Clone Name | rbastl42e10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PWP1_YEAST (P21304) Periodic tryptophan protein 1 | 30 | 2.0 | 2 | CCG1_MOUSE (O70578) Voltage-dependent calcium channel gamma-1 su... | 28 | 5.7 | 3 | NAS31_CAEEL (Q7JLI1) Zinc metalloproteinase nas-31 precursor (EC... | 28 | 5.7 | 4 | ZN267_HUMAN (Q14586) Zinc finger protein 267 (Zinc finger protei... | 27 | 9.8 |
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>PWP1_YEAST (P21304) Periodic tryptophan protein 1| Length = 576 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -1 Query: 276 TSIVKSHHPMVYTQVRHEEYTRPFIYSCSVIHVGRLLNVSAHNPARS 136 T + +HH + H +Y R + S S H +L ++++ N ARS Sbjct: 278 TGHITTHHTDAVLSMAHNKYFRSVLASTSADHTVKLWDLNSGNAARS 324
>CCG1_MOUSE (O70578) Voltage-dependent calcium channel gamma-1 subunit| (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel gamma subunit) Length = 223 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -1 Query: 303 LLITDPL*MTSIVKSHHPMVYTQVRHEEYTRPFIYSCSVIHVGR----LLNVSAHNPARS 136 +L+ L M ++V H ++ + H T C H G V+ HN +S Sbjct: 16 ILVGGVLAMVAVVTDHWAVLSPHLEHHNET------CEAAHFGLWRICTARVAVHNKDKS 69 Query: 135 CEH 127 CEH Sbjct: 70 CEH 72
>NAS31_CAEEL (Q7JLI1) Zinc metalloproteinase nas-31 precursor (EC 3.4.24.21)| (Nematode astacin 31) Length = 611 Score = 28.1 bits (61), Expect = 5.7 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Frame = +1 Query: 34 STTTLSFKQRQ*YK--YFPKYSLGLHMINLINRVLT----------ATSW--IVC*NIQQ 171 + +T S +RQ Y+ Y+P + G + +R T W + C NI Q Sbjct: 149 TVSTASRARRQAYRDRYYPSTTWGSSVYYYYDRTATPKIVKAFEQAVAFWQNVTCINIMQ 208 Query: 172 TTNMNNRTRVNKGSG 216 ++ NR RV KG G Sbjct: 209 SSTAINRIRVFKGQG 223
>ZN267_HUMAN (Q14586) Zinc finger protein 267 (Zinc finger protein HZF2)| Length = 743 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 301 AYHRPFINDKHRQVASSDG-LYSSSARRVHQTLYLLLFCYSCWSFAECF 158 +Y FI +K+ +S+ L SS+ + HQ Y L Y C F E F Sbjct: 205 SYRNVFIGEKNYHCNNSEKTLNQSSSPKNHQENYFLEKQYKCKEFEEVF 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,764,643 Number of Sequences: 219361 Number of extensions: 772872 Number of successful extensions: 1532 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1532 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)