ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC168092.3| Mus musculus BAC clone RP23-142H1 from chromosome... 42 1.6
2gb|AC020632.16| Homo sapiens 3 BAC RP11-333H9 (Roswell Park Canc... 42 1.6
3gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, com... 42 1.6
4ref|XM_480669.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
5gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
6gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
7ref|XM_993959.1| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
8ref|XM_622629.3| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
9ref|XM_001001861.1| PREDICTED: Mus musculus golgi autoantigen, g... 40 6.3
10ref|XM_916950.2| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
11ref|XM_901689.2| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
12ref|XM_148244.7| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
13ref|XM_901694.2| PREDICTED: Mus musculus golgi autoantigen, golg... 40 6.3
14gb|AC119395.2| Mus musculus chromosome 8 clone MGS1-178N23 map A... 40 6.3
15gb|BC060254.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.3
16gb|BC042759.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.3
17gb|BC040461.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.3
18emb|AL445592.15| Human DNA sequence from clone RP11-660M15 on ch... 40 6.3
19emb|AL355336.15| Human DNA sequence from clone RP11-405O10 on ch... 40 6.3
20emb|AL162386.17| Human DNA sequence from clone RP11-272P10 on ch... 40 6.3
21emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H1... 40 6.3
22emb|AJ245950.1|HSA245950 Halobacterium salinarum basT gene for c... 40 6.3
23emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 i... 40 6.3
24gb|AC154763.2| Mus musculus BAC clone RP24-422J16 from chromosom... 40 6.3
25dbj|AK220188.1| Mus musculus mRNA for mKIAA4151 protein 40 6.3
26dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.3
27ref|XM_689816.1| PREDICTED: Danio rerio similar to protein kinas... 40 6.3
28gb|BC076106.1| Danio rerio T-cell acute lymphocytic leukemia 2, ... 40 6.3
29dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
32dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
33gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the... 40 6.3
34dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
35dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
36dbj|AK073389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
37emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O1... 40 6.3
38gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
39gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
40gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, comple... 40 6.3
41emb|CT009705.9| Zebrafish DNA sequence from clone DKEYP-81C5 in ... 40 6.3
42gb|U75437.1|HSU75437 Halobacterium salinarium transducer HtC pro... 40 6.3
43dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, ... 40 6.3 
>gb|AC168092.3| Mus musculus BAC clone RP23-142H1 from chromosome 6, complete sequence
          Length = 213498

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 242    tcttacatcacatctcacttccttg 266
              |||||||||||||||| ||||||||
Sbjct: 177463 tcttacatcacatctcccttccttg 177439
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>gb|AC020632.16| Homo sapiens 3 BAC RP11-333H9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 162029

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 424    ttctctgaagtccagcagcct 444
              |||||||||||||||||||||
Sbjct: 143530 ttctctgaagtccagcagcct 143510
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>gb|AC007353.5| Homo sapiens chromosome 16 clone RP11-488I20, complete sequence
          Length = 201061

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   ataacctatgcacaatctctt 245
             |||||||||||||||||||||
Sbjct: 44576 ataacctatgcacaatctctt 44596
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>ref|XM_480669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 624

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 352 cgagacgcagcccccgttgctcct 375
           |||||||| |||||||||||||||
Sbjct: 249 cgagacgccgcccccgttgctcct 226
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 273   tcctgtagctacccatagacgataaaccccccgagaacac 312
             ||||||||||||| |  ||||||||||| || ||||||||
Sbjct: 44450 tcctgtagctaccaagcgacgataaaccgccagagaacac 44411
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBb0061I18, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   gcccccgttgctccttgggagatc 384
             |||||||| |||||||||||||||
Sbjct: 45875 gcccccgtagctccttgggagatc 45852
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>ref|XM_993959.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1 (Golgb1), mRNA
          Length = 10907

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 9408 cttctctgaagtccagcagc 9427
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>ref|XM_622629.3| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1, transcript variant 2 (Golgb1), mRNA
          Length = 4486

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 2626 cttctctgaagtccagcagc 2645
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>ref|XM_001001861.1| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
             macrogolgin 1, transcript variant 9 (Golgb1), mRNA
          Length = 13115

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   cttctctgaagtccagcagc 442
             ||||||||||||||||||||
Sbjct: 11616 cttctctgaagtccagcagc 11635
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>ref|XM_916950.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1, transcript variant 7 (Golgb1), mRNA
          Length = 10927

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 9428 cttctctgaagtccagcagc 9447
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>ref|XM_901689.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1, transcript variant 4 (Golgb1), mRNA
          Length = 11008

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 9509 cttctctgaagtccagcagc 9528
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>ref|XM_148244.7| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1, transcript variant 1 (Golgb1), mRNA
          Length = 11104

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 9605 cttctctgaagtccagcagc 9624
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>ref|XM_901694.2| PREDICTED: Mus musculus golgi autoantigen, golgin subfamily b,
            macrogolgin 1, transcript variant 6 (Golgb1), mRNA
          Length = 10907

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 9408 cttctctgaagtccagcagc 9427
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>gb|AC119395.2| Mus musculus chromosome 8 clone MGS1-178N23 map A3, complete sequence
          Length = 92300

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 185   ggtgacaactgagctcacaacaacatcc 212
             ||||||| ||||||||||| ||||||||
Sbjct: 13993 ggtgacacctgagctcacatcaacatcc 14020
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>gb|BC060254.1| Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1,
            mRNA (cDNA clone IMAGE:5696949), partial cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 1946 cttctctgaagtccagcagc 1965
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>gb|BC042759.1| Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1,
           mRNA (cDNA clone IMAGE:5035980), partial cds
          Length = 2370

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 423 cttctctgaagtccagcagc 442
           ||||||||||||||||||||
Sbjct: 857 cttctctgaagtccagcagc 876
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>gb|BC040461.1| Mus musculus golgi autoantigen, golgin subfamily b, macrogolgin 1,
            mRNA (cDNA clone IMAGE:4235255), partial cds
          Length = 4385

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 2842 cttctctgaagtccagcagc 2861
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>emb|AL445592.15| Human DNA sequence from clone RP11-660M15 on chromosome 9 Contains part
             of the JMJD2C gene for jumonji domain containing 2C,
             complete sequence
          Length = 69706

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ccaggtgacaactgagctca 201
             ||||||||||||||||||||
Sbjct: 54273 ccaggtgacaactgagctca 54292
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>emb|AL355336.15| Human DNA sequence from clone RP11-405O10 on chromosome 6 Contains the
             5' end of the RREB1 gene for ras responsive element
             binding protein 1, part of a novel gene and CpG islands,
             complete sequence
          Length = 169616

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   ataacctatgcacaatctct 244
             ||||||||||||||||||||
Sbjct: 30100 ataacctatgcacaatctct 30081
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>emb|AL162386.17| Human DNA sequence from clone RP11-272P10 on chromosome 9 Contains the 5'
              end of the MPDZ gene for multiple PDZ domain protein, a
              novel gene, an  inhibitor of growth family member 1 (ING1)
              pseudogene and a CpG island, complete sequence
          Length = 164138

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    gtccagcagcctgtcctttg 452
              ||||||||||||||||||||
Sbjct: 146242 gtccagcagcctgtcctttg 146223
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>emb|AL513412.3|HS403H13 Homo sapiens chromosome 9 BAC RP11-403H13, complete sequence
          Length = 191668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ccaggtgacaactgagctca 201
             ||||||||||||||||||||
Sbjct: 25543 ccaggtgacaactgagctca 25562
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>emb|AJ245950.1|HSA245950 Halobacterium salinarum basT gene for chemotaxis transducer protein
           BasT
          Length = 2618

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 cgagaacaccgagcgccgcg 323
           ||||||||||||||||||||
Sbjct: 256 cgagaacaccgagcgccgcg 275
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>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13,
              complete sequence
          Length = 182888

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 427    tctgaagtccagcagcctgt 446
              ||||||||||||||||||||
Sbjct: 109868 tctgaagtccagcagcctgt 109849
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>gb|AC154763.2| Mus musculus BAC clone RP24-422J16 from chromosome 16, complete
             sequence
          Length = 156818

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   cttctctgaagtccagcagc 442
             ||||||||||||||||||||
Sbjct: 62998 cttctctgaagtccagcagc 63017
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>dbj|AK220188.1| Mus musculus mRNA for mKIAA4151 protein
          Length = 6874

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  cttctctgaagtccagcagc 442
            ||||||||||||||||||||
Sbjct: 5377 cttctctgaagtccagcagc 5396
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     ccgagcgccgcgacgacggg 331
               ||||||||||||||||||||
Sbjct: 1663829 ccgagcgccgcgacgacggg 1663810
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>ref|XM_689816.1| PREDICTED: Danio rerio similar to protein kinase, cGMP-dependent,
            type I alpha isoform (LOC573557), mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  gactgggccagaggaacggg 351
            ||||||||||||||||||||
Sbjct: 1148 gactgggccagaggaacggg 1167
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>gb|BC076106.1| Danio rerio T-cell acute lymphocytic leukemia 2, mRNA (cDNA clone
            IMAGE:7013692)
          Length = 2592

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  gactgggccagaggaacggg 351
            ||||||||||||||||||||
Sbjct: 1721 gactgggccagaggaacggg 1740
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 273     tcctgtagctacccatagacgataaaccccccgagaacac 312
               ||||||||||||| |  ||||||||||| || ||||||||
Sbjct: 3369844 tcctgtagctaccaagcgacgataaaccgccagagaacac 3369883
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 361      gcccccgttgctccttgggagatc 384
                |||||||| |||||||||||||||
Sbjct: 12458300 gcccccgtagctccttgggagatc 12458323
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 352     cgagacgcagcccccgttgctcct 375
               |||||||| |||||||||||||||
Sbjct: 6713200 cgagacgccgcccccgttgctcct 6713177
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 306     agaacaccgagcgccgcgacgacg 329
               |||||||||||||||||| |||||
Sbjct: 3181760 agaacaccgagcgccgcgccgacg 3181783
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>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 cgagaacaccgagcgccgcg 323
           ||||||||||||||||||||
Sbjct: 135 cgagaacaccgagcgccgcg 116
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>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0089L03
          Length = 172106

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 352   cgagacgcagcccccgttgctcct 375
             |||||||| |||||||||||||||
Sbjct: 65602 cgagacgccgcccccgttgctcct 65579
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>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0003D23
          Length = 151604

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 352    cgagacgcagcccccgttgctcct 375
              |||||||| |||||||||||||||
Sbjct: 146547 cgagacgccgcccccgttgctcct 146524
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>dbj|AK073389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043I15, full
            insert sequence
          Length = 3374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 273  tcctgtagctacccatagacgataaaccccccgagaacac 312
            ||||||||||||| |  ||||||||||| || ||||||||
Sbjct: 3250 tcctgtagctaccaagcgacgataaaccgccagagaacac 3211
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>emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O18, complete sequence
          Length = 174798

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   gtccagcagcctgtcctttg 452
             ||||||||||||||||||||
Sbjct: 43365 gtccagcagcctgtcctttg 43346
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 361      gcccccgttgctccttgggagatc 384
                |||||||| |||||||||||||||
Sbjct: 12465640 gcccccgtagctccttgggagatc 12465663
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 273     tcctgtagctacccatagacgataaaccccccgagaacac 312
               ||||||||||||| |  ||||||||||| || ||||||||
Sbjct: 3378549 tcctgtagctaccaagcgacgataaaccgccagagaacac 3378588
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>gb|AC132407.3| Mus musculus BAC clone RP23-343G12 from 8, complete sequence
          Length = 205357

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 185   ggtgacaactgagctcacaacaacatcc 212
             ||||||| ||||||||||| ||||||||
Sbjct: 75595 ggtgacacctgagctcacatcaacatcc 75568
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>emb|CT009705.9| Zebrafish DNA sequence from clone DKEYP-81C5 in linkage group 14,
             complete sequence
          Length = 200808

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   gtcttctctgaagtccagca 440
             ||||||||||||||||||||
Sbjct: 35871 gtcttctctgaagtccagca 35890
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>gb|U75437.1|HSU75437 Halobacterium salinarium transducer HtC protein (HtC) gene,
           complete cds
          Length = 2510

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 cgagaacaccgagcgccgcg 323
           ||||||||||||||||||||
Sbjct: 186 cgagaacaccgagcgccgcg 205
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>dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, complete cds
          Length = 9289

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 361  gcccccgttgctccttgggagatc 384
            |||||||| |||||||||||||||
Sbjct: 8581 gcccccgtagctccttgggagatc 8604


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,193,425
Number of Sequences: 3902068
Number of extensions: 3193425
Number of successful extensions: 60313
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60088
Number of HSP's gapped (non-prelim): 225
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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