ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 165 1e-37
2dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 1e-37
3dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 1e-37
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 165 1e-37
5emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 165 1e-37
6dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 3e-35
7gb|AY109575.1| Zea mays CL1708_1 mRNA sequence 151 2e-33
8dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07,... 46 0.081
9gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 44 0.32
10gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform ... 42 1.3
11gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, comple... 42 1.3
12gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence 40 5.0
13gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete... 40 5.0
14gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromos... 40 5.0
15gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 5.0
16gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 5.0
17gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome... 40 5.0
18emb|AL603703.10| Human DNA sequence from clone RP11-773D16 on ch... 40 5.0
19emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chr... 40 5.0
20emb|AL157893.16| Human DNA sequence from clone RP11-322M19 on ch... 40 5.0
21emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes 40 5.0
22emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 40 5.0
23gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 5.0
24gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, comp... 40 5.0
25gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653... 40 5.0
26gb|AF130084.1|AF130084 Homo sapiens clone FLB8310 PRO2225 mRNA, ... 40 5.0
27gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, r... 40 5.0
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
29gb|AF244565.1|AF244565 Takakia lepidozioides ribulose-bisphospha... 40 5.0
30dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
31dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.0
32emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 40 5.0
33emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 i... 40 5.0
34gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer... 40 5.0
35gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 5.0
36gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV... 40 5.0
37gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 5.0
38gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.0
39gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s... 40 5.0
40gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 5.0
41gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 5.0
42emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chr... 40 5.0
43dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, o... 40 5.0
44emb|AL132656.15|HSA119F19 Human DNA sequence from clone RP11-119... 40 5.0 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  165 bits (83), Expect = 1e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                            
Query: 263      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21699747 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21699688

                                                                       
Query: 323      accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
                |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 21699687 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 21699633



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 172      atgaatcaaaatgtgcccaactcctgatgtcagg 205
                |||||||||||| |||||||||||||||||||||
Sbjct: 21699835 atgaatcaaaatatgcccaactcctgatgtcagg 21699802



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 29       atattgatctctcttgtcatctaca 53
                |||||||||||||||||||||||||
Sbjct: 21699993 atattgatctctcttgtcatctaca 21699969



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 333      tgtcatccttgatgaagggctgctccag 360
                |||||| |||||||||||| ||||||||
Sbjct: 21698816 tgtcattcttgatgaagggttgctccag 21698789
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>dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C06, full
            insert sequence
          Length = 1368

 Score =  165 bits (83), Expect = 1e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                        
Query: 263  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
            |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 1101 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 1042

                                                                   
Query: 323  accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 1041 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 987



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 172  atgaatcaaaatgtgcccaactcctgatgtcagg 205
            |||||||||||| |||||||||||||||||||||
Sbjct: 1189 atgaatcaaaatatgcccaactcctgatgtcagg 1156



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 29   atattgatctctcttgtcatctaca 53
            |||||||||||||||||||||||||
Sbjct: 1347 atattgatctctcttgtcatctaca 1323



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 333 tgtcatccttgatgaagggctgctccag 360
           |||||| |||||||||||| ||||||||
Sbjct: 308 tgtcattcttgatgaagggttgctccag 281
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>dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C08, full
           insert sequence
          Length = 404

 Score =  165 bits (83), Expect = 1e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                       
Query: 263 aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
           |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 137 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 78

                                                                  
Query: 323 accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
           |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 77  accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 23



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 172 atgaatcaaaatgtgcccaactcctgatgtcagg 205
           |||||||||||| |||||||||||||||||||||
Sbjct: 225 atgaatcaaaatatgcccaactcctgatgtcagg 192



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 29  atattgatctctcttgtcatctaca 53
           |||||||||||||||||||||||||
Sbjct: 383 atattgatctctcttgtcatctaca 359
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  165 bits (83), Expect = 1e-37
 Identities = 107/115 (93%)
 Strand = Plus / Minus

                                                                            
Query: 263      aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
                |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 21628092 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 21628033

                                                                       
Query: 323      accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
                |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 21628032 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 21627978



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                  
Query: 172      atgaatcaaaatgtgcccaactcctgatgtcagg 205
                |||||||||||| |||||||||||||||||||||
Sbjct: 21628180 atgaatcaaaatatgcccaactcctgatgtcagg 21628147



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 29       atattgatctctcttgtcatctaca 53
                |||||||||||||||||||||||||
Sbjct: 21628338 atattgatctctcttgtcatctaca 21628314



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 333      tgtcatccttgatgaagggctgctccag 360
                |||||| |||||||||||| ||||||||
Sbjct: 21627161 tgtcattcttgatgaagggttgctccag 21627134
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  165 bits (83), Expect = 1e-37
 Identities = 107/115 (93%)
 Strand = Plus / Plus

                                                                          
Query: 263    aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
              |||||||||||||||||||||||||| ||    ||||||||||||||||| |||||||||
Sbjct: 112804 aacctccgtaccttgatgttctccccaagggtggcgatcgtctccttcacaagatccttc 112863

                                                                     
Query: 323    accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
              |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 112864 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 112918



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                
Query: 172    atgaatcaaaatgtgcccaactcctgatgtcagg 205
              |||||||||||| |||||||||||||||||||||
Sbjct: 112716 atgaatcaaaatatgcccaactcctgatgtcagg 112749



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 29     atattgatctctcttgtcatctaca 53
              |||||||||||||||||||||||||
Sbjct: 112558 atattgatctctcttgtcatctaca 112582



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 333    tgtcatccttgatgaagggctgctccag 360
              |||||| |||||||||||| ||||||||
Sbjct: 113735 tgtcattcttgatgaagggttgctccag 113762
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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score =  157 bits (79), Expect = 3e-35
 Identities = 106/115 (92%)
 Strand = Plus / Minus

                                                                        
Query: 263  aacctccgtaccttgatgttctcccccagaccagcgatcgtctccttcacgagatccttc 322
            |||||||||||||||||||||||||| ||    ||||||||||||| ||| |||||||||
Sbjct: 3594 aacctccgtaccttgatgttctccccaagggtggcgatcgtctcctccacaagatccttc 3535

                                                                   
Query: 323  accgtcttgctgtcatccttgatgaagggctgctccaggagggccatcacgccga 377
            |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 3534 accgtcttgctgtcatccttgatgaaaggctgctccaggagggccagcacgccga 3480



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 172  atgaatcaaaatgtgcccaactcctgatgtcagg 205
            |||||||||||| |||||||||||||||||||||
Sbjct: 3682 atgaatcaaaatatgcccaactcctgatgtcagg 3649



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 29   atattgatctctcttgtcatctaca 53
            |||||||||||||||||||||||||
Sbjct: 3840 atattgatctctcttgtcatctaca 3816



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 333  tgtcatccttgatgaagggctgctccag 360
            |||||| |||||||||||| ||||||||
Sbjct: 2801 tgtcattcttgatgaagggttgctccag 2774
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>gb|AY109575.1| Zea mays CL1708_1 mRNA sequence
          Length = 2612

 Score =  151 bits (76), Expect = 2e-33
 Identities = 118/132 (89%)
 Strand = Plus / Minus

                                                                        
Query: 234  atcagttttcgccgagggtatacctgacaaacctccgtaccttgatgttctcccccagac 293
            ||||||| ||||| ||||| |||| |||||||||||| ||||| ||||||||||| ||  
Sbjct: 2362 atcagttctcgcccagggtgtaccggacaaacctccgcaccttaatgttctccccgagtg 2303

                                                                        
Query: 294  cagcgatcgtctccttcacgagatccttcaccgtcttgctgtcatccttgatgaagggct 353
              |||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 2302 aggcgaccgtctccttcacgagatccttcaccgtcttgctgtcgtccttgatgtagggct 2243

                        
Query: 354  gctccaggaggg 365
            ||||||||||||
Sbjct: 2242 gctccaggaggg 2231



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 98   agtaacaggtgatacaaaattatacatggaaccgagt 134
            |||||||||||||||  ||||| | ||||||||||||
Sbjct: 2519 agtaacaggtgatacggaattacagatggaaccgagt 2483
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>dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07, map 22, complete
              sequences
          Length = 184809

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 170    tgatgaatcaaaatgtgcccaac 192
              |||||||||||||||||||||||
Sbjct: 133851 tgatgaatcaaaatgtgcccaac 133873
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 146     caaactagcaacagctatgcat 167
               ||||||||||||||||||||||
Sbjct: 2205587 caaactagcaacagctatgcat 2205608
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>gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform mRNA, complete cds
          Length = 4020

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 340 cttgatgaagggctgctccaggagg 364
           |||||||||||| ||||||||||||
Sbjct: 903 cttgatgaagggatgctccaggagg 879
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>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence
          Length = 121286

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 340   cttgatgaagggctgctccaggagg 364
             |||||||||||| ||||||||||||
Sbjct: 45451 cttgatgaagggatgctccaggagg 45475
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>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence
          Length = 186611

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    tcatccttgatgaagggctg 354
              ||||||||||||||||||||
Sbjct: 136263 tcatccttgatgaagggctg 136244
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>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence
          Length = 170718

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agtacaactgagtacaaact 151
             ||||||||||||||||||||
Sbjct: 13521 agtacaactgagtacaaact 13502
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>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete
              sequence
          Length = 221731

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tttcatggacaatatattga 35
              ||||||||||||||||||||
Sbjct: 156055 tttcatggacaatatattga 156036
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    tccttgatgaagggctgctc 357
              ||||||||||||||||||||
Sbjct: 692770 tccttgatgaagggctgctc 692751
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     tcatccttgatgaagggctg 354
               ||||||||||||||||||||
Sbjct: 2022323 tcatccttgatgaagggctg 2022304
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>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence
          Length = 235095

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   gtgatacaaaattatacatg 125
             ||||||||||||||||||||
Sbjct: 59225 gtgatacaaaattatacatg 59206
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>emb|AL603703.10| Human DNA sequence from clone RP11-773D16 on chromosome 10 Contains the
             3' end of novel gene, a novel gene and a novel pseudogene,
             complete sequence
          Length = 135183

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttcatggacaatatattga 35
             ||||||||||||||||||||
Sbjct: 81265 tttcatggacaatatattga 81246
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>emb|AL355334.26| Human DNA sequence from clone RP11-399L7 on chromosome 10 Contains the
             cathepsin L-like 1 (CTSLL1) pseudogene, a novel gene, a
             pseudogene similar to part of ring finger protein 3
             (RNF3), the 5' end of the MINPP1 gene for multiple
             inositol polyphosphate histidine phosphatase 1 and a CpG
             island, complete sequence
          Length = 173390

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tttcatggacaatatattga 35
             ||||||||||||||||||||
Sbjct: 89569 tttcatggacaatatattga 89588
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>emb|AL157893.16| Human DNA sequence from clone RP11-322M19 on chromosome 10 Contains the
             gene for a novel protein highly similar to KIAA2020, two
             novel genes and a CpG island, complete sequence
          Length = 162286

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttcatggacaatatattga 35
             ||||||||||||||||||||
Sbjct: 78240 tttcatggacaatatattga 78221
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>emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes
          Length = 1124

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 333 tgtcatccttgatgaagggctgctccag 360
           |||| ||||||| |||||||||||||||
Sbjct: 763 tgtcgtccttgacgaagggctgctccag 736
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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
              sequence
          Length = 192919

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    atgatgaatcaaaatgtgcc 188
              ||||||||||||||||||||
Sbjct: 105574 atgatgaatcaaaatgtgcc 105593
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   atacaaaattatacatggaa 128
             ||||||||||||||||||||
Sbjct: 20012 atacaaaattatacatggaa 20031
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>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence
          Length = 171739

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    atacaaaattatacatggaa 128
              ||||||||||||||||||||
Sbjct: 138397 atacaaaattatacatggaa 138416
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>gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653B10, complete sequence
          Length = 170392

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tcatggacaatatattgatc 37
             ||||||||||||||||||||
Sbjct: 68532 tcatggacaatatattgatc 68551
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>gb|AF130084.1|AF130084 Homo sapiens clone FLB8310 PRO2225 mRNA, complete cds
          Length = 2296

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 16  tttcatggacaatatattga 35
           ||||||||||||||||||||
Sbjct: 211 tttcatggacaatatattga 230
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>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone
              BACR20E20, complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    agtacaactgagtacaaact 151
              ||||||||||||||||||||
Sbjct: 163386 agtacaactgagtacaaact 163367
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      ggtttggaaccaggaacgat 97
               ||||||||||||||||||||
Sbjct: 6355298 ggtttggaaccaggaacgat 6355279
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>gb|AF244565.1|AF244565 Takakia lepidozioides ribulose-bisphosphate carboxylase large
           subunit gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 1200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 19  catggacaatatattgatctctct 42
           ||||| ||||||||||||||||||
Sbjct: 274 catgggcaatatattgatctctct 251
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     ggtttggaaccaggaacgat 97
              ||||||||||||||||||||
Sbjct: 126364 ggtttggaaccaggaacgat 126345
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 333    tgtcatccttgatgaagggctgctccag 360
              |||| ||||||| |||||||||||||||
Sbjct: 821364 tgtcgtccttgacgaagggctgctccag 821391
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    acaaactagcaacagctatg 164
              ||||||||||||||||||||
Sbjct: 181005 acaaactagcaacagctatg 181024
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>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5,
             complete sequence
          Length = 184417

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   acaaactagcaacagctatg 164
             ||||||||||||||||||||
Sbjct: 69372 acaaactagcaacagctatg 69353
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>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211603

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    caaacctccgtaccttgatgttct 284
              ||||||||| ||||||||||||||
Sbjct: 188425 caaacctccctaccttgatgttct 188402
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    caaacctccgtaccttgatgttct 284
              ||||||||| ||||||||||||||
Sbjct: 109844 caaacctccctaccttgatgttct 109821
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>gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV-damaged DNA binding
           protein (repE) gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 101 aacaggtgatacaaaattatacat 124
           ||||| ||||||||||||||||||
Sbjct: 373 aacagttgatacaaaattatacat 350
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>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete
             sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agtacaactgagtacaaact 151
             ||||||||||||||||||||
Sbjct: 90643 agtacaactgagtacaaact 90624
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 333    tgtcatccttgatgaagggctgctccag 360
              |||| ||||||| |||||||||||||||
Sbjct: 492444 tgtcgtccttgacgaagggctgctccag 492471
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>gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s DS07528 (D169) and DS06665
             (D220)), complete sequence
          Length = 79248

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agtacaactgagtacaaact 151
             ||||||||||||||||||||
Sbjct: 67887 agtacaactgagtacaaact 67868
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 261    caaacctccgtaccttgatgttct 284
              ||||||||| ||||||||||||||
Sbjct: 160269 caaacctccctaccttgatgttct 160292
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gtgatacaaaattatacatg 125
             ||||||||||||||||||||
Sbjct: 66679 gtgatacaaaattatacatg 66698
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>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   caactgagtacaaactagca 155
             ||||||||||||||||||||
Sbjct: 79655 caactgagtacaaactagca 79674
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>dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, orf4, orf5 genes for
            thiocyanate hydrolase gamma subunit, thiocyanate
            hydrolase activator, putative ABC transporter subunit,
            putative ABC transporter subunit, putative ABC
            transporter subunit, putative ABC transporter subunit,
            partial and complete cds
          Length = 4910

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  cgagatccttcaccgtcttg 331
            ||||||||||||||||||||
Sbjct: 2491 cgagatccttcaccgtcttg 2472
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>emb|AL132656.15|HSA119F19 Human DNA sequence from clone RP11-119F19 on chromosome 10, complete
              sequence
          Length = 153370

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tttcatggacaatatattga 35
              ||||||||||||||||||||
Sbjct: 101245 tttcatggacaatatattga 101226


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,054,565
Number of Sequences: 3902068
Number of extensions: 3054565
Number of successful extensions: 59161
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58941
Number of HSP's gapped (non-prelim): 213
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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