ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl42f01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Minus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttgcagtttgaagctgct 355 ||||||||||||||| || ||||||| | |||||| || |||||| ||| | || | | Sbjct: 2910 catttcccatggcttctgctcactgatgcccttctggcgagcttgtggttaggagttaca 2851 Query: 356 tgatcatccatatttagcgaggccgcagattcagaccgcat 396 ||||||||||||| || |||||| || || ||||| ||||| Sbjct: 2850 tgatcatccatatataacgaggctgcggaatcagatcgcat 2810
>dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A04, full insert sequence Length = 577 Score = 50.1 bits (25), Expect = 0.006 Identities = 82/101 (81%) Strand = Plus / Minus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttgcagtttgaagctgct 355 ||||||||||||||| || ||||||| | |||||| || |||||| ||| | || | | Sbjct: 485 catttcccatggcttctgctcactgatgcccttctggcgagcttgtggttaggagttaca 426 Query: 356 tgatcatccatatttagcgaggccgcagattcagaccgcat 396 ||||||||||||| || |||||| || || ||||| ||||| Sbjct: 425 tgatcatccatatataacgaggctgcggaatcagatcgcat 385
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 32288239 catttcccatggcttctgctcactgatgcccttctggcgagcttg 32288283
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17, complete sequence Length = 103614 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 70924 ataaagacagtaaaatcactg 70944
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 22006 catttcccatggcttctgctcactgatgcccttctggcgagcttg 22050
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gattattaacttgttttcttc 133 ||||||||||||||||||||| Sbjct: 38382 gattattaacttgttttcttc 38402
>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17 Contains the 3' part of a novel gene similar to KIAA0953, a novel gene similar to POMC (propiomelanocortin), a novel gene similar to FCN2 (ficolin 2), a novel gene similar to SNX9 (sorting nexin 9) and a CpG island, complete sequence Length = 167272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 61152 ataaagacagtaaaatcactg 61172
>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8, complete sequence Length = 3967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 3034 ataaagacagtaaaatcactg 3054
>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14, complete sequence Length = 160419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 142341 ataaagacagtaaaatcactg 142321
>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24, complete sequence Length = 75984 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 70189 ataaagacagtaaaatcactg 70209
>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2, complete sequence Length = 173100 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 19038 ataaagacagtaaaatcactg 19058
>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5, complete sequence Length = 81891 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 26255 ataaagacagtaaaatcactg 26235
>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete sequence Length = 216373 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 1121 ataaagacagtaaaatcactg 1141
>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence Length = 135717 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 3010 ataaagacagtaaaatcactg 2990
>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3, complete sequence Length = 103014 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 49549 ataaagacagtaaaatcactg 49569
>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19, complete sequence Length = 230267 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 224437 ataaagacagtaaaatcactg 224457
>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence Length = 161452 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 gcagcagcactgcatgtaaat 195 ||||||||||||||||||||| Sbjct: 144622 gcagcagcactgcatgtaaat 144602
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 32637 ataaagacagtaaaatcactg 32657
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gcagcagcactgcatgtaaat 195 ||||||||||||||||||||| Sbjct: 47231 gcagcagcactgcatgtaaat 47251
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttcactgaagtccttctcgccagcttg 340 ||||||||||||||| || ||||||| | |||||| || |||||| Sbjct: 32378749 catttcccatggcttctgctcactgatgcccttctggcgagcttg 32378793
>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1, complete sequence Length = 171618 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 153913 ataaagacagtaaaatcactg 153933
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gattattaacttgttttcttc 133 ||||||||||||||||||||| Sbjct: 40171 gattattaacttgttttcttc 40191
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 116724 ataaagacagtaaaatcactg 116704
>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14, complete sequence Length = 195499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 117972 ataaagacagtaaaatcactg 117952
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 5751 ataaagacagtaaaatcactg 5771
>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete sequence Length = 190793 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 181340 ataaagacagtaaaatcactg 181360
>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence Length = 231581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 4717 ataaagacagtaaaatcactg 4737
>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence Length = 72631 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 11886 ataaagacagtaaaatcactg 11866
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 155662 ataaagacagtaaaatcactg 155642
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 catttcccatggcttttgttc 316 ||||||||||||||||||||| Sbjct: 70597 catttcccatggcttttgttc 70617
>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence Length = 69315 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcactg 42 ||||||||||||||||||||| Sbjct: 30437 ataaagacagtaaaatcactg 30457
>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence Length = 218177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 181004 gccaatctggagaacttggc 181023
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 32754 catgtttgggaagcaggtgg 32773
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 190626 catgtttgggaagcaggtgg 190645
>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome Length = 110907 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcactggaa 45 ||||||| |||||||||||||||| Sbjct: 46489 ataaagagagtaaaatcactggaa 46466
>ref|NM_133927.1| Mus musculus integrin alpha FG-GAP repeat containing 2 (Itfg2), mRNA Length = 2314 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2114 catgtttgggaagcaggtgg 2095
>emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 in linkage group 11, complete sequence Length = 88152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 25107 taaagacagtaaaatcactg 25126
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 61144 ataaagacagtaaaatcact 61125
>gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome 8, complete sequence Length = 189469 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 tcttcggatataaagacagtaaaatcac 40 ||||| |||||||| ||||||||||||| Sbjct: 40812 tcttctgatataaacacagtaaaatcac 40839
>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14, complete sequence Length = 160671 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 123615 taaagacagtaaaatcactg 123596
>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13, complete sequence Length = 206656 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 87206 ataaagacagtaaaatcact 87225
>emb|Z97629.1|HS128N22 Human DNA sequence from clone RP1-128N22 on chromosome Xq25-26.3, complete sequence Length = 98902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ttttgttcactgaagtcctt 328 |||||||||||||||||||| Sbjct: 87998 ttttgttcactgaagtcctt 87979
>gb|BC025492.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:36400 IMAGE:5309950), complete cds Length = 2312 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2121 catgtttgggaagcaggtgg 2102
>gb|BC014833.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:25499 IMAGE:4507661), complete cds Length = 2314 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2114 catgtttgggaagcaggtgg 2095
>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14, complete sequence Length = 110290 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 33521 ataaagacagtaaaatcact 33502
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete sequence Length = 185915 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 117941 taaagacagtaaaatcactg 117960
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 114351 cagcaggcagcagcactgca 114332
>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13, complete sequence Length = 118999 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 64528 ataaagacagtaaaatcact 64547
>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete sequence Length = 138906 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 110034 taaagacagtaaaatcactg 110053
>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25, complete sequence Length = 225139 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 ccatgcatgtttgggaagcaggtg 259 |||| ||||||||||||||||||| Sbjct: 88372 ccatccatgtttgggaagcaggtg 88395
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5, complete sequence Length = 142808 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 58143 ataaagacagtaaaatcact 58124
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 140978 ataaagacagtaaaatcact 140959
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 161662 taaagacagtaaaatcactg 161643
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 3802 taaagacagtaaaatcactg 3783
>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25, complete sequence Length = 176023 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 ccatgcatgtttgggaagcaggtg 259 |||| ||||||||||||||||||| Sbjct: 131041 ccatccatgtttgggaagcaggtg 131018
>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete sequence Length = 186721 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 130028 ataaagacagtaaaatcact 130009
>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence Length = 244779 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 205246 ataaagacagtaaaatcact 205227
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 161112 ataaagacagtaaaatcact 161131
>emb|CR590856.1| full-length cDNA clone CS0DF019YB20 of Fetal brain of Homo sapiens (human) Length = 1576 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 316 cactgaagtccttctcgccagcttgcag 343 |||||||| ||||||| ||||||||||| Sbjct: 1173 cactgaagaccttctccccagcttgcag 1200
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16, complete sequence Length = 92059 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 2989 ataaagacagtaaaatcact 3008
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 96372 ataaagacagtaaaatcact 96391
>dbj|AK134630.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330505C02 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2317 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2133 catgtttgggaagcaggtgg 2114
>dbj|AK147728.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270009J17 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 2115 catgtttgggaagcaggtgg 2096
>dbj|AK159637.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026L14 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 3185 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 catgtttgggaagcaggtgg 260 |||||||||||||||||||| Sbjct: 3089 catgtttgggaagcaggtgg 3070
>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11, complete sequence Length = 211986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 107534 ataaagacagtaaaatcact 107515
>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16, complete sequence Length = 256605 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 98567 taaagacagtaaaatcactg 98586
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 57143 ataaagacagtaaaatcact 57124
>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence Length = 230018 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 12674 gccaatctggagaacttggc 12693
>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16, complete sequence Length = 191052 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 103829 taaagacagtaaaatcactg 103848
>ref|XM_393050.2| PREDICTED: Apis mellifera similar to importin alpha S2 (LOC409543), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ttgcagtttgaagctgcttg 357 |||||||||||||||||||| Sbjct: 545 ttgcagtttgaagctgcttg 564
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 20867526 cagcaggcagcagcactgca 20867507
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 17439021 cagcaggcagcagcactgca 17439040
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5, complete sequence Length = 160041 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 24135 taaagacagtaaaatcactg 24154
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 52887 ataaagacagtaaaatcact 52868
>emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in linkage group 22, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 22678 ataaagacagtaaaatcact 22659
>emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in linkage group 2, complete sequence Length = 194313 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 77764 ataaagacagtaaaatcact 77783
>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12, complete sequence Length = 177468 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 160908 ataaagacagtaaaatcact 160927
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cagcaggcagcagcactgca 188 |||||||||||||||||||| Sbjct: 51018 cagcaggcagcagcactgca 51037
>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19, complete sequence Length = 104035 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 9219 ataaagacagtaaaatcact 9200
>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence Length = 198627 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 12937 ataaagacagtaaaatcact 12918
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence Length = 267826 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 265392 ataaagacagtaaaatcact 265373
>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19, complete sequence Length = 175656 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 3195 ataaagacagtaaaatcact 3214
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4, complete sequence Length = 127818 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 17215 ataaagacagtaaaatcact 17196
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 158969 ataaagacagtaaaatcact 158988
>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete sequence Length = 231807 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 155813 ataaagacagtaaaatcact 155794
>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18, complete sequence Length = 188895 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 105654 ataaagacagtaaaatcact 105673
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 214669 ataaagacagtaaaatcact 214688
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19, complete sequence Length = 190702 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 99197 taaagacagtaaaatcactg 99216
>emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in linkage group 11, complete sequence Length = 90503 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 33456 ataaagacagtaaaatcact 33475
>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23, complete sequence Length = 89377 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 26738 ataaagacagtaaaatcact 26757
>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence Length = 182526 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 135883 ataaagacagtaaaatcact 135864
>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5, complete sequence Length = 82272 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 76618 ataaagacagtaaaatcact 76637
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 316 cactgaagtccttctcgccagcttgcag 343 |||||||| ||||||| ||||||||||| Sbjct: 71621 cactgaagaccttctccccagcttgcag 71594
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 158653 ataaagacagtaaaatcact 158672
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 167130 taaagacagtaaaatcactg 167149
>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16, complete sequence Length = 180576 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 20534 ataaagacagtaaaatcact 20553
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18, complete sequence Length = 152902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 122488 taaagacagtaaaatcactg 122507
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16, complete sequence Length = 237124 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 67469 taaagacagtaaaatcactg 67450
>emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, complete sequence Length = 24458 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 taaagacagtaaaatcactg 42 |||||||||||||||||||| Sbjct: 20964 taaagacagtaaaatcactg 20945
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence Length = 169046 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ataaagacagtaaaatcact 41 |||||||||||||||||||| Sbjct: 126149 ataaagacagtaaaatcact 126168
>gb|L25338.1|MUSFBP Mus musculus folate-binding protein gene, 5' end Length = 1565 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaatctggagaacttggc 229 |||||||||||||||||||| Sbjct: 582 gccaatctggagaacttggc 601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,641,553 Number of Sequences: 3902068 Number of extensions: 3641553 Number of successful extensions: 73341 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72974 Number of HSP's gapped (non-prelim): 365 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
