ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY532594.1| Triticum aestivum minichromosomal maintenance fac... 289 4e-75
2gb|AY532593.1| Triticum aestivum minichromosomal maintenance fac... 218 1e-53
3gb|AY109731.1| Zea mays CL9169_1 mRNA sequence 139 8e-30
4dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
5gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
8gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, com... 42 1.4
9gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Canc... 42 1.4
10gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, co... 40 5.5
11gb|CY003699.1| Influenza A virus (A/New York/489/2003(H1N2)) seg... 40 5.5
12gb|CY003427.1| Influenza A virus (A/New York/407/2002(H3N2)) seg... 40 5.5
13gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, com... 40 5.5
14gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, comp... 40 5.5
15gb|CY001683.1| Influenza A virus (A/New York/78/2002(H1N2)) segm... 40 5.5
16emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on ch... 40 5.5
17gb|CY010719.1| Influenza A virus (A/New York/631/1996(H3N2)) seg... 40 5.5
18gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, com... 40 5.5
19gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, com... 40 5.5
20gb|CY001739.1| Influenza A virus (A/New York/276/2002(H3N2)) seg... 40 5.5
21gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.5
22emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10 40 5.5
23gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete ... 40 5.5
24dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.5
25gb|CY000548.1| Influenza A virus (A/New York/115/2002(H3N2)) seg... 40 5.5
26gb|CY000340.1| Influenza A virus (A/New York/135/2002(H3N2)) seg... 40 5.5
27emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 ... 40 5.5
28emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in... 40 5.5
29ref|NM_209992.1| Eremothecium gossypii AEL222Cp (AEL222C), mRNA 40 5.5
30emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 i... 40 5.5
31dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.5
32gb|CY003772.1| Influenza A virus (A/New York/417/2002(H1N2)) seg... 40 5.5
33gb|CY006398.1| Influenza A virus (A/New York/487/2003(H1N2)) seg... 40 5.5
34gb|CY006390.1| Influenza A virus (A/New York/481/2003(H1N2)) seg... 40 5.5
35dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094,... 40 5.5
36dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.5
37dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.5
38dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 5.5 
>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  289 bits (146), Expect = 4e-75
 Identities = 179/190 (94%)
 Strand = Plus / Minus

                                                                        
Query: 218  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 277
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                                                        
Query: 278  ggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtagatct 337
            ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtgagagctggagaagaacggcctcaggtcgtagatct 2804

                                                                        
Query: 338  catattcttgggccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtg 397
            ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2803 catattcttgggccttgttcttcaggtcatccactttaacctcaacgtgagtcaggcgtg 2744

                      
Query: 398  tggttgatcc 407
            ||||||||||
Sbjct: 2743 tggttgatcc 2734
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>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  218 bits (110), Expect = 1e-53
 Identities = 162/178 (91%), Gaps = 1/178 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    gatggcgtcaggtgcatataacactgaattatgacatcaagaaggtacaaacatctctaa 68
            ||||||||||| | |||| ||||||||||||||| |||||||||||||| ||||||| ||
Sbjct: 8259 gatggcgtcagttccata-aacactgaattatgatatcaagaaggtacagacatctcgaa 8201

                                                                        
Query: 69   atgccactggaggcacaagggtttcagatagcaaacagtacaccaacaccagaattcccg 128
            ||||| ||| |||||||||||||||||||||||||||||||||||| | ||||| || | 
Sbjct: 8200 atgccgctgtaggcacaagggtttcagatagcaaacagtacaccaatatcagaactctca 8141

                                                                      
Query: 129  taaaacagacacgagcagtcattttgccaacttacactacaagtggacatttctagct 186
             ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 8140 caaaacagacacaagcagtcattttgccgacttacactacaagtggacatttctagct 8083



 Score =  194 bits (98), Expect = 2e-46
 Identities = 128/138 (92%)
 Strand = Plus / Minus

                                                                        
Query: 215  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 274
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                                                        
Query: 275  ccaggacaaagctgttgtcgttgaagtgagagctggagaagaagggcctcagatcgtaga 334
            ||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtgagagctggagaagaacggcctcaggtcgtaga 7922

                              
Query: 335  tctcatattcttgggcct 352
            |||| || ||||||||||
Sbjct: 7921 tctcgtactcttgggcct 7904



 Score =  109 bits (55), Expect = 7e-21
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                       
Query: 350  ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgtggttgatccc 408
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7796 ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcgtgcggttgatccc 7738



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 196  gctcttgaacaaagaggtagctg 218
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063
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>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score =  139 bits (70), Expect = 8e-30
 Identities = 139/162 (85%)
 Strand = Plus / Plus

                                                                       
Query: 246 tggatgcttgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgaga 305
           ||||||| ||||||||||||||||||||||||| |  |||| ||||||  |||||   | 
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccagaaggaagccgttgtccctgaagcacgc 237

                                                                       
Query: 306 gctggagaagaagggcctcagatcgtagatctcatattcttgggccttgttcttcaggtc 365
           |||||||||||| ||| |||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 238 gctggagaagaacggcttcagatcgtagatctcgtattcttgggccttgttcctcaggtc 297

                                                     
Query: 366 atccactttaacctcgacatgagtcaggcgtgtggttgatcc 407
            |||| ||| |||||||| ||||| || |||| || ||||||
Sbjct: 298 ctccaatttgacctcgacgtgagtaagacgtgaggctgatcc 339
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>dbj|AK121422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N01, full
            insert sequence
          Length = 3214

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 254  tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 313
            |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 2949 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 2890

                                                                        
Query: 314  agaagggcctcagatcgtagatctcatattcttgggccttgttcttcaggtcatccactt 373
            |||| || ||||| || ||||| || || || |||||||||||||||||||| || ||||
Sbjct: 2889 agaacggtctcaggtcatagatttcgtactcctgggccttgttcttcaggtcctctactt 2830

                                  
Query: 374  taacctcgacatgagtcaggcg 395
            |||||||||  |||||||||||
Sbjct: 2829 taacctcgatgtgagtcaggcg 2808
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>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                          
Query: 254    tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 313
              |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 102793 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 102734

                                                     
Query: 314    agaagggcctcagatcgtagatctcatattcttgggcct 352
              |||| || ||||| || ||||| || || || |||||||
Sbjct: 102733 agaacggtctcaggtcatagatttcgtactcctgggcct 102695



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 350    ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 395
              |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 102584 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 102539
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 254      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 313
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16462194 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16462135

                                                       
Query: 314      agaagggcctcagatcgtagatctcatattcttgggcct 352
                |||| || ||||| || ||||| || || || |||||||
Sbjct: 16462134 agaacggtctcaggtcatagatttcgtactcctgggcct 16462096



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 350      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 395
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16461985 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16461940
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 254      tgatgatcccacgcccttcatccaggacaaagctgttgtcgttgaagtgagagctggaga 313
                |||||||||| |||||||| || ||||| ||| |||||||  ||||||| | ||||||||
Sbjct: 16553198 tgatgatcccccgcccttcgtcgaggacgaagttgttgtccctgaagtgggcgctggaga 16553139

                                                       
Query: 314      agaagggcctcagatcgtagatctcatattcttgggcct 352
                |||| || ||||| || ||||| || || || |||||||
Sbjct: 16553138 agaacggtctcaggtcatagatttcgtactcctgggcct 16553100



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 350      ccttgttcttcaggtcatccactttaacctcgacatgagtcaggcg 395
                |||||||||||||||| || |||||||||||||  |||||||||||
Sbjct: 16552989 ccttgttcttcaggtcctctactttaacctcgatgtgagtcaggcg 16552944
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>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 206    aaagaggtagctgaggttgat 226
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318
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>gb|AC069426.9| Homo sapiens 3 BAC RP11-200O17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128500

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 352   ttgttcttcaggtcatccactttaacctc 380
             ||||||||||||||| |||||| ||||||
Sbjct: 50709 ttgttcttcaggtcacccacttgaacctc 50737
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>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   cttcatccaggacaaagctg 288
             ||||||||||||||||||||
Sbjct: 21112 cttcatccaggacaaagctg 21093
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>gb|CY003699.1| Influenza A virus (A/New York/489/2003(H1N2)) segment 5, complete
           sequence
          Length = 1530

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 777 agatcgaagatctcatattcttgg 800
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>gb|CY003427.1| Influenza A virus (A/New York/407/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence
          Length = 202351

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cttcatccaggacaaagctg 288
             ||||||||||||||||||||
Sbjct: 33699 cttcatccaggacaaagctg 33718
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>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aaacatctctaaatgccact 76
              ||||||||||||||||||||
Sbjct: 104407 aaacatctctaaatgccact 104388
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>gb|CY001683.1| Influenza A virus (A/New York/78/2002(H1N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
             3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
             gene for integrin beta 1 (fibronectin receptor beta
             polypeptide antigen CD29 includes MDF2 MSK12), an
             adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel
             gene, the 5' end of a novel gene, a NADH dehydrogenase
             subunit 4L (ND4L) pseudogene, a pseudogene similar to part
             of integrin beta 2 (antigen CD18 (p95) lymphocyte
             function-associated antigen 1; macrophage antigen 1
             (mac-1) beta subunit) (ITGB2) and a CpG island, complete
             sequence
          Length = 197973

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ggaggcacaagggtttcaga 96
             ||||||||||||||||||||
Sbjct: 92711 ggaggcacaagggtttcaga 92692
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>gb|CY010719.1| Influenza A virus (A/New York/631/1996(H3N2)) segment 5, complete
           sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 777 agatcgaagatctcatattcttgg 800
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>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aaacatctctaaatgccact 76
              ||||||||||||||||||||
Sbjct: 117250 aaacatctctaaatgccact 117231
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>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaacatctctaaatgccact 76
             ||||||||||||||||||||
Sbjct: 25257 aaacatctctaaatgccact 25276
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>gb|CY001739.1| Influenza A virus (A/New York/276/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    gagctggagaagaagggcct 323
              ||||||||||||||||||||
Sbjct: 214396 gagctggagaagaagggcct 214377
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>emb|BX934130.2| Gallus gallus finished cDNA, clone ChEST267k10
          Length = 1947

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gttcttcaggtcatccactt 373
            ||||||||||||||||||||
Sbjct: 1258 gttcttcaggtcatccactt 1277
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>gb|AC108022.3| Homo sapiens BAC clone RP11-9D8 from 4, complete sequence
          Length = 162609

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tcaggtgcatataacactga 35
             ||||||||||||||||||||
Sbjct: 18559 tcaggtgcatataacactga 18578
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>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tgctgctactggatgcttga 256
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268
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>gb|CY000548.1| Influenza A virus (A/New York/115/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>gb|CY000340.1| Influenza A virus (A/New York/135/2002(H3N2)) segment 5, complete
           sequence
          Length = 1566

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 800 agatcgaagatctcatattcttgg 823
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>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tgctgctactggatgcttga 256
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431
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>emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
             complete sequence
          Length = 86323

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   cttcaggtcatccactttaa 376
             ||||||||||||||||||||
Sbjct: 16672 cttcaggtcatccactttaa 16691
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>ref|NM_209992.1| Eremothecium gossypii AEL222Cp (AEL222C), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 gagctggagaagaagggcct 323
           ||||||||||||||||||||
Sbjct: 46  gagctggagaagaagggcct 65
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>emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
             complete sequence
          Length = 144211

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   cttcaggtcatccactttaa 376
             ||||||||||||||||||||
Sbjct: 71855 cttcaggtcatccactttaa 71836
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>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tgctgctactggatgcttga 256
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418
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>gb|CY003772.1| Influenza A virus (A/New York/417/2002(H1N2)) segment 5, complete
           sequence
          Length = 1541

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 788 agatcgaagatctcatattcttgg 811
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>gb|CY006398.1| Influenza A virus (A/New York/487/2003(H1N2)) segment 5, complete
           sequence
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 755 agatcgaagatctcatattcttgg 778
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>gb|CY006390.1| Influenza A virus (A/New York/481/2003(H1N2)) segment 5, complete
           sequence
          Length = 1554

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 325 agatcgtagatctcatattcttgg 348
           |||||| |||||||||||||||||
Sbjct: 788 agatcgaagatctcatattcttgg 811
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>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gaacaaagaggtagctgagg 221
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746
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>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tgctgctactggatgcttga 256
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327
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>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tgctgctactggatgcttga 256
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244
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>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   tgctgctactggatgcttga 256
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,308,517
Number of Sequences: 3902068
Number of extensions: 3308517
Number of successful extensions: 72212
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72110
Number of HSP's gapped (non-prelim): 101
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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