFWGA 215 L+LLLE G WGA Sbjct: 12 LLLLLEGGSWGA 23
>GPTC3_HUMAN (Q96I76) G patch domain-containing protein 3| Length = 525 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 299 TVEKYTKFLLMESNDSSGFAIGSGVLGCHCSHILQLLPAPGPEYVC 162 T E++TK + + + G+A G G LGC CS + + L + G C Sbjct: 405 TFERHTKGIGRKVMERQGWAEGQG-LGCRCSGVPEALDSDGQHPRC 449
>NRDC_PONPY (Q5R4H6) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1152 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 113 WILHRQKHYTTLRLPMYKHIPAL---VQEVAAKCVNNGTPKPRF 235 W+ + HY TL + + + L V E+ ++ NNG P+P F Sbjct: 371 WLRYYSAHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPRPNF 414
>NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1150 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 113 WILHRQKHYTTLRLPMYKHIPAL---VQEVAAKCVNNGTPKPRF 235 W+ + HY TL + + + L V E+ ++ NNG P+P F Sbjct: 369 WMRYYSSHYMTLVVQSKETLDTLEKWVTEIFSQIPNNGLPRPNF 412
>YNC9_CAEEL (P34542) Hypothetical protein R05D3.9 precursor| Length = 646 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 248 GFAIGSGVLGCHCSHILQLLPAPGP 174 GF GV+ CHC H++ + P PGP Sbjct: 19 GFVAFIGVVRCHCPHMMGVKP-PGP 42
>AMY2_SALTY (P26613) Cytoplasmic alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 494 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/57 (31%), Positives = 25/57 (43%) Frame = +2 Query: 65 DLLNLGENGVLEF*ATWILHRQKHYTTLRLPMYKHIPALVQEVAAKCVNNGTPKPRF 235 D N +++ A W++ Q H RL KHIPA + + V PKP F Sbjct: 206 DFRNHAVTEEIKYWARWVME-QTHCDGFRLDAVKHIPAWFYKEWIEHVQAVAPKPLF 261 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,863,037 Number of Sequences: 219361 Number of extensions: 1334669 Number of successful extensions: 3130 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3074 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3130 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)