ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl42c11 |
|---|---|
| Clone Library Name | barley_pub |
>KLF13_HUMAN (Q9Y2Y9) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor NSLP1) (Novel Sp1-like zin Length = 288 Score = 36.6 bits (83), Expect = 0.028 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = +1 Query: 100 PPGTHQPRWKPGVAEVGVLGIYTDERKERTNHSICQKPMHKHKTHSAGRSHVKGRSLFLS 279 P +P +PG A G G+ R+ R+ + + P KHK H AG V G+S L Sbjct: 127 PEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADL-ESPQRKHKCHYAGCEKVYGKSSHLK 185 Query: 280 NHL 288 HL Sbjct: 186 AHL 188
>KLF13_MOUSE (Q9JJZ6) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Erythroid transcription factor FKLF-2) Length = 289 Score = 35.4 bits (80), Expect = 0.062 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Frame = +1 Query: 70 GGARQHSTRPPPGTHQPR----WKPGVAEVGVLGIYTDERKERTNHSICQKPMHKHKTHS 237 G A + P P +P +PG A G G+ R+ R+ + + P KHK H Sbjct: 114 GQAGAPAAPPSPAWSEPEAALEQEPGPAGSGEPGLRQRGRRGRSRADL-ESPQRKHKCHY 172 Query: 238 AGRSHVKGRSLFLSNHL 288 AG V G+S L HL Sbjct: 173 AGCEKVYGKSSHLKAHL 189
>RPGF3_RAT (Q9Z1C8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 884 Score = 32.7 bits (73), Expect = 0.40 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = +1 Query: 238 AGRSHVKGRSLFLSNHLLSS-PSSIRSPNTHLQAHRAAASGCRQENSCCTCTPGLHLHLP 414 A HV L HLL++ P+ IR HL+ HR SG + G+H Sbjct: 50 ATTEHVHKAGKLLYRHLLATYPTLIRDRKYHLRLHRQCCSGRELVDGILALGLGVHSRSQ 109 Query: 415 LVGYC 429 VG C Sbjct: 110 AVGIC 114
>TNP2_ECOLI (P06694) Transposase for transposon Tn21| Length = 988 Score = 31.2 bits (69), Expect = 1.2 Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Frame = +1 Query: 55 KGRNTGGARQHSTRPPPGTHQPRWKPGVAEVGVLGIYTDERKERTNHSICQKPMHKHKTH 234 +G NT AR+ P G +PRW+ V TD +R + +C K+ Sbjct: 419 RGMNTDNARKLPADAPTGFIKPRWQKLV--------MTDAGIDRAYYELCALSELKNSLR 470 Query: 235 SAGRSHVKGRSLFLS-NHLLSSPSSIRSPNTHLQAHRAAASGCRQ 366 S G V+G F L P S + A A+GC Q Sbjct: 471 S-GDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAVATGCEQ 514
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = +1 Query: 184 RTNHSICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCR 363 RT H++ H T S+ RSH + S + S+H SS S H +H A+S + Sbjct: 431 RTRHNL-----HGRSTTSSSRSHSRSPSSYSSSHSSSSSS-------HSSSHSHASSPVQ 478 Query: 364 QENSC 378 +C Sbjct: 479 SSGNC 483
>LAMC3_MOUSE (Q9R0B6) Laminin gamma-3 chain precursor (Laminin 12 gamma 3| subunit) Length = 1581 Score = 30.4 bits (67), Expect = 2.0 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Frame = -3 Query: 413 GKCRCNPGVQVQQLFSWRQPEAAALCACRCVFGLRIEEGDDKRWLDKNKDRPL---TCDL 243 G+C+CN S +P AA ACRC D +R L +DRP T + Sbjct: 278 GRCKCNGHA------SECEPNAAGQLACRCQH--NTTGVDCERCLPFFQDRPWARGTAED 329 Query: 242 PAECVLCLCIG 210 EC+ C C G Sbjct: 330 ANECLPCNCSG 340
>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 876 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = +1 Query: 238 AGRSHVKGRSLFLSNHLLSS-PSSIRSPNTHLQAHRAAASGCRQENSCCTCTPGLHLHLP 414 A HV L HLL++ P+ IR HL+ +R SG + G+H Sbjct: 50 ATTEHVHKAGKLLHRHLLATYPTLIRDRKYHLRLYRHCCSGRELVDGILALGLGVHSRSQ 109 Query: 415 LVGYC 429 VG C Sbjct: 110 AVGIC 114
>CPXP_BRAJA (Q59203) Cytochrome P450 BJ-1 (EC 1.14.14.-) (Cytochrome P450 112)| Length = 401 Score = 30.0 bits (66), Expect = 2.6 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -3 Query: 134 PGFHRGWWVPGGGRVECCLAPPVFRP 57 P H GWWV G + L+ FRP Sbjct: 39 PSGHEGWWVTGYDEAKAVLSDAAFRP 64
>THN1_WHEAT (P01544) Alpha-1-purothionin precursor (Purothionin A-II)| [Contains: Alpha-1-purothionin; Acidic protein] (Fragment) Length = 126 Score = 30.0 bits (66), Expect = 2.6 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Frame = -3 Query: 437 ES*QYPTKGKCRCNPGVQVQQLFSWR--QPEAAALCACRCVFGLRIEEGDDKRWLDKNKD 264 E Q K CR G L R Q A +C C+ GL +G K L+ N D Sbjct: 10 EQLQVEGKSCCRSTLGRNCYNLCRARGAQKLCAGVCRCKISSGLSCPKGFPKLALESNSD 69 Query: 263 RPLT---CDLPAECVLC 222 P T C+L +C Sbjct: 70 EPDTIEYCNLGCRSSVC 86
>NUDH_THICR (Q31GX8) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 165 Score = 29.6 bits (65), Expect = 3.4 Identities = 30/81 (37%), Positives = 36/81 (44%), Gaps = 9/81 (11%) Frame = -3 Query: 302 EGDDKRWLDKNKDRPLTCDLPAECVLC----LCIGF*HMEWFVLSFLSSVYIPSTPTSAT 135 E D R L + KD LT DLP + +CIG + WF+L LS + T T Sbjct: 61 EPSDVRVLGRTKDW-LTYDLPKHLIRHYSQPVCIGQKQI-WFLLGMLSDDEKINLNTHET 118 Query: 134 PGFHRGW-----WVPGGGRVE 87 P F GW WVP VE Sbjct: 119 PEF-EGWSWVDYWVPVQNVVE 138
>THN2_WHEAT (P32032) Alpha-2-purothionin precursor [Contains:| Alpha-2-purothionin; Acidic protein] Length = 136 Score = 29.6 bits (65), Expect = 3.4 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Frame = -3 Query: 437 ES*QYPTKGKCRCNPGVQVQQLFSWR--QPEAAALCACRCVFGLRIEEGDDKRWLDKNKD 264 E Q K CR G L R Q + +C C+ GL +G K L+ N D Sbjct: 21 EQVQVEGKSCCRTTLGRNCYNLCRSRGAQKLCSTVCRCKLTSGLSCPKGFPKLALESNSD 80 Query: 263 RPLT---CDLPAECVLC 222 P T C+L +C Sbjct: 81 EPDTIEYCNLGCRSSVC 97
>TJAP1_MOUSE (Q9DCD5) Tight junction-associated protein 1 (Tight junction| protein 4) (Protein incorporated later into tight junctions) Length = 539 Score = 29.6 bits (65), Expect = 3.4 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%) Frame = +1 Query: 85 HSTRPPPGTHQPRWKPGVAEVGVLGIYTDERKERTNHSICQK-------PMHKHKTHSAG 243 HST PPP H+ R AE G DE +E N + + P + ++G Sbjct: 435 HSTAPPPSPHRERGLVLPAEPD-SGFPQDEEEEMLNLPVSPEEERQSLLPDKEGTEEASG 493 Query: 244 RSHVKGRS 267 SHV GR+ Sbjct: 494 PSHVDGRA 501
>ADCY7_MOUSE (P51829) Adenylate cyclase type 7 (EC 4.6.1.1) (Adenylate cyclase| type VII) (ATP pyrophosphate-lyase 7) (Adenylyl cyclase 7) Length = 1099 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 199 WNGLFFLFFRLYIYQVLLPLQRRASIAAG 113 W + F F +++ LLPL RRA+I G Sbjct: 123 WEQVPFFLFVVFVVYALLPLSRRAAIVVG 151
>CPXP_RHISN (P55544) Cytochrome P450 BJ-1 homolog (EC 1.14.14.-)| Length = 400 Score = 29.3 bits (64), Expect = 4.4 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = -3 Query: 134 PGFHRGWWVPGGGRVECCLAPPVFRP 57 P H GWWV G + L+ FRP Sbjct: 38 PRGHEGWWVTGYDEAKAVLSDAAFRP 63
>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum| protein MSE55) Length = 391 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = +1 Query: 160 IYTDERKERTNHSICQKPM--HKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHL 330 + + + K R + P+ +H H V G + FLSNH SS S+ RSP + L Sbjct: 24 VSSSQGKRRLTADMISHPLGDFRHTMHVGRGGDVFGDTSFLSNHGGSSGSTHRSPRSFL 82
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 29.3 bits (64), Expect = 4.4 Identities = 30/126 (23%), Positives = 38/126 (30%), Gaps = 7/126 (5%) Frame = +1 Query: 46 YSGKGRNTGGARQHSTRPPPGT-------HQPRWKPGVAEVGVLGIYTDERKERTNHSIC 204 + G G GG H PG H+P PG G G + H Sbjct: 801 HEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHG--GPHGHRPHDVPGHRGHDHR 858 Query: 205 QKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCCT 384 P H+H+ H G H S R H CR EN+C Sbjct: 859 GPPPHEHRGHDGPGHGGGGHRGHDGGHNHGGDMSKRPVCRHFMMK----GNCRYENNCAF 914 Query: 385 CTPGLH 402 PG++ Sbjct: 915 YHPGVN 920
>DERM_HUMAN (Q07507) Dermatopontin precursor (Tyrosine-rich acidic matrix| protein) (TRAMP) Length = 201 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = -3 Query: 380 QQLFSWRQPEAAALCACRCVFGLRIEEGDDKRWLDKNKDRPLTCDLPAEC 231 +Q FS++ P+ + A R +F + EG D++W P + P EC Sbjct: 43 RQGFSYQCPQGQVIVAVRSIFSKK--EGSDRQWNYACMPTPQSLGEPTEC 90
>JAG1_RAT (Q63722) Jagged-1 precursor (Jagged1) (CD339 antigen)| Length = 1219 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%) Frame = +1 Query: 199 ICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSC 378 +C K ++ TH + + + S P PN + H + C SC Sbjct: 292 LCDKDLNYCGTHQPCLNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSC 351 Query: 379 --------CTCTPG 396 C C+PG Sbjct: 352 KETSSGFECECSPG 365
>GLI3_XENLA (Q91660) Zinc finger protein GLI3 (Neural-specific DNA-binding| protein xGLI3) (xGLI-3) Length = 1569 Score = 28.9 bits (63), Expect = 5.8 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 12/117 (10%) Frame = +1 Query: 94 RPPP----GTHQPRWKPGVAEVGVLGIYTDERKERTNHSIC--------QKPMHKHKTHS 237 RPPP G+H PG G+ G + D + H C +KPM + Sbjct: 654 RPPPPREPGSHSQSRSPGQQTQGIHGEHKDLSNTTSKHEECLQVRSVKTEKPMSSQPS-P 712 Query: 238 AGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCCTCTPGLHLH 408 G+S + +SN+ S + + A +++ T T GL LH Sbjct: 713 GGKSSCSRQQSPISNYTNSGIELNLNSGGSIGDFSALDETPIMDSTISTATTGLGLH 769
>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 888 Score = 28.9 bits (63), Expect = 5.8 Identities = 29/121 (23%), Positives = 40/121 (33%), Gaps = 2/121 (1%) Frame = +1 Query: 46 YSGKGRNTGGARQHSTRPPPGTHQPRWKPGVAEVGVLGIYTDERKERTNHSICQKPMHKH 225 + G G N GG+ H + PG P G + H P H+H Sbjct: 782 HDGPGGNMGGSGGHRSHEGPGHGGPH-----------GHRPHDVPSHRGHDHRGPPPHEH 830 Query: 226 KTHSA--GRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCCTCTPGL 399 + H G H +G H S N + H CR EN+C PG+ Sbjct: 831 RGHDGHGGGGH-RGHD---GGHSHGGDMS----NRPVCRHFMMKGNCRYENNCAFYHPGV 882 Query: 400 H 402 + Sbjct: 883 N 883
>RPGF3_HUMAN (O95398) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) (Rap1 guanine-nucleotide-exchange factor directly activated by cAMP) Length = 881 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +1 Query: 274 LSNHLLSS-PSSIRSPNTHLQAHRAAASGCRQENSCCTCTPGLHLHLPLVGYC 429 L HLL++ P+ IR HL+ +R SG + G+H +VG C Sbjct: 62 LHRHLLATCPNLIRDRKYHLRLYRQCCSGRELVDGILALGLGVHSRSQVVGIC 114
>JAG1_MOUSE (Q9QXX0) Jagged-1 precursor (Jagged1) (CD339 antigen)| Length = 1218 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%) Frame = +1 Query: 199 ICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSC 378 +C K ++ TH + + + S P PN + H + C SC Sbjct: 292 LCDKDLNYCGTHQPCLNRGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSC 351 Query: 379 --------CTCTPG 396 C C+PG Sbjct: 352 KETSSGFECECSPG 365
>CGAT1_HUMAN (Q8TDX6) Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1| (EC 2.4.1.174) (beta4GalNAcT-1) Length = 532 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +1 Query: 103 PGTHQPRWKPGVAEVGVLGIYTDERKERTNHSICQKPMHKHK 228 P + P +P A + GIY ER + T + + K HKH+ Sbjct: 194 PAENSPNHRPYTASDFIEGIYRTERDKGTLYELTFKGDHKHE 235
>GATA2_MOUSE (O09100) Endothelial transcription factor GATA-2 (GATA-binding| protein 2) Length = 480 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/87 (24%), Positives = 35/87 (40%) Frame = +1 Query: 127 KPGVAEVGVLGIYTDERKERTNHSICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSS 306 +PG+A +G + T+H P+ + ++ +H G SLF L P+S Sbjct: 230 RPGLATMGT--------QPATHH-----PIPTYPSYVPAAAHDYGSSLFHPGGFLGGPAS 276 Query: 307 IRSPNTHLQAHRAAASGCRQENSCCTC 387 +P R+ A C + C C Sbjct: 277 SFTPK-----QRSKARSCSEGRECVNC 298
>CNC_DROME (P20482) Segmentation protein cap'n'collar| Length = 1383 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/59 (27%), Positives = 25/59 (42%) Frame = +1 Query: 193 HSICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQE 369 H Q PMH H++H HV G P ++ + HLQ+ + G +Q+ Sbjct: 1321 HVPTQAPMHSHQSHGMQAQHVVGGMSQQQQQQSRLPPHLQQQH-HLQSQQQQPGGQQQQ 1378
>DOF33_ARATH (Q8LFV3) Dof zinc finger protein DOF3.3 (AtDOF3.3) (H-protein| promoter-binding factor 2a) Length = 448 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +3 Query: 75 RQTTLNATTTGYPPAAMEARRCRGRSTWYIYRRKKRKNKPFHMSKA 212 +QTT + T P + RC+ T + Y N+P H KA Sbjct: 94 QQTTPDGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKA 139
>YHT4_YEAST (P38838) Hypothetical 30.6 kDa protein in ACT5-YCK1 intergenic| region Length = 269 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/84 (21%), Positives = 38/84 (45%) Frame = +2 Query: 62 ETPAAPDNTQRDHHRVPTSRDGSPALQR*EYLVYIQTKEKKEQTIPYVKSLCTNTRHTLR 241 ++P+A + R+P +P +Q+ + +Q+K KE + +K + + ++ Sbjct: 7 KSPSAKYHDMAGSQRIPHK---NPHIQK---VAVLQSKPNKEDALNLIKEIAHKVSYLMK 60 Query: 242 EDHMSRDGLYFYPTTSYRLLPRSV 313 E+H L + RLL +V Sbjct: 61 ENHFKVTNLVEFYPRDQRLLGMNV 84
>DERM_BOVIN (P19427) Dermatopontin (Tyrosine-rich acidic matrix protein)| (TRAMP) (22 kDa extracellular matrix protein) (Dermatan sulfate proteoglycan-associated protein 22K) Length = 183 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = -3 Query: 380 QQLFSWRQPEAAALCACRCVFGLRIEEGDDKRWLDKNKDRPLTCDLPAEC 231 +Q FS++ P + A R +F + EG D++W P + P EC Sbjct: 25 RQGFSYQCPHGQVVVAVRSIFNKK--EGSDRQWNYACMPTPQSLGEPTEC 72
>JAG1_HUMAN (P78504) Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen)| Length = 1218 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%) Frame = +1 Query: 199 ICQKPMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSC 378 +C K ++ TH + + + S P PN + H + C SC Sbjct: 292 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSC 351 Query: 379 --------CTCTPG 396 C C+PG Sbjct: 352 KETSLGFECECSPG 365
>DERM_MOUSE (Q9QZZ6) Dermatopontin precursor (Tyrosine-rich acidic matrix| protein) (TRAMP) (Early quiescence protein 1) (EQ-1) Length = 201 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = -3 Query: 380 QQLFSWRQPEAAALCACRCVFGLRIEEGDDKRWLDKNKDRPLTCDLPAEC 231 +Q FS++ P + A R +F + EG D++W P + P EC Sbjct: 43 RQGFSYQCPHGQVVVAVRSIFSKK--EGSDRQWNYACMPTPQSLGEPTEC 90
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 28.1 bits (61), Expect = 9.9 Identities = 28/124 (22%), Positives = 38/124 (30%), Gaps = 5/124 (4%) Frame = +1 Query: 46 YSGKGRNTGGARQHSTRPPPGT-----HQPRWKPGVAEVGVLGIYTDERKERTNHSICQK 210 + G G + GG+ H PG H+P PG H Sbjct: 832 HEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPG----------------HRGHDHRGP 875 Query: 211 PMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCCTCT 390 P H+H+ H G H S N + H CR EN+C Sbjct: 876 PPHEHRGHDGPGHGGGGHRGHDGGHSHGGDMS----NRPVCRHFMMKGNCRYENNCAFYH 931 Query: 391 PGLH 402 PG++ Sbjct: 932 PGVN 935
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 28.1 bits (61), Expect = 9.9 Identities = 31/127 (24%), Positives = 40/127 (31%), Gaps = 8/127 (6%) Frame = +1 Query: 46 YSGKGRNTGGARQHSTRPPPGT-----HQPRWKPGVAEVGVLGIYTDERKERTNHSICQK 210 + G G + GG+ H PG H+P PG D R H Sbjct: 833 HEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRG-------HDHRGPPHEHRGHDG 885 Query: 211 PMHK---HKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCC 381 P H H+ H G SH S N + H CR EN+C Sbjct: 886 PGHGGGGHRGHDGGHSHGGDMS-----------------NRPVCRHFMMKGNCRYENNCA 928 Query: 382 TCTPGLH 402 PG++ Sbjct: 929 FYHPGVN 935
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 28.1 bits (61), Expect = 9.9 Identities = 28/124 (22%), Positives = 38/124 (30%), Gaps = 5/124 (4%) Frame = +1 Query: 46 YSGKGRNTGGARQHSTRPPPGT-----HQPRWKPGVAEVGVLGIYTDERKERTNHSICQK 210 + G G + GG+ H PG H+P PG H Sbjct: 832 HEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPG----------------HRGHDHRGP 875 Query: 211 PMHKHKTHSAGRSHVKGRSLFLSNHLLSSPSSIRSPNTHLQAHRAAASGCRQENSCCTCT 390 P H+H+ H G H S N + H CR EN+C Sbjct: 876 PPHEHRGHDGPGHGGGGHRGHDGGHSHGGDMS----NRPVCRHFMMKGNCRYENNCAFYH 931 Query: 391 PGLH 402 PG++ Sbjct: 932 PGVN 935 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,791,783 Number of Sequences: 219361 Number of extensions: 1817377 Number of successful extensions: 6264 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6258 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
