Clone Name | rbastl42d06 |
---|---|
Clone Library Name | barley_pub |
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 39.3 bits (90), Expect = 0.005 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 419 CEDPPWDSIPDRAYCCRWCSWCKVCSEDS 333 C DPP ++P + C+WC WC+ C S Sbjct: 1029 CLDPPLQTVPKGGWKCKWCVWCRHCGATS 1057
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 39.3 bits (90), Expect = 0.005 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 419 CEDPPWDSIPDRAYCCRWCSWCKVCSEDS 333 C DPP ++P + C+WC WC+ C S Sbjct: 1036 CLDPPLQTVPKGGWKCKWCVWCRHCGATS 1064
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 31.2 bits (69), Expect = 1.3 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -3 Query: 419 CEDPPWDSIPDRAYCCRWCSWCKVCSEDS 333 C DPP ++P + C+WC C C S Sbjct: 1181 CLDPPLLTVPKGGWKCKWCVSCMQCGAAS 1209
>ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2 (Protein FON)| Length = 403 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -1 Query: 319 VPLFFEAMESLIK*-VTGNLRMDIPSKLFSYEHTAVLFHG 203 VP A+ SL + V+ +R +P+ LF+Y HT L+HG Sbjct: 192 VPTRIPAIVSLSRGPVSPLVRFQLPNVLFAYAHTLALYHG 231
>ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2 (Protein FON)| Length = 399 Score = 29.3 bits (64), Expect = 4.9 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 265 LRMDIPSKLFSYEHTAVLFHG 203 +R +P+ LF+Y HT L+HG Sbjct: 206 VRFQLPNVLFAYAHTLALYHG 226
>MT2_CALSI (P55950) Metallothionein-2B (MT-2B) (Metallothionein-IIB) (MT-IIB)| [Contains: Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)] Length = 58 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = -3 Query: 455 EEKCKYGCAVSVCEDPPWDSIPDRAYCCRWCSWCKVCSE 339 E +CK GC C PP D C K CS+ Sbjct: 14 EGECKTGCKCKSCRCPPCDKCSSECKCTSKEECSKTCSK 52
>PXDC2_XENLA (Q6DE92) Plexin domain-containing protein 2 precursor| Length = 513 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 19/51 (37%) Frame = -3 Query: 365 CSWCKV-------------------CSEDSKQGVCASIL*SYGVSYQVSDG 270 CSWC + C+E+SK VC +L + G+S+ + G Sbjct: 331 CSWCNIPQRCSSGFDRHRQDWVENGCTEESKDTVCDDLLQTTGISHHTTTG 381
>POU1_BRARE (P31366) POU domain protein 1 (ZFPOU1)| Length = 425 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = +1 Query: 259 SLSYPSLT**ETP*LQRIEAQTPCLESSLHTLHQEHQRQQ*ALSGMESHGGSSQTDT 429 SL +P L +TP L S H H +HQ Q A G+ SH S DT Sbjct: 192 SLVHPGLVRGDTPELDH--------SSHHHHHHHQHQHHQQAHHGVNSHDPHSDEDT 240
>POU23_BRARE (P79745) POU domain protein ZP-23| Length = 443 Score = 28.5 bits (62), Expect = 8.4 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = +1 Query: 259 SLSYPSLT**ETP*LQRIEAQTPCLESSLHTLHQEHQRQQ*ALSGMESHGGSSQTDT 429 SL +P L +TP L S H H +HQ Q A G+ SH S DT Sbjct: 192 SLVHPGLVRGDTPELDH--------SSHHHHHHHQHQHHQQAHHGVNSHDPHSDEDT 240
>TRGS_TACTR (P81281) 8.6 kDa transglutaminase substrate| Length = 81 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = -3 Query: 446 CKYGCAVSVCEDPPWDSIPDRAYCCRWCSWCKVCS 342 C GC S C D + A C+ C +C C+ Sbjct: 6 CSVGCDTSYCPDTSSCNCGTFADYCKCCQYCNACA 40
>KRA58_HUMAN (O75690) Keratin-associated protein 5-8 (Keratin-associated protein| 5.8) (Ultrahigh sulfur keratin-associated protein 5.8) (Keratin, ultra high-sulfur matrix protein B) (UHS keratin B) (UHS KerB) Length = 187 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/43 (27%), Positives = 16/43 (37%) Frame = -3 Query: 446 CKYGCAVSVCEDPPWDSIPDRAYCCRWCSWCKVCSEDSKQGVC 318 C GC S C+ ++ CC+ CS C Q C Sbjct: 96 CSSGCGSSCCQSSCCKPCCSQSSCCKPCSCSSGCGSSCCQSSC 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,854,875 Number of Sequences: 219361 Number of extensions: 1257920 Number of successful extensions: 3633 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3493 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3627 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)