>ZYG1_CAEBR (Q621J7) Probable serine/threonine-protein kinase zyg-1 (EC|
           2.7.11.1) (Zygote defective protein 1)
          Length = 709

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 21/59 (35%), Positives = 28/59 (47%)
 Frame = +3

Query: 231 RSERDGCTLQHAIGPCRQPPEEVQRNRRHLVAEPRVPQGVQACKENHNTERCDVQDDRS 407
           RS RDG +L+      R+PP    R+    V   R P G +A  E   T R  V+ DR+
Sbjct: 279 RSSRDGISLE------RRPPA---RSSSQPVNSRRDPDGYRAAHEMPTTSRTSVEPDRA 328

>IPT_PSESS (P06619) Isopentenyl transferase (Dimethylallyl transferase) (EC|
           2.5.1.-) (Trans-zeatin producing protein)
          Length = 234

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 237 ERDGCTLQHAIGPCRQPPEEVQRNRRHLVAEPRVPQGVQACKENHNTERCDV 392
           +R  C    A G  R  PEE+Q  RR  +   R+ +GV + +E ++  + +V
Sbjct: 33  DRVQCCFDIATGSGRPHPEELQSTRRIYLDNRRISEGVISAEEANDRLKLEV 84

>XYLT1_PANTR (Q5QQ57) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 945

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 19/43 (44%), Positives = 22/43 (51%)
 Frame = +3

Query: 219 GAGSRSERDGCTLQHAIGPCRQPPEEVQRNRRHLVAEPRVPQG 347
           GAG R  R G     A+G   QPP   +R RR L AEP   +G
Sbjct: 41  GAGER--RGGA----AVGGGEQPPPAPRRERRDLPAEPAAARG 77

>AERA_AERSO (Q06304) Aerolysin precursor (Hemolysin)|
          Length = 488

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 58  KDQNHPKTQTYRQRKRLQTTT*FSSIFRQPRVDP--IIISVAAIEH-ARHRATETSKALD 228
           K  N  KT TY   +++ T     + F+ P V    + I +AA +  A  +   T++ + 
Sbjct: 246 KATNWSKTDTYSLSEKVTT----KNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVS 301

Query: 229 REARETVAPYSMLSV 273
            EAR TV P+S L V
Sbjct: 302 VEARPTVPPHSSLPV 316

>AERA_AERSA (Q08676) Aerolysin precursor (Hemolysin-3)|
          Length = 489

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +1

Query: 58  KDQNHPKTQTYRQRKRLQTTT*FSSIFRQPRVDP--IIISVAAIEH-ARHRATETSKALD 228
           K  N  KT TY   +++ T     + F+ P V    + I +AA +  A  +   T++ + 
Sbjct: 247 KATNWSKTDTYSLSEKVTT----KNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVS 302

Query: 229 REARETVAPYSMLSV 273
            EAR TV P+S L V
Sbjct: 303 VEARPTVPPHSSLPV 317

>ZAN_MOUSE (O88799) Zonadhesin precursor|
          Length = 5376

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
 Frame = -3

Query: 381  VPCCGFP---CRPVHPEAPEVPPQDAVCSAE---------LLQEAACKD-R*HAVRCNR- 244
            +P C  P   C    P AP    +  VC A+         L  +  CKD +   +  N+ 
Sbjct: 4278 LPSCFDPEGLCGGASPRAPSTCREGCVCEADYVLREDKCVLRTQCGCKDAQGDLIPANKT 4337

Query: 243  -LSRFAIQRLTCFGGSMPSMFYSC 175
             L+R   Q+ TC GG++    + C
Sbjct: 4338 WLTRGCAQKCTCKGGNIHCWNFKC 4361

>SPRR4_MOUSE (Q8CGN8) Small proline-rich protein 4|
          Length = 76

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = +3

Query: 273 PCRQPPEEVQRNRRHLVAEPRVPQGVQACKENHNT----ERCDVQDD 401
           PC+ PP + Q        +P VPQ  + C     T    E+C  Q D
Sbjct: 24  PCQPPPTKCQEACVPKTKDPCVPQAKKQCPARSTTNPAQEKCPAQQD 70

>BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1|
          Length = 811

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 69  PS*NTDIQATEKATNNDIVQFNFSATPRRPH 161
           P  NT I     ATNN+I+Q N SA    P+
Sbjct: 563 PQANTLIPTNSTATNNEIIQGNVSANSMSPN 593

>NU5M_RHIST (P50367) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 654

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 211 TSKALDREARETVAPYSMLSVLAGSLLKKFSGTD 312
           T+K LDR A E V PY +++V   S   K SG D
Sbjct: 574 TNKILDRGAIELVGPYGLVNVFK-SASNKVSGLD 606

>SIPB_SALTY (Q56019) Cell invasion protein sipB (Effector protein sipB)|
          Length = 593

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 175 AAIEHARHRATETSKALDREARETV---APYSMLSVLAGSLLKKFSGT 309
           AA+E A   ATE  +ALD+    TV         +  A ++L KF GT
Sbjct: 186 AAVEQAGKEATEAKEALDKATDATVKAGTDAKAKAEKADNILTKFQGT 233

>SIPB_SALTI (Q56134) Cell invasion protein sipB (Effector protein sipB)|
          Length = 593

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 175 AAIEHARHRATETSKALDREARETV---APYSMLSVLAGSLLKKFSGT 309
           AA+E A   ATE  +ALD+    TV         +  A ++L KF GT
Sbjct: 186 AAVEQAGKEATEAKEALDKATDATVKAGTDAKAKAEKADNILTKFQGT 233

>SIPB_SALDU (Q79BT1) Cell invasion protein sipB (Effector protein sipB)|
          Length = 593

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 175 AAIEHARHRATETSKALDREARETV---APYSMLSVLAGSLLKKFSGT 309
           AA+E A   ATE  +ALD+    TV         +  A ++L KF GT
Sbjct: 186 AAVEQAGKEATEAKEALDKATDATVKAGTDAKAKAEKADNILTKFQGT 233

>VE7_HPV25 (P36823) Protein E7|
          Length = 102

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 142 QPRVDPIIISVAAIEHARHRATETSKALDREARETVAP 255
           QP V P+ +       A H+ TE   A+DR   + VAP
Sbjct: 19  QPEVQPVDLFCEEELPAEHQETEEEPAIDRTPYKVVAP 56

>CORT_DROME (Q960N3) Protein cortex|
          Length = 483

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 178 AIEHARHRATETSKALDREARETVAPYSMLSVLAGSLLKKFSGTDGILWRNL 333
           AI++A H        +D         Y+M+   +G ++   SG D +LWRNL
Sbjct: 146 AIQNATHEMPGICSPVD---------YNMMDWSSGGMVAMSSGQDVMLWRNL 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,989,701
Number of Sequences: 219361
Number of extensions: 1137380
Number of successful extensions: 3211
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3211
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)