>ATPD_STRLI (P50008) ATP synthase delta chain (EC 3.6.3.14)|
          Length = 272

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
 Frame = -1

Query: 333 LLGLRNIRLSQRQATLD----E*SRMGTIKSIFQELRAGVQLPSAMTSVVSSRLAGFL-- 172
           L  + ++  +Q++  LD    E  R G I S   ELRA +   SA T+  S  LAG L  
Sbjct: 103 LANIADLTAAQKRGRLDNVEDELFRFGRIISSNTELRAALTSRSATTAAKSELLAGLLGS 162

Query: 171 --*RTTDLSHNRACRNPNSRTMRTSAVGLT 88
              RTT+    R    P  R++ +    L+
Sbjct: 163 RAERTTERLVTRLVTAPRGRSLESGLESLS 192

>NU4M_MACRO (P92668) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
 Frame = +2

Query: 173 KKPASRE---LTTLVIAEGS*TPALSS*KMLLMVPILDHSSK----VACRWDNLMLRNPK 331
           K+P +R+   LTTL+I + S   A SS ++++   + + +      +  RW N   R   
Sbjct: 86  KEPLNRKKTFLTTLIILQTSLIMAFSSSELIMFYIMFEATLIPTLIIITRWGNQNERLNA 145

Query: 332 RYFYIFLILS*STAITIGFQQAHEREENLH 421
             +++F  L+ S  + +     H +   LH
Sbjct: 146 GLYFLFYTLTGSLPLLVALLYLHSKIGTLH 175

>EF1A_YEAST (P02994) Elongation factor 1-alpha (EF-1-alpha) (Translation|
           elongation factor 1A) (Eukaryotic elongation factor 1A)
           (eEF1A)
          Length = 458

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +2

Query: 266 PILD-HSSKVACRWDNLMLRNPKR 334
           P+LD H++ +ACR+D L+ +N +R
Sbjct: 357 PVLDCHTAHIACRFDELLEKNDRR 380


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,695,027
Number of Sequences: 219361
Number of extensions: 1033955
Number of successful extensions: 2363
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2363
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)