>CH60_CLOBO (Q8KJ24) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 543

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +3

Query: 39  LNATMQSLNVLITDK*VSVSTPHYRQILEQMTLQSMKLEQMLHPIQGDCLITI 197
           + A +++  +L+TDK +S +      ILEQ+  Q  KL  +   I+G+ L T+
Sbjct: 209 MEAVLENPYILLTDKKIS-NIQEILPILEQIVQQGKKLLIIAEDIEGEALATL 260

>POLG_HCVSA (O91936) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3013

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/60 (21%), Positives = 32/60 (53%)
 Frame = +3

Query: 15   NNSIVYIILNATMQSLNVLITDK*VSVSTPHYRQILEQMTLQSMKLEQMLHPIQGDCLIT 194
            ++++VY   + +       +T   + V   HYR+++++M   + K++  L P++  C +T
Sbjct: 2455 HHNLVYSTSSRSAGQRQKKVTFDRLQVLDDHYREVVDEMKRLASKVKARLLPLEEACGLT 2514


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,105,092
Number of Sequences: 219361
Number of extensions: 514662
Number of successful extensions: 1287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)