>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 18/25 (72%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = -1

Query: 439 NGDANGANSGSRR--TPNRLPPAPP 371
           NGDA    SGS R  TPNRLPPAPP
Sbjct: 882 NGDAASPGSGSNRRTTPNRLPPAPP 906

>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 15/23 (65%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
 Frame = -1

Query: 433 DANGANSGSRRT-PNRLPPAPPK 368
           D++G+   SRRT PNRLPPAPP+
Sbjct: 891 DSSGSGGSSRRTTPNRLPPAPPQ 913

>YMER_STAAU (P08655) Hypothetical 19.7 kDa protein in mercuric resistance|
           operon
          Length = 180

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = -2

Query: 435 GTPMVPIQAADAHQIGCHLHRRNTKDVDW 349
           G P+ P+ +AD+H +  +L + N+K +++
Sbjct: 40  GLPLTPVASADSHVVASNLLKGNSKKIEY 68

>LACR_STAXY (O33813) Lactose operon transcription activator|
          Length = 279

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
 Frame = +3

Query: 192 YIAYIFL*TTEVLWIHT---IHAISRQLSILHPSLFSHQYHKGVRACHEKYDSHIA 350
           Y+ YI +     L IHT   I  ISRQ+    P LFS  + K       +Y  H +
Sbjct: 219 YLTYIRMYHASQLLIHTSTLISDISRQVGYKDPLLFSKNFTKHFEISASEYRHHFS 274

>CAT8_YEAST (P39113) Regulatory protein CAT8|
          Length = 1433

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 439 NGDANGANSGSRRTPNRLPPAPP 371
           NG  +G NSGS  +P   PP PP
Sbjct: 190 NGKMDGDNSGSAMSPLGAPPPPP 212

>RL28B_SCHPO (P57728) 60S ribosomal protein L28-B|
          Length = 148

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = +3

Query: 276 HPSLFSHQYHKGVRACH---EKYDSHIANQHP*YFGGAGGNRFGVRRLPELAP 425
           H  +  H+ H G R      +   SH    HP YFG  G  RF + + P   P
Sbjct: 19  HGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNPLWRP 71

>RL28A_SCHPO (P36585) 60S ribosomal protein L28-A (L27A) (L29)|
          Length = 148

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
 Frame = +3

Query: 276 HPSLFSHQYHKGVRACH---EKYDSHIANQHP*YFGGAGGNRFGVRRLPELAP 425
           H  +  H+ H G R      +   SH    HP YFG  G  RF + + P   P
Sbjct: 19  HGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNPLWRP 71

>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)|
           (Basic transcription element-binding protein 3)
           (BTE-binding protein 3) (RANTES factor of late activated
           T-lymphocytes 1) (RFLAT-1) (Erythroid transcription
           factor FKLF-2)
          Length = 289

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 424 GANSGSRRTPNRLPPAPP 371
           GA +   RTP RLPPAPP
Sbjct: 85  GAAARKARTPCRLPPAPP 102

>TNR3_MOUSE (P50284) Tumor necrosis factor receptor superfamily member 3|
           precursor (Lymphotoxin-beta receptor)
          Length = 415

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -2

Query: 309 PCDIDGKTDWDEE*RAGERSHEWCVSRGP--QLFIEICRLCMVIVTRSF---CYIDQSDA 145
           P  I+ +T WD++    E  H+ C SR P  +    +C      V ++     Y +  + 
Sbjct: 35  PYRIENQTCWDQDKEYYEPMHDVCCSRCPPGEFVFAVCSRSQDTVCKTCPHNSYNEHWNH 94

Query: 144 LSACEILLP 118
           LS C++  P
Sbjct: 95  LSTCQLCRP 103

>SYM_LISMO (Q8YAF2) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 664

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 20  NIIHQWVKMIHCKFDGRLTSYNNRVQNQDQLIC---GNKISQAERASD 154
           N++++ V MI+  FDG + +Y   V   DQ++     N + + E + D
Sbjct: 368 NLLNRTVAMINKYFDGEIPAYQGNVTEFDQILVDFKNNVVKEYEGSMD 415


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,686,671
Number of Sequences: 219361
Number of extensions: 1312688
Number of successful extensions: 3048
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3047
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)