ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on ch... 48 0.026
2emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 48 0.026
3gb|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y,... 48 0.026
4gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thalian... 46 0.10
5ref|XM_949082.1| Theileria annulata strain Ankara hypothetical p... 44 0.41
6ref|XM_949084.1| Theileria annulata strain Ankara hypothetical p... 44 0.41
7emb|Z82206.1|HS370M22 Human DNA sequence from clone RP3-370M22 o... 44 0.41
8emb|AJ291830.1|TAN291830 Theileria annulata TashAT3 gene 44 0.41
9emb|AJ291829.1|TAN291829 Theileria annulata TashAT1 gene 44 0.41
10gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 42 1.6
11emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, c... 42 1.6
12gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, comple... 42 1.6
13gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q... 40 6.3
14emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, compl... 40 6.3
15gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete... 40 6.3
16gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete... 40 6.3
17gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete s... 40 6.3
18emb|AL589988.7| Human DNA sequence from clone RP11-10D13 on chro... 40 6.3
19emb|Y13117.1|PPINMP Paramecium primaurelia genes encoding cAMP-d... 40 6.3
20gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, com... 40 6.3
21gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome... 40 6.3
22emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 6.3
23emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, ... 40 6.3
24gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, co... 40 6.3
25gb|AC104350.6| Homo sapiens chromosome 8, clone RP11-1112C15, co... 40 6.3
26gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map ... 40 6.3
27gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosom... 40 6.3
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
31gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, comple... 40 6.3
32gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, comple... 40 6.3
33gb|AC115592.2| Dictyostelium discoideum chromosome 2 map 1-12595... 40 6.3
34gb|AC063956.7|AC063956 Homo sapiens 4 BAC RP11-529K3 (Roswell Pa... 40 6.3
35dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
37gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosom... 40 6.3
38gb|AF245484.1|AF245484 Oryza sativa OSE2 (OSE2) gene, complete cds 40 6.3
39dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
40dbj|BS000027.1| Pan troglodytes chromosome 22 clone:PTB-075O22, ... 40 6.3
41gb|AE001439.1| Helicobacter pylori J99, complete genome 40 6.3
42emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in ... 40 6.3
43dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.3
44dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.3
45gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence 40 6.3
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
47gb|AF076274.1|T27D20 Arabidopsis thaliana BAC T27D20 40 6.3
48emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.3
49gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, comple... 40 6.3
50gb|M31077.1|HUMSTATH1 Human salivary statherin gene, 5' flank 40 6.3
51dbj|AP001172.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.3
52dbj|AP001184.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.3 
>emb|AL162723.12| Human DNA sequence from clone RP13-428K23 on chromosome X, complete
             sequence
          Length = 192780

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 14    tagaaaatattggtattcaaactt 37
             ||||||||||||||||||||||||
Sbjct: 15008 tagaaaatattggtattcaaactt 14985



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 15    agaaaatattggtattcaaactt 37
             |||||||||||||||||||||||
Sbjct: 14960 agaaaatattggtattcaaactt 14938
to top
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 26     gtattcaaactttaaaatttcaaa 49
              ||||||||||||||||||||||||
Sbjct: 475934 gtattcaaactttaaaatttcaaa 475957
to top
>gb|AC010905.3|AC010905 Homo sapiens BAC clone RP11-560B8 from Y, complete sequence
          Length = 152599

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 14     tagaaaatattggtattcaaactt 37
              ||||||||||||||||||||||||
Sbjct: 128792 tagaaaatattggtattcaaactt 128769



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 15     agaaaatattggtattcaaactt 37
              |||||||||||||||||||||||
Sbjct: 128744 agaaaatattggtattcaaactt 128722
to top
>gb|AC024226.11|AC024226 Genomic Sequence For Arabidopsis thaliana Clone T32B03 From Chromosome
             V, complete sequence
          Length = 96262

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 32    aaactttaaaatttcaaaataca 54
             |||||||||||||||||||||||
Sbjct: 24012 aaactttaaaatttcaaaataca 24034



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    caaactttaaaatttcaaaa 50
             ||||||||||||||||||||
Sbjct: 22668 caaactttaaaatttcaaaa 22687
to top
>ref|XM_949082.1| Theileria annulata strain Ankara hypothetical protein (TA20082)
           partial mRNA
          Length = 2985

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 14  tagaaaatattggtattcaaac 35
           ||||||||||||||||||||||
Sbjct: 929 tagaaaatattggtattcaaac 950
to top
>ref|XM_949084.1| Theileria annulata strain Ankara hypothetical protein (TA20085)
           partial mRNA
          Length = 1398

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 14  tagaaaatattggtattcaaac 35
           ||||||||||||||||||||||
Sbjct: 926 tagaaaatattggtattcaaac 947
to top
>emb|Z82206.1|HS370M22 Human DNA sequence from clone RP3-370M22 on chromosome 22, complete
             sequence
          Length = 143747

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 440   cttctttatgcttgggttcagtttta 465
             ||||||||||||||| ||||||||||
Sbjct: 46454 cttctttatgcttggtttcagtttta 46429
to top
>emb|AJ291830.1|TAN291830 Theileria annulata TashAT3 gene
          Length = 3360

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 14   tagaaaatattggtattcaaac 35
            ||||||||||||||||||||||
Sbjct: 1073 tagaaaatattggtattcaaac 1094
to top
>emb|AJ291829.1|TAN291829 Theileria annulata TashAT1 gene
          Length = 1921

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 14   tagaaaatattggtattcaaac 35
            ||||||||||||||||||||||
Sbjct: 979  tagaaaatattggtattcaaac 1000
to top
>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 280    tttgtatacttctcaactgtttgaa 304
              |||||||||||||||| ||||||||
Sbjct: 118318 tttgtatacttctcaattgtttgaa 118294
to top
>emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, complete sequence
          Length = 198050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   tttgaaattagccatggcaag 319
             |||||||||||||||||||||
Sbjct: 47046 tttgaaattagccatggcaag 47066
to top
>gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, complete sequence
          Length = 200918

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    ttaaaatttcaaaatacatac 57
             |||||||||||||||||||||
Sbjct: 58599 ttaaaatttcaaaatacatac 58579
to top
>gb|AF286887.4| Homo sapiens chromosome 8 clone RP11-206N20 map q12.1, complete
             sequence
          Length = 192948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tttaaaatttcaaaatacat 55
             ||||||||||||||||||||
Sbjct: 84920 tttaaaatttcaaaatacat 84901
to top
>emb|AL032618.1|CEY42A5A Caenorhabditis elegans YAC Y42A5A, complete sequence
          Length = 22557

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 27   tattcaaactttaaaatttcaaaa 50
            ||||||||||||||||||| ||||
Sbjct: 2999 tattcaaactttaaaattttaaaa 2976
to top
>gb|AC004926.2| Homo sapiens PAC clone RP5-910H9 from 7, complete sequence
          Length = 153556

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     aaactttaaaatttcaaaat 51
              ||||||||||||||||||||
Sbjct: 134211 aaactttaaaatttcaaaat 134192
to top
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence
          Length = 131611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   aactttaaaatttcaaaata 52
            ||||||||||||||||||||
Sbjct: 4443 aactttaaaatttcaaaata 4424
to top
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence
          Length = 130999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    aaatttcaaaatacatacta 59
             ||||||||||||||||||||
Sbjct: 37958 aaatttcaaaatacatacta 37977
to top
>emb|AL589988.7| Human DNA sequence from clone RP11-10D13 on chromosome 10 Contains part
             of the gene for adenovirus 5 E1A binding protein (BS69),
             complete sequence
          Length = 74573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     ttaaaggtagaaaatattgg 26
             ||||||||||||||||||||
Sbjct: 58884 ttaaaggtagaaaatattgg 58903
to top
>emb|Y13117.1|PPINMP Paramecium primaurelia genes encoding cAMP-dependent protein kinase,
            peptidylprolyl isomerase and NMP kinase
          Length = 8033

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    gataaattaaaggtagaaaa 20
            ||||||||||||||||||||
Sbjct: 4237 gataaattaaaggtagaaaa 4256
to top
>gb|AC006269.13| Homo sapiens chromosome , clone RP11-515E23, complete sequence
          Length = 167229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   gttcttctttatgcttgggt 456
             ||||||||||||||||||||
Sbjct: 49841 gttcttctttatgcttgggt 49860
to top
>gb|AC163356.2| Mus musculus BAC clone RP23-13A21 from chromosome 6, complete sequence
          Length = 212612

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   agaaactttgtatacttctc 293
             ||||||||||||||||||||
Sbjct: 37195 agaaactttgtatacttctc 37214
to top
>emb|BX571865.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             7/17
          Length = 348813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    tttaaaatttcaaaatacatacta 59
             ||||||||||||||||| ||||||
Sbjct: 72401 tttaaaatttcaaaataaatacta 72378
to top
>emb|AL161499.2|ATCHRIV11 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 11
          Length = 198022

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     aaactttaaaatttcaaaat 51
              ||||||||||||||||||||
Sbjct: 176170 aaactttaaaatttcaaaat 176189
to top
>gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 433    cagagttcttctttatgctt 452
              ||||||||||||||||||||
Sbjct: 120873 cagagttcttctttatgctt 120892
to top
>gb|AC104350.6| Homo sapiens chromosome 8, clone RP11-1112C15, complete sequence
          Length = 152908

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    tttaaaatttcaaaatacat 55
             ||||||||||||||||||||
Sbjct: 84921 tttaaaatttcaaaatacat 84902
to top
>gb|AC006284.4| Arabidopsis thaliana chromosome 2 clone T4M8 map CIC11A04, complete
             sequence
          Length = 89137

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    caaactttaaaatttcaaaa 50
             ||||||||||||||||||||
Sbjct: 62193 caaactttaaaatttcaaaa 62174
to top
>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence
          Length = 181390

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ttaaaatttcaaaatacata 56
             ||||||||||||||||||||
Sbjct: 49671 ttaaaatttcaaaatacata 49652
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      tttatgcttgggttcagttt 463
                ||||||||||||||||||||
Sbjct: 25810282 tttatgcttgggttcagttt 25810263
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 441      ttctttatgcttgggttcag 460
                ||||||||||||||||||||
Sbjct: 22743878 ttctttatgcttgggttcag 22743897
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 121      acatagacaaaaacactata 140
                ||||||||||||||||||||
Sbjct: 37548873 acatagacaaaaacactata 37548892
to top
>gb|AC104812.5| Homo sapiens BAC clone RP11-656O23 from 2, complete sequence
          Length = 120574

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    atttcaaaatacatactatg 61
             ||||||||||||||||||||
Sbjct: 44806 atttcaaaatacatactatg 44787
to top
>gb|AC079235.7| Homo sapiens BAC clone RP11-495O23 from 2, complete sequence
          Length = 212237

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    tttgactccatgagaagaaa 278
              ||||||||||||||||||||
Sbjct: 112247 tttgactccatgagaagaaa 112266
to top
>gb|AC115592.2| Dictyostelium discoideum chromosome 2 map 1-125959 strain AX4, complete
             sequence
          Length = 125958

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    tttaaaatttcaaaatacatacta 59
             |||||||||||| |||||||||||
Sbjct: 17289 tttaaaatttcacaatacatacta 17312
to top
>gb|AC063956.7|AC063956 Homo sapiens 4 BAC RP11-529K3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 141568

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   catgagaagaaactttgtat 286
             ||||||||||||||||||||
Sbjct: 36607 catgagaagaaactttgtat 36626
to top
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0505D12
          Length = 146951

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    acatagacaaaaacactata 140
              ||||||||||||||||||||
Sbjct: 143410 acatagacaaaaacactata 143429
to top
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0677H08
          Length = 178830

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  acatagacaaaaacactata 140
            ||||||||||||||||||||
Sbjct: 9347 acatagacaaaaacactata 9366
to top
>gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosome 6, complete sequence
          Length = 216956

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ttaaaatttcaaaatacata 56
             ||||||||||||||||||||
Sbjct: 17552 ttaaaatttcaaaatacata 17571
to top
>gb|AF245484.1|AF245484 Oryza sativa OSE2 (OSE2) gene, complete cds
          Length = 4834

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  acatagacaaaaacactata 140
            ||||||||||||||||||||
Sbjct: 4737 acatagacaaaaacactata 4718
to top
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0633E08
          Length = 136471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   ttctttatgcttgggttcag 460
             ||||||||||||||||||||
Sbjct: 30829 ttctttatgcttgggttcag 30848
to top
>dbj|BS000027.1| Pan troglodytes chromosome 22 clone:PTB-075O22, map 22, complete
             sequences
          Length = 43451

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acatagacaaaaacactata 140
             ||||||||||||||||||||
Sbjct: 11439 acatagacaaaaacactata 11420
to top
>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    tttgaaattagccatggcaa 318
              ||||||||||||||||||||
Sbjct: 197092 tttgaaattagccatggcaa 197073
to top
>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19,
             complete sequence
          Length = 170213

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   tgcttgggttcagttttact 467
             ||||||||||||||||||||
Sbjct: 78746 tgcttgggttcagttttact 78765
to top
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete
              sequence
          Length = 168565

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tgtgaacaatggcaccccaa 224
              ||||||||||||||||||||
Sbjct: 164730 tgtgaacaatggcaccccaa 164749
to top
>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   acatagacaaaaacactata 140
             ||||||||||||||||||||
Sbjct: 67487 acatagacaaaaacactata 67468
to top
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
          Length = 184425

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   tacatagacaaaaacactat 139
             ||||||||||||||||||||
Sbjct: 25380 tacatagacaaaaacactat 25399
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 444      tttatgcttgggttcagttt 463
                ||||||||||||||||||||
Sbjct: 25738458 tttatgcttgggttcagttt 25738439
to top
>gb|AF076274.1|T27D20 Arabidopsis thaliana BAC T27D20
          Length = 80446

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    aaactttaaaatttcaaaat 51
             ||||||||||||||||||||
Sbjct: 21511 aaactttaaaatttcaaaat 21492
to top
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137492

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   tttatgcttgggttcagttt 463
             ||||||||||||||||||||
Sbjct: 31733 tttatgcttgggttcagttt 31714
to top
>gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, complete sequence
          Length = 192625

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    agaaactttgtatacttctc 293
              ||||||||||||||||||||
Sbjct: 149042 agaaactttgtatacttctc 149061
to top
>gb|M31077.1|HUMSTATH1 Human salivary statherin gene, 5' flank
          Length = 1931

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 267 catgagaagaaactttgtat 286
           ||||||||||||||||||||
Sbjct: 107 catgagaagaaactttgtat 126
to top
>dbj|AP001172.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B812E1, LL56-APP
              region, complete sequence
          Length = 149114

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    acatagacaaaaacactata 140
              ||||||||||||||||||||
Sbjct: 147567 acatagacaaaaacactata 147548
to top
>dbj|AP001184.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-715F10,
           complete sequences
          Length = 120186

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 205 tgtgaacaatggcaccccaa 224
           ||||||||||||||||||||
Sbjct: 844 tgtgaacaatggcaccccaa 863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,190,794
Number of Sequences: 3902068
Number of extensions: 5190794
Number of successful extensions: 105988
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105728
Number of HSP's gapped (non-prelim): 260
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top