>CH60_PORPU (P51349) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 528

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = -1

Query: 143 TQDAG*DVCTVCVDFNWAGSHVPVTRPRMIWINDGEQGTLAGRCDQI 3
           T+DAG  + TV +D       V VT+     I DG + T+  RC+QI
Sbjct: 302 TEDAGFSLDTVQLDMLGKARRVVVTKDSTTIIADGHEATVKSRCEQI 348

>LPQH_MYCAV (P46733) Lipoprotein lpqH precursor (19 kDa lipoprotein antigen)|
          Length = 161

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 101 NRHIRYIHPNPRLVSCLVTGLQ--DKNYPSLVTDARHQRSSPSSSFTGPPASSG 256
           NR +R+    P +++ +V+G    +K+ PS         SS SSS T P ASSG
Sbjct: 2   NRQLRFAVAGPEILAAVVSGCSSGNKSAPS---------SSASSSSTSPSASSG 46

>SUFI_ECOLI (P26648) Protein sufI precursor|
          Length = 470

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +2

Query: 116 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 295
           +  P+  LVS LV  L+      LVTD+   R  P+    G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDIS--LGDDPG-- 363

Query: 296 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 400
             +G LW  + ++       W++   R+   + + +
Sbjct: 364 -INGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHI 398

>SUFI_SALTY (P0A1C5) Protein sufI precursor|
          Length = 470

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +2

Query: 116 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 295
           +  P+  LVS LV  L+      LVTD    R  P+   +G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPTEIMSGAPVRSRDIS--LGDDPG-- 363

Query: 296 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 400
             +G LW  + ++       W++   R+   +++ +
Sbjct: 364 -INGQLWDVNRIDITAQQGTWERWTVRADMPQSFHI 398

>SUFI_SALTI (P0A1C6) Protein sufI precursor|
          Length = 470

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
 Frame = +2

Query: 116 YIHPNPRLVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 295
           +  P+  LVS LV  L+      LVTD    R  P+   +G P  S   S  L   PG  
Sbjct: 308 FFEPSSILVSTLVLTLRPTGLLPLVTDNLPMRLLPTEIMSGAPVRSRDIS--LGDDPG-- 363

Query: 296 SSSGDLW-ASSLEQVPSVSAWKQLAARSSSGKTWSV 400
             +G LW  + ++       W++   R+   +++ +
Sbjct: 364 -INGQLWDVNRIDITAQQGTWERWTVRADMPQSFHI 398

>CRH1_YEAST (P53301) Probable glycosidase CRH1 precursor (EC 3.2.-.-) (Congo|
           red hypersensitive protein 1)
          Length = 507

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = +2

Query: 140 VSCLVTGLQDKNYPSLVTDARHQRSS-PSSSFTGPPASSGA*SKMLRSGPGWLSSSGDLW 316
           VS  V+        S V+      SS  SSS T P +S+   SK L S     SSS    
Sbjct: 324 VSSTVSSSASSTVSSSVSSTVSSSSSVSSSSSTSPSSSTATSSKTLASSSVTTSSS---- 379

Query: 317 ASSLEQVPSVSAWKQLAARSSSGKTWSVLMDPS 415
            SS E+  S S+ K +A+ S+S    S    P+
Sbjct: 380 ISSFEKQSSSSSKKTVASSSTSESIISSTKTPA 412

>NFYA3_ARATH (Q93ZH2) Nuclear transcription factor Y subunit A-3 (AtNF-YA-3)|
           (Transcriptional activator HAP2C)
          Length = 340

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 19  PASVPCSPSLIQIIRGRVTGTWLPAQLKSTHTVHTS*PASCVVSRYRFTRQKL 177
           P +  C+P ++ +I GRV    LPA+L  T  V  +      + R R  R KL
Sbjct: 152 PQAPTCNPQMVSMIPGRVP---LPAELTETDPVFVNAKQYHAIMRRRQQRAKL 201

>OTC_RHOPA (Q6N0J0) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 310

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 318 AHRSPELDSQ--PGPDRSIFDQAPEEAGGPVKDDEGLLRWCLASV 190
           AHR  E+  +   GP   +FD+A       +   +G+L WCL +V
Sbjct: 269 AHRGEEVTDEVIDGPQSVVFDEAENR----LHAQKGILAWCLGAV 309

>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen|
           homolog)
          Length = 925

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = +2

Query: 125 PNPRLVSCLVTG---LQDKNYPSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWL 295
           P+P   SCLV     L D   P+ V +     +  S  F+ PP+S  + S     GP   
Sbjct: 391 PHPSFTSCLVPPAEPLPDTAQPA-VMETPVGDADASEGFSSPPSSLTSPSTPSSLGPSLS 449

Query: 296 SSSGDLWASSLEQVPSV 346
           S+SG   + SL  + S+
Sbjct: 450 STSGIGTSPSLRSLQSL 466

>MYPT1_MOUSE (Q9DBR7) Protein phosphatase 1 regulatory subunit 12A (Myosin|
           phosphatase-targeting subunit 1) (Myosin phosphatase
           target subunit 1)
          Length = 1004

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 137 LVSCLVTGLQDKNYPSLVTDARHQRSSPSSSFTG---PPASSGA*SKMLRSGPGWLSSS 304
           L+SC V        P++ + A  QRS PSS+ T    PP SS A ++   S   W   S
Sbjct: 562 LISCSVPSTTST--PTVTSAAGLQRSLPSSTSTAAKTPPGSSSAGTQSSTSNRLWAEDS 618

>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)|
          Length = 627

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 215 SPSSSFTGPPASSGA*SKMLRSGPGWLSSSGDLWASSLEQVPSVSAW 355
           +PS  F+    SSG       S  GW +SSG+ W +S     S S W
Sbjct: 581 APSGGFSSGGGSSGGWGNGGGSSGGWGNSSGN-WGNSSNSSNSNSGW 626

>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 870

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 212 SSPSSSFTGPPASSGA*SKMLRSGPGWLSSSGDLWASSLEQVPSV 346
           S P+    G P +SG  + +  S    LSSSG+L   S EQ+P V
Sbjct: 548 SDPAVHVPGTPGTSG--NSVTPSANSSLSSSGELGQPSGEQMPQV 590

>XYL1_CANPA (Q6Y0Z3) NADH-dependent D-xylose reductase (EC 1.1.1.175) (XR)|
          Length = 324

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 284 PGWLSSSGDLWASSLEQVPSVSAWKQLAARSSSGKTWSV 400
           PG+    GD W  S+E+VP +  W+ L      G   S+
Sbjct: 132 PGFYCGDGDKW--SIEEVPLLDTWRALEKLVDQGLAKSI 168

>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3|
          Length = 948

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = +2

Query: 179 PSLVTDARHQRSSPSSSFTGPPASSGA*SKMLRSGPGWLSSSGDLWASSLEQVPSVSAWK 358
           P L+ D   +   P++S    P S+ +  K   S P   SSS   W S        S   
Sbjct: 351 PQLIADPEPKPRKPATS--SKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLS 408

Query: 359 QLAARSSSG 385
            + +RS SG
Sbjct: 409 PVLSRSPSG 417


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,730,682
Number of Sequences: 219361
Number of extensions: 1393222
Number of successful extensions: 3922
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3907
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)