>SH2D5_PONPY (Q5R732) SH2 domain-containing protein 5|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -2

Query: 355 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 185
           G  P K  S   GL R+PFGR    D+       L  +R +  + +  S    P +EGR+
Sbjct: 81  GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136

Query: 184 RPDHNGLTYC 155
           R    G  YC
Sbjct: 137 RHARLGNPYC 146

>SH2D5_HUMAN (Q6ZV89) SH2 domain-containing protein 5|
          Length = 339

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -2

Query: 355 GGRPSKEDSERAGLQRQPFGRVQEGDRRG*PAQNLPDYRHIRLQAITASA---PLAEGRS 185
           G  P K  S   GL R+PFGR    D+       L  +R +  + +  S    P +EGR+
Sbjct: 81  GEVPLKPLSSSGGLVREPFGR----DQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRA 136

Query: 184 RPDHNGLTYC 155
           R    G  YC
Sbjct: 137 RHARLGNPYC 146

>RUVA_SYMTH (Q67Q98) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 205

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/66 (31%), Positives = 35/66 (53%)
 Frame = -3

Query: 372 FDEYIKVDAPQRRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPLHRSLK 193
           F+  ++VD    + V++ V S    A F++A+A +DL   CR+  I G K ++ L   LK
Sbjct: 72  FELLLRVDGVGPK-VALAVLSTTDPAAFRRAVAFEDLDAICRVPGI-GRKTAQRLVLELK 129

Query: 192 GGPGRI 175
              G +
Sbjct: 130 DKIGAV 135

>PDLI7_CHICK (Q679P3) PDZ and LIM domain protein 7 (LIM mineralization protein)|
          Length = 416

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 102 QNWVHACGDRLCTTLQTMQ 158
           QN + ACGDRLC TL   Q
Sbjct: 67  QNRIRACGDRLCLTLSRAQ 85

>SPB8_BOVIN (Q5BIR5) Serpin B8|
          Length = 374

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 198 ASGAEAVIA*SRICR*SGKFWAGHP 272
           A+GA AV+  SR CR   KF A HP
Sbjct: 328 AAGATAVVRNSRCCRMEPKFCADHP 352

>LY9_MOUSE (Q01965) T-lymphocyte surface antigen Ly-9 precursor (Lymphocyte|
           antigen 9) (Cell-surface molecule Ly-9)
          Length = 654

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = -3

Query: 339 RRTVSVQVFSGNHSAEFKKAIAEDDLPKTCRITDIFGFKRSRPL 208
           R    +  + G+H+    +++ + DLP TC+  +      S+P+
Sbjct: 193 REDTHLNTYDGSHTLRVSQSVCDPDLPYTCKAWNPVSQNSSQPV 236

>PT1_MYCGE (P47668) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 572

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +3

Query: 30  YMVYSIHDGLMALCNRVRPSRKINQNWVHACGDRLCTTLQTMQYVSPL*SGLDLPSAS 203
           Y+   ++  L+ L   V    K+N  W   CG+     + + QY  PL  GL L   S
Sbjct: 468 YLYQPLNPALLRLIKLVVEGGKLNNVWTGMCGE-----MASDQYAIPLLLGLGLTELS 520

>FEOB_LEGPL (Q5WTE1) Ferrous iron transport protein B|
          Length = 751

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 44  HT*WINGIVQSCATIEKNQSKLGSCVW*QTMYYTADHAVCQSI 172
           H  ++ GI  +  +I  N S+LGS +W       AD  + QS+
Sbjct: 601 HFDFLGGIKAAFGSIPANLSELGSALWNPVSASAADSELSQSV 643

>DMDA_DROME (Q9VDW6) Dystrophin, isoforms A/C/DLP1/DLP3|
          Length = 3497

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +1

Query: 271 LGDRLLELCRMVAAEDLHAHCPPLRGVHLYVL 366
           L  R  ++ +++ AED+H H P  + + +YV+
Sbjct: 192 LAHRHFKIEKLLDAEDVHTHKPDNKSIQMYVM 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,408,626
Number of Sequences: 219361
Number of extensions: 1261592
Number of successful extensions: 2725
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)