>gb|CP000121.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence
          Length = 300758

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 54    aaagatatcgctgacatca 72
             |||||||||||||||||||
Sbjct: 64820 aaagatatcgctgacatca 64838

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     ctcaaaccattgatggcta 40
              |||||||||||||||||||
Sbjct: 599257 ctcaaaccattgatggcta 599239

>gb|AY173953.1| HIV-1 isolate US2 from USA, complete genome
          Length = 9018

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   ctatagaaactacagcaaa 56
            |||||||||||||||||||
Sbjct: 7694 ctatagaaactacagcaaa 7676

>gb|DQ108710.1| Arabidopsis thaliana clone 121671 mRNA sequence
          Length = 528

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 17  ctgccctcaaaccattgat 35
           |||||||||||||||||||
Sbjct: 452 ctgccctcaaaccattgat 470

>dbj|AB073164.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:T2N12
          Length = 87081

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ctgccctcaaaccattgat 35
             |||||||||||||||||||
Sbjct: 70719 ctgccctcaaaccattgat 70701

>gb|AF070521.1|AF070521 HIV-1 E9 from the USA, complete genome
          Length = 9699

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   ctatagaaactacagcaaa 56
            |||||||||||||||||||
Sbjct: 8317 ctatagaaactacagcaaa 8299

>gb|L42371.1|HIVGP160EN Human immunodeficiency virus type 1 envelope glycoprotein gp160 gene,
            complete cds
          Length = 2565

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   ctatagaaactacagcaaa 56
            |||||||||||||||||||
Sbjct: 2107 ctatagaaactacagcaaa 2089

>gb|L14573.1|HIV1US1X Human immunodeficiency virus type 1 (US1) envelope glycoprotein (env)
            gene, tat gene, vpu gene, rev gene, and nef gene
          Length = 3092

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 38   ctatagaaactacagcaaa 56
            |||||||||||||||||||
Sbjct: 2366 ctatagaaactacagcaaa 2348

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 38.2 bits (19), Expect = 3.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 22      ctcaaaccattgatggcta 40
               |||||||||||||||||||
Sbjct: 1021550 ctcaaaccattgatggcta 1021568


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 736,400
Number of Sequences: 3902068
Number of extensions: 736400
Number of successful extensions: 51676
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51639
Number of HSP's gapped (non-prelim): 37
length of query: 90
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 69
effective length of database: 17,151,101,840
effective search space: 1183426026960
effective search space used: 1183426026960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)