Clone Name | rbastl42c10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains... | 31 | 0.91 | 2 | CN12L_CAEEL (Q95QU0) CSN12-like protein | 28 | 4.5 | 3 | LPXA_SYNY3 (Q55746) Acyl-[acyl-carrier-protein]--UDP-N-acetylglu... | 28 | 5.9 | 4 | Y148_AERPE (Q9YFV2) UPF0211 protein APE0148 | 28 | 7.7 |
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>NEUM_BUFJA (P08162) Mesotocin-neurophysin MT precursor [Contains: Mesotocin| (MT); Neurophysin MT] Length = 125 Score = 30.8 bits (68), Expect = 0.91 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 133 TPCFSSRKPPINTGPHTHLSKLCCAHDS 216 +PC S RKP N G + S +CC H+S Sbjct: 84 SPCESGRKPCGNNGGNCARSGICCNHES 111
>CN12L_CAEEL (Q95QU0) CSN12-like protein| Length = 413 Score = 28.5 bits (62), Expect = 4.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -2 Query: 135 RTSLFLDSQDLVKPSLFYAFRNCSIPSFQN 46 R ++F +L + SL YAFRNC S N Sbjct: 230 RKAMFDADLNLAEKSLLYAFRNCPADSMSN 259
>LPXA_SYNY3 (Q55746) Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine| O-acyltransferase (EC 2.3.1.129) (UDP-N-acetylglucosamine acyltransferase) Length = 276 Score = 28.1 bits (61), Expect = 5.9 Identities = 9/31 (29%), Positives = 20/31 (64%) Frame = +2 Query: 113 LSKKREVRHVSLVGNRRLTLAHTHISQNCAV 205 +++ E V+ +G+R L +A+ H++ NC + Sbjct: 106 INRATEEGAVTRIGDRNLLMAYAHVAHNCVI 136
>Y148_AERPE (Q9YFV2) UPF0211 protein APE0148| Length = 144 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = -1 Query: 286 RICLFLLN--CCSVYAPLWVIEFISCCHEHSTILR 188 R+C N CS+ A W EF HEH TI++ Sbjct: 86 RVCKIECNGESCSIVASAWGEEFDPSRHEHRTIVK 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,079,830 Number of Sequences: 219361 Number of extensions: 747698 Number of successful extensions: 1591 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1582 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1590 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)