Clone Name | rbastl42d05 |
---|---|
Clone Library Name | barley_pub |
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 167 LIHHKMQ-PEASFFHSSVISSLDSNLATTYDAPNAMNLP 280 L HH+M P + FH S +SS S+ ATT +P+ P Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPSLCRHP 1250
>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)| Length = 390 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +2 Query: 137 HASHKITFRVLIHHKMQPEASFFHSSVISSLDSNLATTYDAP 262 H H + R I H +SF H+S + DSN +++ D P Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +2 Query: 185 QPEASFFHSSVISSLDSNLATTYDAPNAMNLPVNCKGSSSPSASCFAFLVETYGSS 352 +P + F + S L T Y A N+ +L + SS SAS F GSS Sbjct: 64 EPPTNSFERNYYDRTTSRLVTQYQANNSTSLANSNSSPSSVSASASVFATAAGGSS 119
>TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)| Length = 368 Score = 28.9 bits (63), Expect = 6.8 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +3 Query: 219 FLHWTATLRPHTMLQML*TYLSIVKARQVLQLRALLSSSR 338 F W RP +L ++ YL + +Q+L++R L SS+ Sbjct: 227 FFQWIGGFRPSELLNVVMPYLQPLTDQQILEVRNLQQSSQ 266
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = -3 Query: 324 AKHEAEGL--DEPLQLTGKFIAFGASYVVARLLSSEEMTLEWKKEASGCILWCMRTLNVI 151 A +E GL +E Q T KFI L + EMT W I+WC +T N I Sbjct: 374 ANNENVGLWSEERKQNTRKFIE--------AQLDAFEMTGGW-------IMWCYKTENSI 418 Query: 150 LWDA*NVVQ 124 WD ++Q Sbjct: 419 EWDVEKLIQ 427
>INSR_HUMAN (P06213) Insulin receptor precursor (EC 2.7.10.1) (IR) (CD220| antigen) [Contains: Insulin receptor alpha subunit; Insulin receptor beta subunit] Length = 1382 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +1 Query: 61 FNYIQD--HSKRTSIQMNCPQLVLDNISCIPQNNIQSSHTPQNATRSFLL---PF*CHFF 225 F++ QD H + S + C Q V+ N CIP+ + N + L P CH Sbjct: 283 FSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLL 342 Query: 226 TGQQPCDHI 252 G++ D + Sbjct: 343 EGEKTIDSV 351
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 40 PGQSVA*FNYIQDHSKRTSIQMNCPQLVLDNISCIPQNNIQ---SSHTPQ 180 P S+A +QDHS ++S + P+ ++ S P NI SS T Q Sbjct: 1777 PQDSLAQCKELQDHSNQSSFNFSSPESWVNTTSSTPYQNIPCNGSSRTAQ 1826
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -3 Query: 222 EMTLEWKKEASGCILWCMRTLNVILWDA*NVVQ 124 E L+ + G I+WC +T N I WD ++Q Sbjct: 395 EAQLDAFEMTGGWIMWCYKTENSIEWDVEKLIQ 427
>CHAC_ECOLI (P39163) Cation transport protein chaC| Length = 231 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 9/48 (18%) Frame = -3 Query: 261 GASYVVARLLSSEEMTLEWKKE-ASGCIL--WCM------RTLNVILW 145 G +Y + +E+TL WK+E +GC L WC RT+N I++ Sbjct: 106 GVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVF 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,349,882 Number of Sequences: 219361 Number of extensions: 1211085 Number of successful extensions: 3409 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3408 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)